RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 BET1O15155 118 aa13.7□□□□□ -0.22
SEC13-218ENST00000490283 IGHG4P01861 327 aa13.7□□□□□ -0.22
SEC13-218ENST00000490283 APOA2P02652 100 aa13.7□□□□□ -0.22
SEC13-218ENST00000490283 FCGR3AP08637 254 aa13.7□□□□□ -0.22
SEC13-218ENST00000490283 CNTFRP26992 372 aa13.7□□□□□ -0.22
SEC13-218ENST00000490283 MOGAT2Q3SYC2 334 aa13.7□□□□□ -0.22
SEC13-218ENST00000490283 GLDNQ6ZMI3 551 aaPredicted RBP13.7□□□□□ -0.22
SEC13-218ENST00000490283 OR8U1Q8NH10 309 aa13.7□□□□□ -0.22
SEC13-218ENST00000490283 OR10J5Q8NHC4 309 aa13.7□□□□□ -0.22
SEC13-218ENST00000490283 RNF150Q9ULK6 438 aa13.7□□□□□ -0.22
SEC13-218ENST00000490283 A0A0B4J203 849 aa13.69□□□□□ -0.22
SEC13-218ENST00000490283 SMIM30A4D0T7 59 aa13.69□□□□□ -0.22
SEC13-218ENST00000490283 RAB27BO00194 218 aa13.69□□□□□ -0.22
SEC13-218ENST00000490283 MFNGO00587 321 aa13.69□□□□□ -0.22
SEC13-218ENST00000490283 SCGNO76038 276 aa13.69□□□□□ -0.22
SEC13-218ENST00000490283 NDUFA3O95167 84 aa13.69□□□□□ -0.22
SEC13-218ENST00000490283 DIRAS3O95661 229 aa13.69□□□□□ -0.22
SEC13-218ENST00000490283 CDX1P47902 265 aaPredicted RBP13.69□□□□□ -0.22
SEC13-218ENST00000490283 RAB25P57735 213 aa13.69□□□□□ -0.22
SEC13-218ENST00000490283 ETV3LQ6ZN32 361 aa13.69□□□□□ -0.22
SEC13-218ENST00000490283 C18orf65Q6ZTR6 163 aa13.69□□□□□ -0.22
SEC13-218ENST00000490283 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.69□□□□□ -0.22
SEC13-218ENST00000490283 OR5AN1Q8NGI8 311 aa13.69□□□□□ -0.22
SEC13-218ENST00000490283 RITA1Q96K30 269 aa13.69□□□□□ -0.22
SEC13-218ENST00000490283 RNF5Q99942 180 aa13.69□□□□□ -0.22
SEC13-218ENST00000490283 GINS4Q9BRT9 223 aa13.69□□□□□ -0.22
SEC13-218ENST00000490283 AURKAIP1Q9NWT8 199 aaPredicted RBP13.69□□□□□ -0.22
SEC13-218ENST00000490283 KCNK7Q9Y2U2 307 aa13.69□□□□□ -0.22
SEC13-218ENST00000490283 RBM7Q9Y580 266 aaKnown RBP13.69□□□□□ -0.22
SEC13-218ENST00000490283 TRAV41A0A0B4J266 112 aa13.68□□□□□ -0.22
SEC13-218ENST00000490283 IGKV1-6A0A0C4DH72 117 aa13.68□□□□□ -0.22
SEC13-218ENST00000490283 CCL24O00175 119 aa13.68□□□□□ -0.22
SEC13-218ENST00000490283 RRHO14718 337 aa13.68□□□□□ -0.22
SEC13-218ENST00000490283 ATP6V0E1O15342 81 aa13.68□□□□□ -0.22
SEC13-218ENST00000490283 TFAP2AP05549 437 aa13.68□□□□□ -0.22
SEC13-218ENST00000490283 CFHR3Q02985 330 aa13.68□□□□□ -0.22
SEC13-218ENST00000490283 CBX3Q13185 183 aa13.68□□□□□ -0.22
SEC13-218ENST00000490283 RNF152Q8N8N0 203 aa13.68□□□□□ -0.22
SEC13-218ENST00000490283 ABHD5Q8WTS1 349 aa13.68□□□□□ -0.22
SEC13-218ENST00000490283 TSNAXQ99598 290 aaKnown RBP13.68□□□□□ -0.22
SEC13-218ENST00000490283 CABLES2Q9BTV7 478 aa13.68□□□□□ -0.22
SEC13-218ENST00000490283 FBXL15Q9H469 300 aa13.68□□□□□ -0.22
SEC13-218ENST00000490283 DAPK2Q9UIK4 370 aa13.68□□□□□ -0.22
SEC13-218ENST00000490283 WSB1Q9Y6I7 421 aa13.68□□□□□ -0.22
SEC13-218ENST00000490283 IGHV7-81A0A0B4J1V7 117 aa13.67□□□□□ -0.22
SEC13-218ENST00000490283 M0R1X1 148 aa13.67□□□□□ -0.22
SEC13-218ENST00000490283 GSTT2P0CG29 244 aa13.67□□□□□ -0.22
SEC13-218ENST00000490283 GSTT2BP0CG30 244 aa13.67□□□□□ -0.22
SEC13-218ENST00000490283 PSMB8P28062 276 aa13.67□□□□□ -0.22
SEC13-218ENST00000490283 NEDD8Q15843 81 aa13.67□□□□□ -0.22
SEC13-218ENST00000490283 IGSF11Q5DX21 431 aa13.67□□□□□ -0.22
SEC13-218ENST00000490283 ZNF660Q6AZW8 331 aaPredicted RBP13.67□□□□□ -0.22
SEC13-218ENST00000490283 LCNL1Q6ZST4 164 aa13.67□□□□□ -0.22
SEC13-218ENST00000490283 NR2C2APQ86WQ0 139 aa13.67□□□□□ -0.22
SEC13-218ENST00000490283 PDPNQ86YL7 162 aa13.67□□□□□ -0.22
SEC13-218ENST00000490283 DRAXINQ8NBI3 349 aaPredicted RBP13.67□□□□□ -0.22
SEC13-218ENST00000490283 C4orf3Q8WVX3 66 aa13.67□□□□□ -0.22
SEC13-218ENST00000490283 P2RX4Q99571 388 aa13.67□□□□□ -0.22
SEC13-218ENST00000490283 OR2D2Q9H210 308 aa13.67□□□□□ -0.22
SEC13-218ENST00000490283 ZMAT5Q9UDW3 170 aaKnown RBP13.67□□□□□ -0.22
SEC13-218ENST00000490283 RRP15Q9Y3B9 282 aaKnown RBP13.67□□□□□ -0.22
SEC13-218ENST00000490283 TRBV6-7A0A0A0MS04 114 aa13.66□□□□□ -0.22
SEC13-218ENST00000490283 LOC100506127A0A0U1RQW1 187 aa13.66□□□□□ -0.22
SEC13-218ENST00000490283 OR8U9P0C7N5 309 aa13.66□□□□□ -0.22
SEC13-218ENST00000490283 DTYMKP23919 212 aa13.66□□□□□ -0.22
SEC13-218ENST00000490283 RPS16P62249 146 aaKnown RBP13.66□□□□□ -0.22
SEC13-218ENST00000490283 TMEM267Q0VDI3 215 aaPredicted RBP13.66□□□□□ -0.22
SEC13-218ENST00000490283 SRSF7Q16629 238 aaKnown RBP eCLIP13.66□□□□□ -0.22
SEC13-218ENST00000490283 ECSCRQ19T08 205 aa13.66□□□□□ -0.22
SEC13-218ENST00000490283 KCTD21Q4G0X4 260 aa13.66□□□□□ -0.22
SEC13-218ENST00000490283 SFXN4Q6P4A7 337 aa13.66□□□□□ -0.22
SEC13-218ENST00000490283 MAFIPQ8WZ33 124 aa13.66□□□□□ -0.22
SEC13-218ENST00000490283 RAX2Q96IS3 184 aa13.66□□□□□ -0.22
SEC13-218ENST00000490283 DUX3Q96PT4 197 aa13.66□□□□□ -0.22
SEC13-218ENST00000490283 TOLLIPQ9H0E2 274 aa13.66□□□□□ -0.22
SEC13-218ENST00000490283 OR51E2Q9H255 320 aa13.66□□□□□ -0.22
SEC13-218ENST00000490283 ZNF230Q9UIE0 474 aaPredicted RBP13.66□□□□□ -0.22
SEC13-218ENST00000490283 G3V318 75 aa13.65□□□□□ -0.22
SEC13-218ENST00000490283 SPDEFO95238 335 aa13.65□□□□□ -0.22
SEC13-218ENST00000490283 PITPNAQ00169 270 aa13.65□□□□□ -0.22
SEC13-218ENST00000490283 CDNFQ49AH0 187 aa13.65□□□□□ -0.22
SEC13-218ENST00000490283 TCTEX1D1Q8N7M0 179 aa13.65□□□□□ -0.22
SEC13-218ENST00000490283 OR5M8Q8NGP6 311 aa13.65□□□□□ -0.22
SEC13-218ENST00000490283 FLYWCH2Q96CP2 140 aaKnown RBP13.65□□□□□ -0.22
SEC13-218ENST00000490283 VCX3AQ9NNX9 186 aa13.65□□□□□ -0.22
SEC13-218ENST00000490283 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.65□□□□□ -0.22
SEC13-218ENST00000490283 SLC35D1Q9NTN3 355 aa13.65□□□□□ -0.22
SEC13-218ENST00000490283 METTL1Q9UBP6 276 aaKnown RBP13.65□□□□□ -0.22
SEC13-218ENST00000490283 SNRPBP14678 240 aaKnown RBP13.64□□□□□ -0.23
SEC13-218ENST00000490283 CD36P16671 472 aa13.64□□□□□ -0.23
SEC13-218ENST00000490283 CD40LGP29965 261 aa13.64□□□□□ -0.23
SEC13-218ENST00000490283 PPIFP30405 207 aaKnown RBP13.64□□□□□ -0.23
SEC13-218ENST00000490283 SDC2P34741 201 aa13.64□□□□□ -0.23
SEC13-218ENST00000490283 GNG2P59768 71 aa13.64□□□□□ -0.23
SEC13-218ENST00000490283 CX3CL1P78423 397 aa13.64□□□□□ -0.23
SEC13-218ENST00000490283 TAGLNQ01995 201 aaKnown RBP13.64□□□□□ -0.23
SEC13-218ENST00000490283 MXD1Q05195 221 aa13.64□□□□□ -0.23
SEC13-218ENST00000490283 PSG5Q15238 335 aa13.64□□□□□ -0.23
SEC13-218ENST00000490283 DEFB136Q30KP8 78 aa13.64□□□□□ -0.23
SEC13-218ENST00000490283 TIMM50Q3ZCQ8 353 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms