RNA–Protein interactions for RNA: ENST00000492571.1

TNFRSF9-203, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-203ENST00000492571 SNAPC3Q92966 411 aa7.41□□□□□ -1.22
TNFRSF9-203ENST00000492571 TMEM68Q96MH6 324 aa7.41□□□□□ -1.22
TNFRSF9-203ENST00000492571 TSNAXQ99598 290 aaKnown RBP7.41□□□□□ -1.22
TNFRSF9-203ENST00000492571 NEURL2Q9BR09 285 aa7.41□□□□□ -1.22
TNFRSF9-203ENST00000492571 ISG20L2Q9H9L3 353 aaKnown RBP7.41□□□□□ -1.22
TNFRSF9-203ENST00000492571 EXOGQ9Y2C4 368 aaKnown RBP7.41□□□□□ -1.22
TNFRSF9-203ENST00000492571 AP4S1Q9Y587 144 aa7.41□□□□□ -1.22
TNFRSF9-203ENST00000492571 UBE2QL1A1L167 161 aa7.4□□□□□ -1.22
TNFRSF9-203ENST00000492571 NUPR2A6NF83 97 aa7.4□□□□□ -1.22
TNFRSF9-203ENST00000492571 FAM90A7PA6NKC0 464 aa7.4□□□□□ -1.22
TNFRSF9-203ENST00000492571 FAM90A23PA8MXZ1 464 aa7.4□□□□□ -1.22
TNFRSF9-203ENST00000492571 OR11H12B2RN74 326 aa7.4□□□□□ -1.22
TNFRSF9-203ENST00000492571 GPX5O75715 221 aa7.4□□□□□ -1.22
TNFRSF9-203ENST00000492571 OR2A4O95047 310 aa7.4□□□□□ -1.22
TNFRSF9-203ENST00000492571 CA2P00918 260 aa7.4□□□□□ -1.22
TNFRSF9-203ENST00000492571 EGR2P11161 476 aaPredicted RBP7.4□□□□□ -1.22
TNFRSF9-203ENST00000492571 CPEP16870 476 aa7.4□□□□□ -1.22
TNFRSF9-203ENST00000492571 RPS16P62249 146 aaKnown RBP7.4□□□□□ -1.22
TNFRSF9-203ENST00000492571 GNMTQ14749 295 aa7.4□□□□□ -1.22
TNFRSF9-203ENST00000492571 FXYD3Q14802 87 aa7.4□□□□□ -1.22
TNFRSF9-203ENST00000492571 RPL22L1Q6P5R6 122 aaKnown RBP7.4□□□□□ -1.22
TNFRSF9-203ENST00000492571 AMIGO2Q86SJ2 522 aa7.4□□□□□ -1.22
TNFRSF9-203ENST00000492571 ODF3L1Q8IXM7 274 aa7.4□□□□□ -1.22
TNFRSF9-203ENST00000492571 GAPTQ8N292 157 aa7.4□□□□□ -1.22
TNFRSF9-203ENST00000492571 OR5T1Q8NG75 326 aa7.4□□□□□ -1.22
TNFRSF9-203ENST00000492571 DYNLRB2Q8TF09 96 aa7.4□□□□□ -1.22
TNFRSF9-203ENST00000492571 IL1F10Q8WWZ1 152 aa7.4□□□□□ -1.22
TNFRSF9-203ENST00000492571 LGALS12Q96DT0 336 aa7.4□□□□□ -1.22
TNFRSF9-203ENST00000492571 USMG5Q96IX5 58 aa7.4□□□□□ -1.22
TNFRSF9-203ENST00000492571 ZNF184Q99676 751 aaPredicted RBP7.4□□□□□ -1.22
TNFRSF9-203ENST00000492571 SELENOIQ9C0D9 397 aa7.4□□□□□ -1.22
TNFRSF9-203ENST00000492571 KLK5Q9Y337 293 aaPredicted RBP7.4□□□□□ -1.22
TNFRSF9-203ENST00000492571 A0A1W2PP11 408 aa7.39□□□□□ -1.23
TNFRSF9-203ENST00000492571 E9PI62 339 aa7.39□□□□□ -1.23
TNFRSF9-203ENST00000492571 CRTAPO75718 401 aaPredicted RBP7.39□□□□□ -1.23
TNFRSF9-203ENST00000492571 BRI3O95415 125 aa7.39□□□□□ -1.23
TNFRSF9-203ENST00000492571 CSN3P07498 182 aa7.39□□□□□ -1.23
TNFRSF9-203ENST00000492571 PSG5Q15238 335 aa7.39□□□□□ -1.23
TNFRSF9-203ENST00000492571 GUCA2BQ16661 112 aa7.39□□□□□ -1.23
TNFRSF9-203ENST00000492571 CCDC58Q4VC31 144 aa7.39□□□□□ -1.23
TNFRSF9-203ENST00000492571 AWAT2Q6E213 333 aa7.39□□□□□ -1.23
TNFRSF9-203ENST00000492571 GLIPR1L1Q6UWM5 242 aa7.39□□□□□ -1.23
TNFRSF9-203ENST00000492571 IL34Q6ZMJ4 242 aa7.39□□□□□ -1.23
TNFRSF9-203ENST00000492571 LINC00322Q6ZN03 302 aaPredicted RBP7.39□□□□□ -1.23
TNFRSF9-203ENST00000492571 SLC16A13Q7RTY0 426 aa7.39□□□□□ -1.23
TNFRSF9-203ENST00000492571 JAGN1Q8N5M9 183 aa7.39□□□□□ -1.23
TNFRSF9-203ENST00000492571 DEFB125Q8N687 156 aa7.39□□□□□ -1.23
TNFRSF9-203ENST00000492571 SRD5A3Q9H8P0 318 aa7.39□□□□□ -1.23
TNFRSF9-203ENST00000492571 ERVK13-1Q9NX77 482 aa7.39□□□□□ -1.23
TNFRSF9-203ENST00000492571 SLC23A1Q9UHI7 598 aa7.39□□□□□ -1.23
TNFRSF9-203ENST00000492571 OAZ3Q9UMX2 235 aa7.39□□□□□ -1.23
TNFRSF9-203ENST00000492571 H0YJW9 148 aa7.38□□□□□ -1.23
TNFRSF9-203ENST00000492571 SC5DO75845 299 aa7.38□□□□□ -1.23
TNFRSF9-203ENST00000492571 NDUFB8O95169 186 aa7.38□□□□□ -1.23
TNFRSF9-203ENST00000492571 SPDEFO95238 335 aa7.38□□□□□ -1.23
TNFRSF9-203ENST00000492571 APOA2P02652 100 aa7.38□□□□□ -1.23
TNFRSF9-203ENST00000492571 CT45A6P0DMU7 189 aa7.38□□□□□ -1.23
TNFRSF9-203ENST00000492571 CT45A5P0DMU8 189 aa7.38□□□□□ -1.23
TNFRSF9-203ENST00000492571 CT45A7P0DMV0 189 aa7.38□□□□□ -1.23
TNFRSF9-203ENST00000492571 CAPGP40121 348 aa7.38□□□□□ -1.23
TNFRSF9-203ENST00000492571 PMS2P11Q13670 270 aa7.38□□□□□ -1.23
TNFRSF9-203ENST00000492571 GLDNQ6ZMI3 551 aaPredicted RBP7.38□□□□□ -1.23
TNFRSF9-203ENST00000492571 TMPRSS11AQ6ZMR5 421 aa7.38□□□□□ -1.23
TNFRSF9-203ENST00000492571 BVESQ8NE79 360 aa7.38□□□□□ -1.23
TNFRSF9-203ENST00000492571 OR5AN1Q8NGI8 311 aa7.38□□□□□ -1.23
TNFRSF9-203ENST00000492571 THRSPQ92748 146 aa7.38□□□□□ -1.23
TNFRSF9-203ENST00000492571 MUL1Q969V5 352 aa7.38□□□□□ -1.23
TNFRSF9-203ENST00000492571 CENPNQ96H22 339 aaPredicted RBP7.38□□□□□ -1.23
TNFRSF9-203ENST00000492571 NEDD4LQ96PU5 975 aa7.38□□□□□ -1.23
TNFRSF9-203ENST00000492571 PHB2Q99623 299 aa7.38□□□□□ -1.23
TNFRSF9-203ENST00000492571 THAP7Q9BT49 309 aaPredicted RBP7.38□□□□□ -1.23
TNFRSF9-203ENST00000492571 CHMP1AQ9HD42 196 aaPredicted RBP7.38□□□□□ -1.23
TNFRSF9-203ENST00000492571 COA4Q9NYJ1 87 aa7.38□□□□□ -1.23
TNFRSF9-203ENST00000492571 GAB2Q9UQC2 676 aa7.38□□□□□ -1.23
TNFRSF9-203ENST00000492571 RPL36Q9Y3U8 105 aaKnown RBP7.38□□□□□ -1.23
TNFRSF9-203ENST00000492571 PLECQ15149 4684 aaKnown RBP7.37□□□□□ -1.23
TNFRSF9-203ENST00000492571 IZUMO1RA6ND01 250 aa7.37□□□□□ -1.23
TNFRSF9-203ENST00000492571 PDCD6O75340 191 aa7.37□□□□□ -1.23
TNFRSF9-203ENST00000492571 BAG2O95816 211 aa7.37□□□□□ -1.23
TNFRSF9-203ENST00000492571 MGMTP16455 207 aa7.37□□□□□ -1.23
TNFRSF9-203ENST00000492571 MAP2K4P45985 399 aa7.37□□□□□ -1.23
TNFRSF9-203ENST00000492571 GTF2A1P52655 376 aaPredicted RBP7.37□□□□□ -1.23
TNFRSF9-203ENST00000492571 CBX3Q13185 183 aa7.37□□□□□ -1.23
TNFRSF9-203ENST00000492571 CD300EQ496F6 205 aaPredicted RBP7.37□□□□□ -1.23
TNFRSF9-203ENST00000492571 RPL39P5Q59GN2 51 aa7.37□□□□□ -1.23
TNFRSF9-203ENST00000492571 DMKNQ6E0U4 476 aaPredicted RBP7.37□□□□□ -1.23
TNFRSF9-203ENST00000492571 ZNF343Q6P1L6 599 aa7.37□□□□□ -1.23
TNFRSF9-203ENST00000492571 CDH26Q8IXH8 852 aa7.37□□□□□ -1.23
TNFRSF9-203ENST00000492571 TINAGL1Q9GZM7 467 aaPredicted RBP7.37□□□□□ -1.23
TNFRSF9-203ENST00000492571 IFI27L2Q9H2X8 130 aa7.37□□□□□ -1.23
TNFRSF9-203ENST00000492571 BANF2Q9H503 90 aa7.37□□□□□ -1.23
TNFRSF9-203ENST00000492571 GHRLQ9UBU3 117 aa7.37□□□□□ -1.23
TNFRSF9-203ENST00000492571 ZNF221Q9UK13 617 aa7.37□□□□□ -1.23
TNFRSF9-203ENST00000492571 TNCP24821 2201 aa7.36□□□□□ -1.23
TNFRSF9-203ENST00000492571 SAC3D1A6NKF1 404 aa7.36□□□□□ -1.23
TNFRSF9-203ENST00000492571 NPIPB6E9PJ23 425 aa7.36□□□□□ -1.23
TNFRSF9-203ENST00000492571 MPPED1O15442 326 aa7.36□□□□□ -1.23
TNFRSF9-203ENST00000492571 TUSC2O75896 110 aa7.36□□□□□ -1.23
TNFRSF9-203ENST00000492571 CD7P09564 240 aa7.36□□□□□ -1.23
TNFRSF9-203ENST00000492571 ZBTB25P24278 435 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms