RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 TSNAXQ99598 290 aaKnown RBP13.01□□□□□ -0.33
PDLIM2-217ENST00000491330 PECRQ9BY49 303 aa13.01□□□□□ -0.33
PDLIM2-217ENST00000491330 Q9N2K0 584 aa13.01□□□□□ -0.33
PDLIM2-217ENST00000491330 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.01□□□□□ -0.33
PDLIM2-217ENST00000491330 VSIG4Q9Y279 399 aa13.01□□□□□ -0.33
PDLIM2-217ENST00000491330 PLXNB1O43157 2135 aa13□□□□□ -0.33
PDLIM2-217ENST00000491330 CLDN12P56749 244 aa13□□□□□ -0.33
PDLIM2-217ENST00000491330 TAGLNQ01995 201 aaKnown RBP13□□□□□ -0.33
PDLIM2-217ENST00000491330 PYHIN1Q6K0P9 492 aa13□□□□□ -0.33
PDLIM2-217ENST00000491330 FAM131AQ6UXB0 335 aa13□□□□□ -0.33
PDLIM2-217ENST00000491330 ODF3L1Q8IXM7 274 aa13□□□□□ -0.33
PDLIM2-217ENST00000491330 RNF152Q8N8N0 203 aa13□□□□□ -0.33
PDLIM2-217ENST00000491330 OR4A4PQ8NGN8 299 aa13□□□□□ -0.33
PDLIM2-217ENST00000491330 OR10R2Q8NGX6 335 aa13□□□□□ -0.33
PDLIM2-217ENST00000491330 OR10J5Q8NHC4 309 aa13□□□□□ -0.33
PDLIM2-217ENST00000491330 UBE2E2Q96LR5 201 aa13□□□□□ -0.33
PDLIM2-217ENST00000491330 HSPB9Q9BQS6 159 aa13□□□□□ -0.33
PDLIM2-217ENST00000491330 IFI27L2Q9H2X8 130 aa13□□□□□ -0.33
PDLIM2-217ENST00000491330 WSB1Q9Y6I7 421 aa13□□□□□ -0.33
PDLIM2-217ENST00000491330 SHISA3A0PJX4 238 aa12.99□□□□□ -0.33
PDLIM2-217ENST00000491330 RRHO14718 337 aa12.99□□□□□ -0.33
PDLIM2-217ENST00000491330 OR8U8P0C7N1 319 aa12.99□□□□□ -0.33
PDLIM2-217ENST00000491330 HOXD3P31249 432 aaPredicted RBP12.99□□□□□ -0.33
PDLIM2-217ENST00000491330 RPS16P62249 146 aaKnown RBP12.99□□□□□ -0.33
PDLIM2-217ENST00000491330 PITPNAQ00169 270 aa12.99□□□□□ -0.33
PDLIM2-217ENST00000491330 ARFRP1Q13795 201 aa12.99□□□□□ -0.33
PDLIM2-217ENST00000491330 Q6ZS49 121 aa12.99□□□□□ -0.33
PDLIM2-217ENST00000491330 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.99□□□□□ -0.33
PDLIM2-217ENST00000491330 RAX2Q96IS3 184 aa12.99□□□□□ -0.33
PDLIM2-217ENST00000491330 TOLLIPQ9H0E2 274 aa12.99□□□□□ -0.33
PDLIM2-217ENST00000491330 C11orf54Q9H0W9 315 aaPredicted RBP12.99□□□□□ -0.33
PDLIM2-217ENST00000491330 KCNK15Q9H427 330 aa12.99□□□□□ -0.33
PDLIM2-217ENST00000491330 ETV7Q9Y603 341 aa12.99□□□□□ -0.33
PDLIM2-217ENST00000491330 NOTCH3Q9UM47 2321 aa12.98□□□□□ -0.33
PDLIM2-217ENST00000491330 A0A0A6YYH2 397 aa12.98□□□□□ -0.33
PDLIM2-217ENST00000491330 A6NJ64 397 aa12.98□□□□□ -0.33
PDLIM2-217ENST00000491330 RAB27BO00194 218 aa12.98□□□□□ -0.33
PDLIM2-217ENST00000491330 ATP6V0E1O15342 81 aa12.98□□□□□ -0.33
PDLIM2-217ENST00000491330 TFAP2AP05549 437 aa12.98□□□□□ -0.33
PDLIM2-217ENST00000491330 HIST1H1DP16402 221 aaKnown RBP12.98□□□□□ -0.33
PDLIM2-217ENST00000491330 CD36P16671 472 aa12.98□□□□□ -0.33
PDLIM2-217ENST00000491330 PSMB8P28062 276 aa12.98□□□□□ -0.33
PDLIM2-217ENST00000491330 INSL3P51460 131 aa12.98□□□□□ -0.33
PDLIM2-217ENST00000491330 OR10A3P58181 314 aa12.98□□□□□ -0.33
PDLIM2-217ENST00000491330 EGFEM1PQ0D2K5 195 aa12.98□□□□□ -0.33
PDLIM2-217ENST00000491330 RPL39P5Q59GN2 51 aa12.98□□□□□ -0.33
PDLIM2-217ENST00000491330 SFXN4Q6P4A7 337 aa12.98□□□□□ -0.33
PDLIM2-217ENST00000491330 ETV3LQ6ZN32 361 aa12.98□□□□□ -0.33
PDLIM2-217ENST00000491330 TSPAN14Q8NG11 270 aa12.98□□□□□ -0.33
PDLIM2-217ENST00000491330 FLYWCH2Q96CP2 140 aaKnown RBP12.98□□□□□ -0.33
PDLIM2-217ENST00000491330 ABHD14BQ96IU4 210 aa12.98□□□□□ -0.33
PDLIM2-217ENST00000491330 GINS4Q9BRT9 223 aa12.98□□□□□ -0.33
PDLIM2-217ENST00000491330 MFNGO00587 321 aa12.97□□□□□ -0.33
PDLIM2-217ENST00000491330 BET1O15155 118 aa12.97□□□□□ -0.33
PDLIM2-217ENST00000491330 FABP7O15540 132 aa12.97□□□□□ -0.33
PDLIM2-217ENST00000491330 NDUFA3O95167 84 aa12.97□□□□□ -0.33
PDLIM2-217ENST00000491330 SPDEFO95238 335 aa12.97□□□□□ -0.33
PDLIM2-217ENST00000491330 SCTP09683 121 aa12.97□□□□□ -0.33
PDLIM2-217ENST00000491330 CT45A6P0DMU7 189 aa12.97□□□□□ -0.33
PDLIM2-217ENST00000491330 CT45A5P0DMU8 189 aa12.97□□□□□ -0.33
PDLIM2-217ENST00000491330 CT45A7P0DMV0 189 aa12.97□□□□□ -0.33
PDLIM2-217ENST00000491330 DTYMKP23919 212 aa12.97□□□□□ -0.33
PDLIM2-217ENST00000491330 CD69Q07108 199 aa12.97□□□□□ -0.33
PDLIM2-217ENST00000491330 NEDD8Q15843 81 aa12.97□□□□□ -0.33
PDLIM2-217ENST00000491330 ECSCRQ19T08 205 aa12.97□□□□□ -0.33
PDLIM2-217ENST00000491330 PLAC9Q5JTB6 97 aa12.97□□□□□ -0.33
PDLIM2-217ENST00000491330 PDPNQ86YL7 162 aa12.97□□□□□ -0.33
PDLIM2-217ENST00000491330 OR11H1Q8NG94 326 aa12.97□□□□□ -0.33
PDLIM2-217ENST00000491330 OR5AN1Q8NGI8 311 aa12.97□□□□□ -0.33
PDLIM2-217ENST00000491330 OR1N2Q8NGR9 330 aa12.97□□□□□ -0.33
PDLIM2-217ENST00000491330 HDHD3Q9BSH5 251 aaPredicted RBP12.97□□□□□ -0.33
PDLIM2-217ENST00000491330 FBXL15Q9H469 300 aa12.97□□□□□ -0.33
PDLIM2-217ENST00000491330 RDH8Q9NYR8 311 aa12.97□□□□□ -0.33
PDLIM2-217ENST00000491330 METTL1Q9UBP6 276 aaKnown RBP12.97□□□□□ -0.33
PDLIM2-217ENST00000491330 FOXA2Q9Y261 457 aaPredicted RBP12.97□□□□□ -0.33
PDLIM2-217ENST00000491330 A0A075B6Q4 140 aa12.96□□□□□ -0.33
PDLIM2-217ENST00000491330 IGHV7-81A0A0B4J1V7 117 aa12.96□□□□□ -0.33
PDLIM2-217ENST00000491330 A0A1W2PN81 502 aa12.96□□□□□ -0.33
PDLIM2-217ENST00000491330 SEC14L6B5MCN3 397 aa12.96□□□□□ -0.33
PDLIM2-217ENST00000491330 H0YJW9 148 aa12.96□□□□□ -0.33
PDLIM2-217ENST00000491330 ARPC1BO15143 372 aaKnown RBP12.96□□□□□ -0.33
PDLIM2-217ENST00000491330 RRASP10301 218 aa12.96□□□□□ -0.33
PDLIM2-217ENST00000491330 CHRNA7P36544 502 aa12.96□□□□□ -0.33
PDLIM2-217ENST00000491330 LGALS7P47929 136 aa12.96□□□□□ -0.33
PDLIM2-217ENST00000491330 RAB9AP51151 201 aa12.96□□□□□ -0.33
PDLIM2-217ENST00000491330 ZNF616Q08AN1 781 aa12.96□□□□□ -0.33
PDLIM2-217ENST00000491330 ZNF562Q6V9R5 426 aa12.96□□□□□ -0.33
PDLIM2-217ENST00000491330 C18orf65Q6ZTR6 163 aa12.96□□□□□ -0.33
PDLIM2-217ENST00000491330 DUX3Q96PT4 197 aa12.96□□□□□ -0.33
PDLIM2-217ENST00000491330 AGMATQ9BSE5 352 aa12.96□□□□□ -0.33
PDLIM2-217ENST00000491330 ATG5Q9H1Y0 275 aa12.96□□□□□ -0.33
PDLIM2-217ENST00000491330 OR51E2Q9H255 320 aa12.96□□□□□ -0.33
PDLIM2-217ENST00000491330 DCSTAMPQ9H295 470 aa12.96□□□□□ -0.33
PDLIM2-217ENST00000491330 OR1A1Q9P1Q5 309 aa12.96□□□□□ -0.33
PDLIM2-217ENST00000491330 M0R1X1 148 aa12.95□□□□□ -0.34
PDLIM2-217ENST00000491330 CNIH1O95406 144 aa12.95□□□□□ -0.34
PDLIM2-217ENST00000491330 FCGR3AP08637 254 aa12.95□□□□□ -0.34
PDLIM2-217ENST00000491330 CTXN2P0C2S0 81 aa12.95□□□□□ -0.34
PDLIM2-217ENST00000491330 SDC2P34741 201 aa12.95□□□□□ -0.34
PDLIM2-217ENST00000491330 CX3CL1P78423 397 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms