RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, human

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRCA1-223	ENST00000494123	IGKV1-13	P0DP09	117 aa		11.74	□□□□□ -0.53
BRCA1-223	ENST00000494123	FAU	P35544	74 aa	Known RBP	11.74	□□□□□ -0.53
BRCA1-223	ENST00000494123	HILS1	P60008	231 aa		11.74	□□□□□ -0.53
BRCA1-223	ENST00000494123	BAK1	Q16611	211 aa		11.74	□□□□□ -0.53
BRCA1-223	ENST00000494123	SCGB2B2	Q4G0G5	96 aa		11.74	□□□□□ -0.53
BRCA1-223	ENST00000494123	FAAP20	Q6NZ36	180 aa		11.74	□□□□□ -0.53
BRCA1-223	ENST00000494123	DRAM1	Q8N682	238 aa		11.74	□□□□□ -0.53
BRCA1-223	ENST00000494123	ZNF645	Q8N7E2	425 aa		11.74	□□□□□ -0.53
BRCA1-223	ENST00000494123	SLC5A7	Q9GZV3	580 aa		11.74	□□□□□ -0.53
BRCA1-223	ENST00000494123		A0A0A6YYJ9	748 aa		11.73	□□□□□ -0.53
BRCA1-223	ENST00000494123	DNAJC9-AS1	A6NH13	148 aa		11.73	□□□□□ -0.53
BRCA1-223	ENST00000494123		M0R1X1	148 aa		11.73	□□□□□ -0.53
BRCA1-223	ENST00000494123	IGHV4-59	P01825	116 aa		11.73	□□□□□ -0.53
BRCA1-223	ENST00000494123	RAB13	P51153	203 aa		11.73	□□□□□ -0.53
BRCA1-223	ENST00000494123	DYNLT3	P51808	116 aa		11.73	□□□□□ -0.53
BRCA1-223	ENST00000494123	ZNF660	Q6AZW8	331 aa	Predicted RBP	11.73	□□□□□ -0.53
BRCA1-223	ENST00000494123	OR4C16	Q8NGL9	310 aa		11.73	□□□□□ -0.53
BRCA1-223	ENST00000494123	OR56B4	Q8NH76	319 aa		11.73	□□□□□ -0.53
BRCA1-223	ENST00000494123	OR5R1	Q8NH85	324 aa		11.73	□□□□□ -0.53
BRCA1-223	ENST00000494123	MOB3A	Q96BX8	217 aa		11.73	□□□□□ -0.53
BRCA1-223	ENST00000494123	SDHC	Q99643	169 aa	Predicted RBP	11.73	□□□□□ -0.53
BRCA1-223	ENST00000494123	ZNF251	Q9BRH9	671 aa		11.73	□□□□□ -0.53
BRCA1-223	ENST00000494123	MRPL20	Q9BYC9	149 aa	Known RBP	11.73	□□□□□ -0.53
BRCA1-223	ENST00000494123	MCUB	Q9NWR8	336 aa		11.73	□□□□□ -0.53
BRCA1-223	ENST00000494123	SDHAF2	Q9NX18	166 aa		11.73	□□□□□ -0.53
BRCA1-223	ENST00000494123	POMT1	Q9Y6A1	747 aa		11.73	□□□□□ -0.53
BRCA1-223	ENST00000494123	SETD2	Q9BYW2	2564 aa	Predicted RBP	11.72	□□□□□ -0.53
BRCA1-223	ENST00000494123	IL7	P13232	177 aa		11.72	□□□□□ -0.53
BRCA1-223	ENST00000494123	CD40LG	P29965	261 aa		11.72	□□□□□ -0.53
BRCA1-223	ENST00000494123	PPP5C	P53041	499 aa		11.72	□□□□□ -0.53
BRCA1-223	ENST00000494123	KLF9	Q13886	244 aa	Predicted RBP	11.72	□□□□□ -0.53
BRCA1-223	ENST00000494123	LY6E	Q16553	131 aa		11.72	□□□□□ -0.53
BRCA1-223	ENST00000494123	TMEM86B	Q8N661	226 aa		11.72	□□□□□ -0.53
BRCA1-223	ENST00000494123	CAPSL	Q8WWF8	208 aa		11.72	□□□□□ -0.53
BRCA1-223	ENST00000494123	BORCS5	Q969J3	196 aa		11.72	□□□□□ -0.53
BRCA1-223	ENST00000494123	DUX5	Q96PT3	197 aa		11.72	□□□□□ -0.53
BRCA1-223	ENST00000494123	CCDC32	Q9BV29	185 aa		11.72	□□□□□ -0.53
BRCA1-223	ENST00000494123	CCL28	Q9NRJ3	127 aa		11.72	□□□□□ -0.53
BRCA1-223	ENST00000494123	GAB2	Q9UQC2	676 aa		11.72	□□□□□ -0.53
BRCA1-223	ENST00000494123	IGHV3-72	A0A0B4J1Y9	119 aa		11.71	□□□□□ -0.53
BRCA1-223	ENST00000494123	CD24	P25063	80 aa		11.71	□□□□□ -0.53
BRCA1-223	ENST00000494123	HES1	Q14469	280 aa		11.71	□□□□□ -0.53
BRCA1-223	ENST00000494123	SLC9A3R2	Q15599	337 aa		11.71	□□□□□ -0.53
BRCA1-223	ENST00000494123	DRAXIN	Q8NBI3	349 aa	Predicted RBP	11.71	□□□□□ -0.53
BRCA1-223	ENST00000494123	DEDD2	Q8WXF8	326 aa		11.71	□□□□□ -0.53
BRCA1-223	ENST00000494123	PRRT1	Q99946	306 aa		11.71	□□□□□ -0.53
BRCA1-223	ENST00000494123	NABP2	Q9BQ15	211 aa		11.71	□□□□□ -0.53
BRCA1-223	ENST00000494123	FXYD6	Q9H0Q3	95 aa		11.71	□□□□□ -0.53
BRCA1-223	ENST00000494123	ESM1	Q9NQ30	184 aa		11.71	□□□□□ -0.53
BRCA1-223	ENST00000494123	SCP2D1	Q9UJQ7	156 aa		11.71	□□□□□ -0.53
BRCA1-223	ENST00000494123	PITPNC1	Q9UKF7	332 aa		11.71	□□□□□ -0.53
BRCA1-223	ENST00000494123	OR5H14	A6NHG9	310 aa		11.71	□□□□□ -0.54
BRCA1-223	ENST00000494123	SNRNP70	P08621	437 aa	Known RBP	11.71	□□□□□ -0.54
BRCA1-223	ENST00000494123	FAM106CP	P0CH98	169 aa		11.71	□□□□□ -0.54
BRCA1-223	ENST00000494123	LSAMP	Q13449	338 aa		11.71	□□□□□ -0.54
BRCA1-223	ENST00000494123	LPCAT3	Q6P1A2	487 aa		11.71	□□□□□ -0.54
BRCA1-223	ENST00000494123	ZDHHC22	Q8N966	263 aa		11.71	□□□□□ -0.54
BRCA1-223	ENST00000494123	OR51S1	Q8NGJ8	323 aa		11.71	□□□□□ -0.54
BRCA1-223	ENST00000494123	CFHR4	Q92496	578 aa		11.71	□□□□□ -0.54
BRCA1-223	ENST00000494123	HRASLS	Q9HDD0	168 aa		11.71	□□□□□ -0.54
BRCA1-223	ENST00000494123	VPREB3	Q9UKI3	123 aa		11.71	□□□□□ -0.54
BRCA1-223	ENST00000494123	TCF19	Q9Y242	345 aa		11.71	□□□□□ -0.54
BRCA1-223	ENST00000494123	LINC00854	A0A1B0GVQ3	168 aa		11.7	□□□□□ -0.54
BRCA1-223	ENST00000494123	CLDN34	H7C241	214 aa		11.7	□□□□□ -0.54
BRCA1-223	ENST00000494123	PROP1	O75360	226 aa		11.7	□□□□□ -0.54
BRCA1-223	ENST00000494123	VENTX	O95231	258 aa		11.7	□□□□□ -0.54
BRCA1-223	ENST00000494123	IGKV1D-33	P01593	117 aa		11.7	□□□□□ -0.54
BRCA1-223	ENST00000494123	IGKV1-33	P01594	117 aa		11.7	□□□□□ -0.54
BRCA1-223	ENST00000494123	APOA2	P02652	100 aa		11.7	□□□□□ -0.54
BRCA1-223	ENST00000494123	ZNF735	P0CB33	412 aa		11.7	□□□□□ -0.54
BRCA1-223	ENST00000494123	CT45A6	P0DMU7	189 aa		11.7	□□□□□ -0.54
BRCA1-223	ENST00000494123	CT45A5	P0DMU8	189 aa		11.7	□□□□□ -0.54
BRCA1-223	ENST00000494123	CT45A7	P0DMV0	189 aa		11.7	□□□□□ -0.54
BRCA1-223	ENST00000494123	PGAM2	P15259	253 aa		11.7	□□□□□ -0.54
BRCA1-223	ENST00000494123	CD1B	P29016	333 aa		11.7	□□□□□ -0.54
BRCA1-223	ENST00000494123	HABP2	Q14520	560 aa	Predicted RBP	11.7	□□□□□ -0.54
BRCA1-223	ENST00000494123	MSMO1	Q15800	293 aa		11.7	□□□□□ -0.54
BRCA1-223	ENST00000494123	AADACL3	Q5VUY0	350 aa		11.7	□□□□□ -0.54
BRCA1-223	ENST00000494123	GLDN	Q6ZMI3	551 aa	Predicted RBP	11.7	□□□□□ -0.54
BRCA1-223	ENST00000494123	LHFPL1	Q86WI0	220 aa		11.7	□□□□□ -0.54
BRCA1-223	ENST00000494123	ZBTB34	Q8NCN2	500 aa		11.7	□□□□□ -0.54
BRCA1-223	ENST00000494123	TERB2	Q8NHR7	220 aa		11.7	□□□□□ -0.54
BRCA1-223	ENST00000494123	PIFO	Q8TCI5	191 aa		11.7	□□□□□ -0.54
BRCA1-223	ENST00000494123	C5orf30	Q96GV9	206 aa		11.7	□□□□□ -0.54
BRCA1-223	ENST00000494123	AKR1E2	Q96JD6	320 aa		11.7	□□□□□ -0.54
BRCA1-223	ENST00000494123	CHIA	Q9BZP6	476 aa		11.7	□□□□□ -0.54
BRCA1-223	ENST00000494123	CENPX	A8MT69	81 aa		11.69	□□□□□ -0.54
BRCA1-223	ENST00000494123		H7C2Y5	167 aa		11.69	□□□□□ -0.54
BRCA1-223	ENST00000494123	TRIM77	I1YAP6	450 aa		11.69	□□□□□ -0.54
BRCA1-223	ENST00000494123	TNFSF12	O43508	249 aa		11.69	□□□□□ -0.54
BRCA1-223	ENST00000494123	IGLV2-14	P01704	120 aa		11.69	□□□□□ -0.54
BRCA1-223	ENST00000494123	S100G	P29377	79 aa		11.69	□□□□□ -0.54
BRCA1-223	ENST00000494123	MC5R	P33032	325 aa		11.69	□□□□□ -0.54
BRCA1-223	ENST00000494123	THBS3	P49746	956 aa		11.69	□□□□□ -0.54
BRCA1-223	ENST00000494123	UBA52	P62987	128 aa	Known RBP	11.69	□□□□□ -0.54
BRCA1-223	ENST00000494123	IDO2	Q6ZQW0	420 aa		11.69	□□□□□ -0.54
BRCA1-223	ENST00000494123	ZNF818P	Q6ZRF7	136 aa		11.69	□□□□□ -0.54
BRCA1-223	ENST00000494123	KCTD9	Q7L273	389 aa		11.69	□□□□□ -0.54
BRCA1-223	ENST00000494123	THNSL2	Q86YJ6	484 aa		11.69	□□□□□ -0.54
BRCA1-223	ENST00000494123	CMTM1	Q8IZ96	169 aa		11.69	□□□□□ -0.54

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