RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 CD200R1LQ6Q8B3 271 aa12.86□□□□□ -0.35
PTPRU-208ENST00000493601 PPP1R27Q86WC6 154 aa12.86□□□□□ -0.35
PTPRU-208ENST00000493601 DLX4Q92988 240 aaPredicted RBP12.86□□□□□ -0.35
PTPRU-208ENST00000493601 ASCL2Q99929 193 aa12.86□□□□□ -0.35
PTPRU-208ENST00000493601 HDHD3Q9BSH5 251 aaPredicted RBP12.86□□□□□ -0.35
PTPRU-208ENST00000493601 OR1A1Q9P1Q5 309 aa12.86□□□□□ -0.35
PTPRU-208ENST00000493601 METTL1Q9UBP6 276 aaKnown RBP12.86□□□□□ -0.35
PTPRU-208ENST00000493601 HSF4Q9ULV5 492 aa12.86□□□□□ -0.35
PTPRU-208ENST00000493601 FCN1O00602 326 aa12.85□□□□□ -0.35
PTPRU-208ENST00000493601 SLC17A2O00624 439 aa12.85□□□□□ -0.35
PTPRU-208ENST00000493601 SOCS1O15524 211 aa12.85□□□□□ -0.35
PTPRU-208ENST00000493601 ARL6IP5O75915 188 aa12.85□□□□□ -0.35
PTPRU-208ENST00000493601 SPDEFO95238 335 aa12.85□□□□□ -0.35
PTPRU-208ENST00000493601 CPEP16870 476 aa12.85□□□□□ -0.35
PTPRU-208ENST00000493601 CD40LGP29965 261 aa12.85□□□□□ -0.35
PTPRU-208ENST00000493601 SLURP1P55000 103 aa12.85□□□□□ -0.35
PTPRU-208ENST00000493601 RAB11BQ15907 218 aa12.85□□□□□ -0.35
PTPRU-208ENST00000493601 AKIRIN2Q53H80 203 aa12.85□□□□□ -0.35
PTPRU-208ENST00000493601 FAM89BQ8N5H3 189 aa12.85□□□□□ -0.35
PTPRU-208ENST00000493601 CASTOR1Q8WTX7 329 aa12.85□□□□□ -0.35
PTPRU-208ENST00000493601 TMEM203Q969S6 136 aa12.85□□□□□ -0.35
PTPRU-208ENST00000493601 PTX4Q96A99 478 aa12.85□□□□□ -0.35
PTPRU-208ENST00000493601 TSNAXQ99598 290 aaKnown RBP12.85□□□□□ -0.35
PTPRU-208ENST00000493601 C11orf54Q9H0W9 315 aaPredicted RBP12.85□□□□□ -0.35
PTPRU-208ENST00000493601 ZNF221Q9UK13 617 aa12.85□□□□□ -0.35
PTPRU-208ENST00000493601 NUBP2Q9Y5Y2 271 aa12.85□□□□□ -0.35
PTPRU-208ENST00000493601 RYR3Q15413 4870 aa12.85□□□□□ -0.35
PTPRU-208ENST00000493601 IGHV4OR15-8A0A075B7B6 117 aa12.84□□□□□ -0.35
PTPRU-208ENST00000493601 A0A087WW49 117 aa12.84□□□□□ -0.35
PTPRU-208ENST00000493601 OR8U9P0C7N5 309 aa12.84□□□□□ -0.35
PTPRU-208ENST00000493601 EGR2P11161 476 aaPredicted RBP12.84□□□□□ -0.35
PTPRU-208ENST00000493601 PSMA1P25786 263 aaKnown RBP12.84□□□□□ -0.35
PTPRU-208ENST00000493601 RANBP1P43487 201 aa12.84□□□□□ -0.35
PTPRU-208ENST00000493601 IRF3Q14653 427 aa12.84□□□□□ -0.35
PTPRU-208ENST00000493601 PSG5Q15238 335 aa12.84□□□□□ -0.35
PTPRU-208ENST00000493601 TRAM1Q15629 374 aa12.84□□□□□ -0.35
PTPRU-208ENST00000493601 UNQ5815/PRO19632Q6UWF5 114 aa12.84□□□□□ -0.35
PTPRU-208ENST00000493601 ZNF562Q6V9R5 426 aa12.84□□□□□ -0.35
PTPRU-208ENST00000493601 OR6Q1Q8NGQ2 317 aa12.84□□□□□ -0.35
PTPRU-208ENST00000493601 FLYWCH2Q96CP2 140 aaKnown RBP12.84□□□□□ -0.35
PTPRU-208ENST00000493601 SLA2Q9H6Q3 261 aa12.84□□□□□ -0.35
PTPRU-208ENST00000493601 Q9N2K0 584 aa12.84□□□□□ -0.35
PTPRU-208ENST00000493601 GAB2Q9UQC2 676 aa12.84□□□□□ -0.35
PTPRU-208ENST00000493601 FOXI3A8MTJ6 420 aaPredicted RBP12.83□□□□□ -0.36
PTPRU-208ENST00000493601 C3orf84H3BNL1 204 aa12.83□□□□□ -0.36
PTPRU-208ENST00000493601 ARPC1BO15143 372 aaKnown RBP12.83□□□□□ -0.36
PTPRU-208ENST00000493601 CA2P00918 260 aa12.83□□□□□ -0.36
PTPRU-208ENST00000493601 APOA2P02652 100 aa12.83□□□□□ -0.36
PTPRU-208ENST00000493601 HSPB1P04792 205 aaKnown RBP12.83□□□□□ -0.36
PTPRU-208ENST00000493601 TFAP2AP05549 437 aa12.83□□□□□ -0.36
PTPRU-208ENST00000493601 HSMCR30P0CW71 290 aa12.83□□□□□ -0.36
PTPRU-208ENST00000493601 TPPP2P59282 170 aa12.83□□□□□ -0.36
PTPRU-208ENST00000493601 PITPNAQ00169 270 aa12.83□□□□□ -0.36
PTPRU-208ENST00000493601 ACSM6Q6P461 480 aa12.83□□□□□ -0.36
PTPRU-208ENST00000493601 PDPNQ86YL7 162 aa12.83□□□□□ -0.36
PTPRU-208ENST00000493601 DRAXINQ8NBI3 349 aaPredicted RBP12.83□□□□□ -0.36
PTPRU-208ENST00000493601 ARPC1AQ92747 370 aa12.83□□□□□ -0.36
PTPRU-208ENST00000493601 CLCC1Q96S66 551 aa12.83□□□□□ -0.36
PTPRU-208ENST00000493601 GFI1Q99684 422 aa12.83□□□□□ -0.36
PTPRU-208ENST00000493601 CMSS1Q9BQ75 279 aaKnown RBP12.83□□□□□ -0.36
PTPRU-208ENST00000493601 FAM103A1Q9BTL3 118 aaKnown RBP12.83□□□□□ -0.36
PTPRU-208ENST00000493601 TPSG1Q9NRR2 321 aa12.83□□□□□ -0.36
PTPRU-208ENST00000493601 IGHV3-11P01762 117 aa12.82□□□□□ -0.36
PTPRU-208ENST00000493601 IGKV1-16P04430 117 aa12.82□□□□□ -0.36
PTPRU-208ENST00000493601 SCTP09683 121 aa12.82□□□□□ -0.36
PTPRU-208ENST00000493601 GP9P14770 177 aa12.82□□□□□ -0.36
PTPRU-208ENST00000493601 SPNP16150 400 aa12.82□□□□□ -0.36
PTPRU-208ENST00000493601 VEGFCP49767 419 aa12.82□□□□□ -0.36
PTPRU-208ENST00000493601 RPS25P62851 125 aaKnown RBP12.82□□□□□ -0.36
PTPRU-208ENST00000493601 TPBGQ13641 420 aa12.82□□□□□ -0.36
PTPRU-208ENST00000493601 TMEM91Q6ZNR0 172 aa12.82□□□□□ -0.36
PTPRU-208ENST00000493601 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.82□□□□□ -0.36
PTPRU-208ENST00000493601 LFNGQ8NES3 379 aa12.82□□□□□ -0.36
PTPRU-208ENST00000493601 OR56B1Q8NGI3 324 aa12.82□□□□□ -0.36
PTPRU-208ENST00000493601 ARHGAP5-AS1Q96IT6 56 aa12.82□□□□□ -0.36
PTPRU-208ENST00000493601 MS4A10Q96PG2 267 aa12.82□□□□□ -0.36
PTPRU-208ENST00000493601 PECRQ9BY49 303 aa12.82□□□□□ -0.36
PTPRU-208ENST00000493601 TPRKBQ9Y3C4 175 aa12.82□□□□□ -0.36
PTPRU-208ENST00000493601 AK6Q9Y3D8 172 aaKnown RBP12.82□□□□□ -0.36
PTPRU-208ENST00000493601 TRGV3P03979 118 aa12.81□□□□□ -0.36
PTPRU-208ENST00000493601 SERPINB10P48595 397 aa12.81□□□□□ -0.36
PTPRU-208ENST00000493601 RPS16P62249 146 aaKnown RBP12.81□□□□□ -0.36
PTPRU-208ENST00000493601 MRPS15P82914 257 aaKnown RBP12.81□□□□□ -0.36
PTPRU-208ENST00000493601 MLLT11Q13015 90 aaPredicted RBP12.81□□□□□ -0.36
PTPRU-208ENST00000493601 ZNF383Q8NA42 475 aa12.81□□□□□ -0.36
PTPRU-208ENST00000493601 GRPEL2Q8TAA5 225 aa12.81□□□□□ -0.36
PTPRU-208ENST00000493601 FAM3DQ96BQ1 224 aa12.81□□□□□ -0.36
PTPRU-208ENST00000493601 OR4C12Q96R67 309 aa12.81□□□□□ -0.36
PTPRU-208ENST00000493601 RDH8Q9NYR8 311 aa12.81□□□□□ -0.36
PTPRU-208ENST00000493601 IGKV1-6A0A0C4DH72 117 aa12.8□□□□□ -0.36
PTPRU-208ENST00000493601 TRDCB7Z8K6 153 aa12.8□□□□□ -0.36
PTPRU-208ENST00000493601 M0R1X1 148 aa12.8□□□□□ -0.36
PTPRU-208ENST00000493601 RGS10O43665 173 aa12.8□□□□□ -0.36
PTPRU-208ENST00000493601 SLC25A17O43808 307 aa12.8□□□□□ -0.36
PTPRU-208ENST00000493601 PROP1O75360 226 aa12.8□□□□□ -0.36
PTPRU-208ENST00000493601 CALRP27797 417 aaKnown RBP12.8□□□□□ -0.36
PTPRU-208ENST00000493601 TMEM50BP56557 158 aa12.8□□□□□ -0.36
PTPRU-208ENST00000493601 FXYD3Q14802 87 aa12.8□□□□□ -0.36
PTPRU-208ENST00000493601 OR4A4PQ8NGN8 299 aa12.8□□□□□ -0.36
PTPRU-208ENST00000493601 RCHY1Q96PM5 261 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms