RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	ZNF251	Q9BRH9	671 aa		3.97	□□□□□ -1.77
SEC13-219	ENST00000492602	CST11	Q9H112	138 aa		3.97	□□□□□ -1.77
SEC13-219	ENST00000492602	RIMS4	Q9H426	269 aa	Predicted RBP	3.97	□□□□□ -1.77
SEC13-219	ENST00000492602	IFT22	Q9H7X7	185 aa		3.97	□□□□□ -1.77
SEC13-219	ENST00000492602	CHMP1A	Q9HD42	196 aa	Predicted RBP	3.97	□□□□□ -1.77
SEC13-219	ENST00000492602	AMBN	Q9NP70	447 aa		3.97	□□□□□ -1.77
SEC13-219	ENST00000492602	MRPS18A	Q9NVS2	196 aa	Known RBP	3.97	□□□□□ -1.77
SEC13-219	ENST00000492602	SMPD3	Q9NY59	655 aa	Predicted RBP	3.97	□□□□□ -1.77
SEC13-219	ENST00000492602	SCN3B	Q9NY72	215 aa		3.97	□□□□□ -1.77
SEC13-219	ENST00000492602	IL36G	Q9NZH8	169 aa		3.97	□□□□□ -1.77
SEC13-219	ENST00000492602	ZNF581	Q9P0T4	197 aa		3.97	□□□□□ -1.77
SEC13-219	ENST00000492602	KIF25	Q9UIL4	384 aa		3.97	□□□□□ -1.77
SEC13-219	ENST00000492602	ADAM30	Q9UKF2	790 aa		3.97	□□□□□ -1.77
SEC13-219	ENST00000492602	RNF150	Q9ULK6	438 aa		3.97	□□□□□ -1.77
SEC13-219	ENST00000492602	MGAT4A	Q9UM21	535 aa		3.97	□□□□□ -1.77
SEC13-219	ENST00000492602	PSG11	Q9UQ72	335 aa		3.97	□□□□□ -1.77
SEC13-219	ENST00000492602	PEX16	Q9Y5Y5	336 aa		3.97	□□□□□ -1.77
SEC13-219	ENST00000492602	TRAV39	A0A0B4J263	110 aa		3.96	□□□□□ -1.78
SEC13-219	ENST00000492602	IGKV1-12	A0A0C4DH73	117 aa		3.96	□□□□□ -1.78
SEC13-219	ENST00000492602	ANKRD34B	A5PLL1	514 aa		3.96	□□□□□ -1.78
SEC13-219	ENST00000492602	FAM90A7P	A6NKC0	464 aa		3.96	□□□□□ -1.78
SEC13-219	ENST00000492602	KRTAP29-1	A8MX34	341 aa	Predicted RBP	3.96	□□□□□ -1.78
SEC13-219	ENST00000492602	FAM90A23P	A8MXZ1	464 aa		3.96	□□□□□ -1.78
SEC13-219	ENST00000492602		J3QRE1	110 aa		3.96	□□□□□ -1.78
SEC13-219	ENST00000492602	UBE2C	O00762	179 aa		3.96	□□□□□ -1.78
SEC13-219	ENST00000492602	HSD17B6	O14756	317 aa		3.96	□□□□□ -1.78
SEC13-219	ENST00000492602	MYL12B	O14950	172 aa		3.96	□□□□□ -1.78
SEC13-219	ENST00000492602	CRTAP	O75718	401 aa	Predicted RBP	3.96	□□□□□ -1.78
SEC13-219	ENST00000492602	CDRT1	O95170	752 aa		3.96	□□□□□ -1.78
SEC13-219	ENST00000492602	IGKV1D-12	P01611	117 aa		3.96	□□□□□ -1.78
SEC13-219	ENST00000492602	GSTP1	P09211	210 aa	Known RBP	3.96	□□□□□ -1.78
SEC13-219	ENST00000492602	MC5R	P33032	325 aa		3.96	□□□□□ -1.78
SEC13-219	ENST00000492602	SMCP	P49901	116 aa	Predicted RBP	3.96	□□□□□ -1.78
SEC13-219	ENST00000492602	GNG10	P50151	68 aa		3.96	□□□□□ -1.78
SEC13-219	ENST00000492602	RBM11	P57052	281 aa	Known RBP	3.96	□□□□□ -1.78
SEC13-219	ENST00000492602	TPPP2	P59282	170 aa		3.96	□□□□□ -1.78
SEC13-219	ENST00000492602	PAX5	Q02548	391 aa		3.96	□□□□□ -1.78
SEC13-219	ENST00000492602	ZSCAN26	Q16670	478 aa		3.96	□□□□□ -1.78
SEC13-219	ENST00000492602		Q499Y3	187 aa		3.96	□□□□□ -1.78
SEC13-219	ENST00000492602	NHLRC3	Q5JS37	347 aa		3.96	□□□□□ -1.78
SEC13-219	ENST00000492602	C6orf141	Q5SZD1	244 aa		3.96	□□□□□ -1.78
SEC13-219	ENST00000492602	GLT8D1	Q68CQ7	371 aa		3.96	□□□□□ -1.78
SEC13-219	ENST00000492602	AWAT2	Q6E213	333 aa		3.96	□□□□□ -1.78
SEC13-219	ENST00000492602		Q6P435	159 aa		3.96	□□□□□ -1.78
SEC13-219	ENST00000492602	ZNF554	Q86TJ5	538 aa		3.96	□□□□□ -1.78
SEC13-219	ENST00000492602	NR2C2AP	Q86WQ0	139 aa		3.96	□□□□□ -1.78
SEC13-219	ENST00000492602	UBE2DNL	Q8IWF7	75 aa		3.96	□□□□□ -1.78
SEC13-219	ENST00000492602	IZUMO1	Q8IYV9	350 aa		3.96	□□□□□ -1.78
SEC13-219	ENST00000492602	C8orf59	Q8N0T1	100 aa	Predicted RBP	3.96	□□□□□ -1.78
SEC13-219	ENST00000492602	PQLC1	Q8N2U9	271 aa		3.96	□□□□□ -1.78
SEC13-219	ENST00000492602	PACRGL	Q8N7B6	248 aa		3.96	□□□□□ -1.78
SEC13-219	ENST00000492602	STPG3	Q8N7X2	389 aa		3.96	□□□□□ -1.78
SEC13-219	ENST00000492602	OR52I1	Q8NGK6	324 aa		3.96	□□□□□ -1.78
SEC13-219	ENST00000492602	OR10AC1	Q8NH08	325 aa		3.96	□□□□□ -1.78
SEC13-219	ENST00000492602	KCNG3	Q8TAE7	436 aa		3.96	□□□□□ -1.78
SEC13-219	ENST00000492602	DYNLRB2	Q8TF09	96 aa		3.96	□□□□□ -1.78
SEC13-219	ENST00000492602	CCDC107	Q8WV48	283 aa		3.96	□□□□□ -1.78
SEC13-219	ENST00000492602	GHSR	Q92847	366 aa		3.96	□□□□□ -1.78
SEC13-219	ENST00000492602	KIRREL1	Q96J84	757 aa		3.96	□□□□□ -1.78
SEC13-219	ENST00000492602	ZNF184	Q99676	751 aa	Predicted RBP	3.96	□□□□□ -1.78
SEC13-219	ENST00000492602	PDCD1LG2	Q9BQ51	273 aa		3.96	□□□□□ -1.78
SEC13-219	ENST00000492602	UQCC2	Q9BRT2	126 aa		3.96	□□□□□ -1.78
SEC13-219	ENST00000492602	URM1	Q9BTM9	101 aa	Known RBP	3.96	□□□□□ -1.78
SEC13-219	ENST00000492602	PPIL3	Q9H2H8	161 aa	Known RBP	3.96	□□□□□ -1.78
SEC13-219	ENST00000492602	LINC00574	Q9H8X3	128 aa		3.96	□□□□□ -1.78
SEC13-219	ENST00000492602	ISG20L2	Q9H9L3	353 aa	Known RBP	3.96	□□□□□ -1.78
SEC13-219	ENST00000492602	S100A14	Q9HCY8	104 aa		3.96	□□□□□ -1.78
SEC13-219	ENST00000492602	FGF20	Q9NP95	211 aa	Predicted RBP	3.96	□□□□□ -1.78
SEC13-219	ENST00000492602	OR2S2	Q9NQN1	319 aa		3.96	□□□□□ -1.78
SEC13-219	ENST00000492602	IGHV7-81	A0A0B4J1V7	117 aa		3.95	□□□□□ -1.78
SEC13-219	ENST00000492602	TRAV24	A0A0B4J272	114 aa		3.95	□□□□□ -1.78
SEC13-219	ENST00000492602	TMEM238L	A0A1B0GVL6	79 aa		3.95	□□□□□ -1.78
SEC13-219	ENST00000492602		A0A1W2PPE3	182 aa		3.95	□□□□□ -1.78
SEC13-219	ENST00000492602	ZNF736	B4DX44	427 aa	Predicted RBP	3.95	□□□□□ -1.78
SEC13-219	ENST00000492602	NPIPB11	E5RHQ5	1161 aa		3.95	□□□□□ -1.78
SEC13-219	ENST00000492602		H3BNX3	289 aa		3.95	□□□□□ -1.78
SEC13-219	ENST00000492602	GEMIN2	O14893	280 aa	Known RBP	3.95	□□□□□ -1.78
SEC13-219	ENST00000492602	DEFB4A	O15263	64 aa		3.95	□□□□□ -1.78
SEC13-219	ENST00000492602	ST8SIA5	O15466	376 aa		3.95	□□□□□ -1.78
SEC13-219	ENST00000492602	OGG1	O15527	345 aa		3.95	□□□□□ -1.78
SEC13-219	ENST00000492602	GPX5	O75715	221 aa		3.95	□□□□□ -1.78
SEC13-219	ENST00000492602	BPNT1	O95861	308 aa		3.95	□□□□□ -1.78
SEC13-219	ENST00000492602	IFNA21	P01568	189 aa		3.95	□□□□□ -1.78
SEC13-219	ENST00000492602	IFNA17	P01571	189 aa		3.95	□□□□□ -1.78
SEC13-219	ENST00000492602	SMR3B	P02814	79 aa	Predicted RBP	3.95	□□□□□ -1.78
SEC13-219	ENST00000492602	MT-ND4	P03905	459 aa		3.95	□□□□□ -1.78
SEC13-219	ENST00000492602	BLVRB	P30043	206 aa	Predicted RBP	3.95	□□□□□ -1.78
SEC13-219	ENST00000492602	XG	P55808	180 aa		3.95	□□□□□ -1.78
SEC13-219	ENST00000492602	NANOS3	P60323	173 aa	Known RBP	3.95	□□□□□ -1.78
SEC13-219	ENST00000492602	ACTB	P60709	375 aa		3.95	□□□□□ -1.78
SEC13-219	ENST00000492602	ZNF816	Q0VGE8	651 aa	Predicted RBP	3.95	□□□□□ -1.78
SEC13-219	ENST00000492602	ST3GAL4	Q11206	333 aa		3.95	□□□□□ -1.78
SEC13-219	ENST00000492602	CDK5R1	Q15078	307 aa		3.95	□□□□□ -1.78
SEC13-219	ENST00000492602	TRAM1	Q15629	374 aa		3.95	□□□□□ -1.78
SEC13-219	ENST00000492602	SYT6	Q5T7P8	510 aa	Predicted RBP	3.95	□□□□□ -1.78
SEC13-219	ENST00000492602	RAB12	Q6IQ22	244 aa		3.95	□□□□□ -1.78
SEC13-219	ENST00000492602	LIN54	Q6MZP7	749 aa		3.95	□□□□□ -1.78
SEC13-219	ENST00000492602	GLIPR1L1	Q6UWM5	242 aa		3.95	□□□□□ -1.78
SEC13-219	ENST00000492602	ASCL4	Q6XD76	172 aa		3.95	□□□□□ -1.78
SEC13-219	ENST00000492602	C5orf24	Q7Z6I8	188 aa		3.95	□□□□□ -1.78

Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms