RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 SH3BGRL3Q9H299 93 aa6.82□□□□□ -1.32
BRCA1-221ENST00000493795 KCNE1BA0A087WTH5 132 aa6.82□□□□□ -1.32
BRCA1-221ENST00000493795 ASPDHA6ND91 283 aa6.82□□□□□ -1.32
BRCA1-221ENST00000493795 C2CD4DB7Z1M9 353 aa6.82□□□□□ -1.32
BRCA1-221ENST00000493795 IGHV4-39P01824 125 aa6.82□□□□□ -1.32
BRCA1-221ENST00000493795 VSIG8P0DPA2 414 aa6.82□□□□□ -1.32
BRCA1-221ENST00000493795 COX6B1P14854 86 aa6.82□□□□□ -1.32
BRCA1-221ENST00000493795 NPPCP23582 126 aa6.82□□□□□ -1.32
BRCA1-221ENST00000493795 C3AR1Q16581 482 aa6.82□□□□□ -1.32
BRCA1-221ENST00000493795 FAM71F2Q6NXP2 309 aa6.82□□□□□ -1.32
BRCA1-221ENST00000493795 GPBAR1Q8TDU6 330 aa6.82□□□□□ -1.32
BRCA1-221ENST00000493795 SDHCQ99643 169 aaPredicted RBP6.82□□□□□ -1.32
BRCA1-221ENST00000493795 YAE1D1Q9NRH1 226 aa6.82□□□□□ -1.32
BRCA1-221ENST00000493795 TRAV12-3A0A0B4J271 114 aa6.81□□□□□ -1.32
BRCA1-221ENST00000493795 APOMO95445 188 aa6.81□□□□□ -1.32
BRCA1-221ENST00000493795 ARL14EPLP0DKL9 152 aa6.81□□□□□ -1.32
BRCA1-221ENST00000493795 SFTPCP11686 197 aa6.81□□□□□ -1.32
BRCA1-221ENST00000493795 EFNB2P52799 333 aa6.81□□□□□ -1.32
BRCA1-221ENST00000493795 HMGA2P52926 109 aa6.81□□□□□ -1.32
BRCA1-221ENST00000493795 GGTLC2Q14390 218 aa6.81□□□□□ -1.32
BRCA1-221ENST00000493795 SLC25A53Q5H9E4 307 aa6.81□□□□□ -1.32
BRCA1-221ENST00000493795 TAF15Q92804 592 aaKnown RBP eCLIP6.81□□□□□ -1.326e-6■□□□□ 11.2
BRCA1-221ENST00000493795 TUBA4BQ9H853 241 aa6.81□□□□□ -1.32
BRCA1-221ENST00000493795 KLK13Q9UKR3 277 aa6.81□□□□□ -1.32
BRCA1-221ENST00000493795 IGHV5-51A0A0C4DH38 117 aa6.81□□□□□ -1.32
BRCA1-221ENST00000493795 CXorf51AA0A1B0GTR3 108 aa6.81□□□□□ -1.32
BRCA1-221ENST00000493795 C9JCJ5 164 aa6.81□□□□□ -1.32
BRCA1-221ENST00000493795 IFNL4K9M1U5 179 aa6.81□□□□□ -1.32
BRCA1-221ENST00000493795 PNLIPP16233 465 aa6.81□□□□□ -1.32
BRCA1-221ENST00000493795 DMRTA1Q5VZB9 504 aa6.81□□□□□ -1.32
BRCA1-221ENST00000493795 DCTN5Q9BTE1 182 aa6.81□□□□□ -1.32
BRCA1-221ENST00000493795 IGHV1OR21-1A0A087WYE8 117 aa6.81□□□□□ -1.32
BRCA1-221ENST00000493795 CTSVO60911 334 aa6.81□□□□□ -1.32
BRCA1-221ENST00000493795 TRIP6Q15654 476 aaKnown RBP6.81□□□□□ -1.32
BRCA1-221ENST00000493795 OR51G1Q8NGK1 321 aa6.81□□□□□ -1.32
BRCA1-221ENST00000493795 PIMREGQ9BSJ6 248 aa6.81□□□□□ -1.32
BRCA1-221ENST00000493795 Q6ZNB5 142 aa6.81□□□□□ -1.32
BRCA1-221ENST00000493795 TMEM252Q8N6L7 170 aa6.81□□□□□ -1.32
BRCA1-221ENST00000493795 CCL13Q99616 98 aa6.81□□□□□ -1.32
BRCA1-221ENST00000493795 LHX9Q9NQ69 397 aa6.81□□□□□ -1.32
BRCA1-221ENST00000493795 TCHHQ07283 1943 aa6.81□□□□□ -1.32
BRCA1-221ENST00000493795 A0A1W2PP11 408 aa6.81□□□□□ -1.32
BRCA1-221ENST00000493795 CD1AP06126 327 aa6.81□□□□□ -1.32
BRCA1-221ENST00000493795 CRYBB3P26998 211 aa6.81□□□□□ -1.32
BRCA1-221ENST00000493795 TMEM249Q2WGJ8 235 aa6.81□□□□□ -1.32
BRCA1-221ENST00000493795 KIAA1644Q3SXP7 199 aa6.81□□□□□ -1.32
BRCA1-221ENST00000493795 ZNF562Q6V9R5 426 aa6.81□□□□□ -1.32
BRCA1-221ENST00000493795 TP53I13Q8NBR0 393 aaPredicted RBP6.81□□□□□ -1.32
BRCA1-221ENST00000493795 KCNS1Q96KK3 526 aa6.81□□□□□ -1.32
BRCA1-221ENST00000493795 ALX4Q9H161 411 aaPredicted RBP6.81□□□□□ -1.32
BRCA1-221ENST00000493795 FLRT3Q9NZU0 649 aa6.81□□□□□ -1.32
BRCA1-221ENST00000493795 MBD1Q9UIS9 605 aaPredicted RBP6.81□□□□□ -1.32
BRCA1-221ENST00000493795 IGHV3-72A0A0B4J1Y9 119 aa6.8□□□□□ -1.32
BRCA1-221ENST00000493795 FOXI3A8MTJ6 420 aaPredicted RBP6.8□□□□□ -1.32
BRCA1-221ENST00000493795 HAX1O00165 279 aa6.8□□□□□ -1.32
BRCA1-221ENST00000493795 HYAL3O43820 417 aaPredicted RBP6.8□□□□□ -1.32
BRCA1-221ENST00000493795 EIF3GO75821 320 aaKnown RBP eCLIP6.8□□□□□ -1.32
BRCA1-221ENST00000493795 SRSF6Q13247 344 aaKnown RBP6.8□□□□□ -1.32
BRCA1-221ENST00000493795 CXorf66Q5JRM2 361 aaPredicted RBP6.8□□□□□ -1.32
BRCA1-221ENST00000493795 ATG4DQ86TL0 474 aaPredicted RBP6.8□□□□□ -1.32
BRCA1-221ENST00000493795 VKORC1L1Q8N0U8 176 aa6.8□□□□□ -1.32
BRCA1-221ENST00000493795 MAFAQ8NHW3 353 aaPredicted RBP6.8□□□□□ -1.32
BRCA1-221ENST00000493795 C5orf30Q96GV9 206 aa6.8□□□□□ -1.32
BRCA1-221ENST00000493795 C18orf15Q96N68 181 aa6.8□□□□□ -1.32
BRCA1-221ENST00000493795 ELF5Q9UKW6 265 aaPredicted RBP6.8□□□□□ -1.32
BRCA1-221ENST00000493795 GRIFINA4D1Z8 144 aa6.8□□□□□ -1.32
BRCA1-221ENST00000493795 CCL21O00585 134 aa6.8□□□□□ -1.32
BRCA1-221ENST00000493795 ADRA2AP08913 450 aa6.8□□□□□ -1.32
BRCA1-221ENST00000493795 ACSF3Q4G176 576 aaPredicted RBP6.8□□□□□ -1.32
BRCA1-221ENST00000493795 FAM209AQ5JX71 171 aa6.8□□□□□ -1.32
BRCA1-221ENST00000493795 FBXW9Q5XUX1 488 aa6.8□□□□□ -1.32
BRCA1-221ENST00000493795 LHX8Q68G74 356 aa6.8□□□□□ -1.32
BRCA1-221ENST00000493795 UNQ9370/PRO34162Q6UXP9 181 aa6.8□□□□□ -1.32
BRCA1-221ENST00000493795 SFXN3Q9BWM7 321 aa6.8□□□□□ -1.32
BRCA1-221ENST00000493795 TMEM222Q9H0R3 208 aa6.8□□□□□ -1.32
BRCA1-221ENST00000493795 FAM90A26D6RGX4 464 aa6.8□□□□□ -1.32
BRCA1-221ENST00000493795 CDC42EP2O14613 210 aa6.8□□□□□ -1.32
BRCA1-221ENST00000493795 IDI2-AS1Q9NZ38 188 aa6.8□□□□□ -1.32
BRCA1-221ENST00000493795 ISG15P05161 165 aa6.8□□□□□ -1.32
BRCA1-221ENST00000493795 CA7P43166 264 aa6.8□□□□□ -1.32
BRCA1-221ENST00000493795 C1orf185Q5T7R7 199 aa6.8□□□□□ -1.32
BRCA1-221ENST00000493795 GOLT1AQ6ZVE7 132 aa6.8□□□□□ -1.32
BRCA1-221ENST00000493795 SLC25A2Q9BXI2 301 aa6.8□□□□□ -1.32
BRCA1-221ENST00000493795 STARD6P59095 220 aa6.79□□□□□ -1.32
BRCA1-221ENST00000493795 PUSL1Q8N0Z8 303 aaKnown RBP6.79□□□□□ -1.32
BRCA1-221ENST00000493795 CXCL16Q9H2A7 254 aa6.79□□□□□ -1.32
BRCA1-221ENST00000493795 ST6GALNAC2Q9UJ37 374 aa6.79□□□□□ -1.32
BRCA1-221ENST00000493795 H0YL77 283 aa6.79□□□□□ -1.32
BRCA1-221ENST00000493795 GPR183P32249 361 aa6.79□□□□□ -1.32
BRCA1-221ENST00000493795 NOVP48745 357 aa6.79□□□□□ -1.32
BRCA1-221ENST00000493795 SRSF4Q08170 494 aaKnown RBP6.79□□□□□ -1.32
BRCA1-221ENST00000493795 VAX1Q5SQQ9 334 aa6.79□□□□□ -1.32
BRCA1-221ENST00000493795 CBLN3Q6UW01 205 aa6.79□□□□□ -1.32
BRCA1-221ENST00000493795 DUX3Q96PT4 197 aa6.79□□□□□ -1.32
BRCA1-221ENST00000493795 MIXL1Q9H2W2 232 aa6.79□□□□□ -1.32
BRCA1-221ENST00000493795 EDA2RQ9HAV5 297 aa6.79□□□□□ -1.32
BRCA1-221ENST00000493795 TMEM74BQ9NUR3 256 aa6.79□□□□□ -1.32
BRCA1-221ENST00000493795 GGTLC3B5MD39 225 aa6.79□□□□□ -1.32
BRCA1-221ENST00000493795 C21orf140B9A014 251 aa6.79□□□□□ -1.32
BRCA1-221ENST00000493795 APOHP02749 345 aaPredicted RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms