RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 SSSCA1O60232 199 aa7.55□□□□□ -1.2
SMARCC1-208ENST00000492896 PITX3O75364 302 aa7.55□□□□□ -1.2
SMARCC1-208ENST00000492896 FSTL3O95633 263 aa7.55□□□□□ -1.2
SMARCC1-208ENST00000492896 IGKV1-5P01602 117 aa7.55□□□□□ -1.2
SMARCC1-208ENST00000492896 DAOP14920 347 aa7.55□□□□□ -1.2
SMARCC1-208ENST00000492896 NFYBP25208 207 aa7.55□□□□□ -1.2
SMARCC1-208ENST00000492896 POLR2GP62487 172 aaKnown RBP eCLIP7.55□□□□□ -1.2
SMARCC1-208ENST00000492896 ZNF816Q0VGE8 651 aaPredicted RBP7.55□□□□□ -1.2
SMARCC1-208ENST00000492896 ZNF273Q14593 569 aa7.55□□□□□ -1.2
SMARCC1-208ENST00000492896 GPR157Q5UAW9 335 aa7.55□□□□□ -1.2
SMARCC1-208ENST00000492896 LYPD2Q6UXB3 125 aa7.55□□□□□ -1.2
SMARCC1-208ENST00000492896 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.55□□□□□ -1.2
SMARCC1-208ENST00000492896 H1FXQ92522 213 aaKnown RBP7.55□□□□□ -1.2
SMARCC1-208ENST00000492896 ZNF714Q96N38 554 aa7.55□□□□□ -1.2
SMARCC1-208ENST00000492896 C11orf1Q9H5F2 150 aa7.55□□□□□ -1.2
SMARCC1-208ENST00000492896 CYTL1Q9NRR1 136 aa7.55□□□□□ -1.2
SMARCC1-208ENST00000492896 CACNG5Q9UF02 275 aa7.55□□□□□ -1.2
SMARCC1-208ENST00000492896 FBXL17Q9UF56 701 aa7.55□□□□□ -1.2
SMARCC1-208ENST00000492896 RPUSD1Q9UJJ7 312 aaKnown RBP7.55□□□□□ -1.2
SMARCC1-208ENST00000492896 GAB2Q9UQC2 676 aa7.55□□□□□ -1.2
SMARCC1-208ENST00000492896 LAMP3Q9UQV4 416 aa7.55□□□□□ -1.2
SMARCC1-208ENST00000492896 MMP24Q9Y5R2 645 aa7.55□□□□□ -1.2
SMARCC1-208ENST00000492896 C17orf98A8MV24 154 aa7.54□□□□□ -1.2
SMARCC1-208ENST00000492896 B8ZZF3 427 aa7.54□□□□□ -1.2
SMARCC1-208ENST00000492896 DVL1O14640 695 aa7.54□□□□□ -1.2
SMARCC1-208ENST00000492896 RAMP3O60896 148 aa7.54□□□□□ -1.2
SMARCC1-208ENST00000492896 FCN3O75636 299 aa7.54□□□□□ -1.2
SMARCC1-208ENST00000492896 S1PR2O95136 353 aa7.54□□□□□ -1.2
SMARCC1-208ENST00000492896 NXPH3O95157 252 aa7.54□□□□□ -1.2
SMARCC1-208ENST00000492896 IGHV2-70P01814 119 aa7.54□□□□□ -1.2
SMARCC1-208ENST00000492896 DUTP33316 252 aaKnown RBP7.54□□□□□ -1.2
SMARCC1-208ENST00000492896 KIR2DS2P43631 304 aa7.54□□□□□ -1.2
SMARCC1-208ENST00000492896 GNG10P50151 68 aa7.54□□□□□ -1.2
SMARCC1-208ENST00000492896 ID3Q02535 119 aa7.54□□□□□ -1.2
SMARCC1-208ENST00000492896 CXorf66Q5JRM2 361 aaPredicted RBP7.54□□□□□ -1.2
SMARCC1-208ENST00000492896 DTX2Q86UW9 622 aa7.54□□□□□ -1.2
SMARCC1-208ENST00000492896 OR2C3Q8N628 320 aa7.54□□□□□ -1.2
SMARCC1-208ENST00000492896 ZNF439Q8NDP4 499 aa7.54□□□□□ -1.2
SMARCC1-208ENST00000492896 CD300LFQ8TDQ1 290 aa7.54□□□□□ -1.2
SMARCC1-208ENST00000492896 PCNPQ8WW12 178 aaKnown RBP7.54□□□□□ -1.2
SMARCC1-208ENST00000492896 NEU4Q8WWR8 484 aaPredicted RBP7.54□□□□□ -1.2
SMARCC1-208ENST00000492896 LEAP2Q969E1 77 aa7.54□□□□□ -1.2
SMARCC1-208ENST00000492896 RAB39BQ96DA2 213 aa7.54□□□□□ -1.2
SMARCC1-208ENST00000492896 SLC25A31Q9H0C2 315 aa7.54□□□□□ -1.2
SMARCC1-208ENST00000492896 MAGT1Q9H0U3 335 aa7.54□□□□□ -1.2
SMARCC1-208ENST00000492896 SLC25A32Q9H2D1 315 aa7.54□□□□□ -1.2
SMARCC1-208ENST00000492896 SAA2-SAA4A0A096LPE2 208 aa7.53□□□□□ -1.2
SMARCC1-208ENST00000492896 TRBV23-1A0A0A0MS06 115 aa7.53□□□□□ -1.2
SMARCC1-208ENST00000492896 LINC00473A8K010 186 aa7.53□□□□□ -1.2
SMARCC1-208ENST00000492896 FAM90A26D6RGX4 464 aa7.53□□□□□ -1.2
SMARCC1-208ENST00000492896 LYNX1G3V0Z9 82 aa7.53□□□□□ -1.2
SMARCC1-208ENST00000492896 RAB29O14966 203 aa7.53□□□□□ -1.2
SMARCC1-208ENST00000492896 RBFOX2O43251 390 aaKnown RBP eCLIP7.53□□□□□ -1.2
SMARCC1-208ENST00000492896 IGHV3-7P01780 117 aa7.53□□□□□ -1.2
SMARCC1-208ENST00000492896 GAPDHP04406 335 aaKnown RBP7.53□□□□□ -1.2
SMARCC1-208ENST00000492896 NMBP08949 121 aa7.53□□□□□ -1.2
SMARCC1-208ENST00000492896 P0C879 139 aa7.53□□□□□ -1.2
SMARCC1-208ENST00000492896 SAA2P0DJI9 122 aaPredicted RBP7.53□□□□□ -1.2
SMARCC1-208ENST00000492896 LYNX1P0DP58 116 aa7.53□□□□□ -1.2
SMARCC1-208ENST00000492896 CCL3L1P16619 93 aa7.53□□□□□ -1.2
SMARCC1-208ENST00000492896 COL8A2P25067 703 aa7.53□□□□□ -1.2
SMARCC1-208ENST00000492896 THBS3P49746 956 aa7.53□□□□□ -1.2
SMARCC1-208ENST00000492896 CAV2P51636 162 aa7.53□□□□□ -1.2
SMARCC1-208ENST00000492896 ZNF134P52741 427 aa7.53□□□□□ -1.2
SMARCC1-208ENST00000492896 TMEM33P57088 247 aa7.53□□□□□ -1.2
SMARCC1-208ENST00000492896 MRPS11P82912 194 aaKnown RBP7.53□□□□□ -1.2
SMARCC1-208ENST00000492896 EWSR1Q01844 656 aaKnown RBP eCLIP7.53□□□□□ -1.2
SMARCC1-208ENST00000492896 IZUMO4Q1ZYL8 232 aa7.53□□□□□ -1.2
SMARCC1-208ENST00000492896 RPL39P5Q59GN2 51 aa7.53□□□□□ -1.2
SMARCC1-208ENST00000492896 CT45A1Q5HYN5 189 aa7.53□□□□□ -1.2
SMARCC1-208ENST00000492896 NCR3LG1Q68D85 454 aa7.53□□□□□ -1.2
SMARCC1-208ENST00000492896 TMEM200BQ69YZ2 307 aa7.53□□□□□ -1.2
SMARCC1-208ENST00000492896 RPL7L1Q6DKI1 246 aaKnown RBP7.53□□□□□ -1.2
SMARCC1-208ENST00000492896 HEPN1Q6WQI6 88 aa7.53□□□□□ -1.2
SMARCC1-208ENST00000492896 COMMD7Q86VX2 200 aa7.53□□□□□ -1.2
SMARCC1-208ENST00000492896 BAP18Q8IXM2 172 aa7.53□□□□□ -1.2
SMARCC1-208ENST00000492896 PDZD9Q8IXQ8 264 aa7.53□□□□□ -1.2
SMARCC1-208ENST00000492896 LYG1Q8N1E2 194 aa7.53□□□□□ -1.2
SMARCC1-208ENST00000492896 CT45A3Q8NHU0 189 aa7.53□□□□□ -1.2
SMARCC1-208ENST00000492896 TIMD4Q96H15 378 aa7.53□□□□□ -1.2
SMARCC1-208ENST00000492896 ADTRPQ96IZ2 230 aa7.53□□□□□ -1.2
SMARCC1-208ENST00000492896 FAM210AQ96ND0 272 aa7.53□□□□□ -1.2
SMARCC1-208ENST00000492896 RAB40CQ96S21 281 aa7.53□□□□□ -1.2
SMARCC1-208ENST00000492896 SMIM3Q9BZL3 60 aa7.53□□□□□ -1.2
SMARCC1-208ENST00000492896 LYRM2Q9NU23 88 aaPredicted RBP7.53□□□□□ -1.2
SMARCC1-208ENST00000492896 COA4Q9NYJ1 87 aa7.53□□□□□ -1.2
SMARCC1-208ENST00000492896 PRELID3BQ9Y3B1 194 aa7.53□□□□□ -1.2
SMARCC1-208ENST00000492896 AUP1Q9Y679 476 aa7.53□□□□□ -1.2
SMARCC1-208ENST00000492896 TPRP12270 2363 aaKnown RBP7.53□□□□□ -1.2
SMARCC1-208ENST00000492896 ZZEF1O43149 2961 aa7.52□□□□□ -1.21
SMARCC1-208ENST00000492896 ABCA4P78363 2273 aa7.52□□□□□ -1.21
SMARCC1-208ENST00000492896 BORCS7-ASMTA0A0B4J1R7 106 aa7.52□□□□□ -1.21
SMARCC1-208ENST00000492896 A0A1W2PPE3 182 aa7.52□□□□□ -1.21
SMARCC1-208ENST00000492896 IGSF23A1L1A6 192 aa7.52□□□□□ -1.21
SMARCC1-208ENST00000492896 FAM24AA6NFZ4 105 aa7.52□□□□□ -1.21
SMARCC1-208ENST00000492896 C19orf84I3L1E1 186 aa7.52□□□□□ -1.21
SMARCC1-208ENST00000492896 TOR1AO14656 332 aa7.52□□□□□ -1.21
SMARCC1-208ENST00000492896 FCGR3BO75015 233 aa7.52□□□□□ -1.21
SMARCC1-208ENST00000492896 MED6O75586 246 aa7.52□□□□□ -1.21
SMARCC1-208ENST00000492896 MMP23AO75900 390 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms