RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 SLC25A31Q9H0C2 315 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 PLEKHF2Q9H8W4 249 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 ZDHHC11Q9H8X9 412 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 PLEKHA3Q9HB20 300 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 MARCH5Q9NX47 278 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 TVP23BQ9NYZ1 205 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 TNFSF18Q9UNG2 199 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 NEU3Q9UQ49 428 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 FLVCR1Q9Y5Y0 555 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 URGCP-MRPS24S4R325 110 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 GON4LQ3T8J9 2241 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 A0A0B4J2A0 478 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 TVP23AA6NH52 213 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 OR5H14A6NHG9 310 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 FAM183AA6NL82 134 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 RPL36A-HNRNPH2H7BZ11 118 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 RAMP2O60895 175 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 SOX14O95416 240 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 IL3P08700 152 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 MMP7P09237 267 aaPredicted RBP2.2□□□□□ -2.06
UBXN4-208ENST00000490163 CD79AP11912 226 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 AQP1P29972 269 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 BRS3P32247 399 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 H2BFSP57053 126 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 UBE2MP61081 183 aaKnown RBP2.2□□□□□ -2.06
UBXN4-208ENST00000490163 H3F3AP84243 136 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 GGTLC2Q14390 218 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 ARHGAP11BQ3KRB8 267 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 HENMT1Q5T8I9 393 aaKnown RBP2.2□□□□□ -2.06
UBXN4-208ENST00000490163 CD200R1LQ6Q8B3 271 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 ALKAL1Q6UXT8 129 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 ZNF621Q6ZSS3 439 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 MFSD8Q8NHS3 518 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 C15orf40Q8WUR7 153 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 ORAOV1Q8WV07 137 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 SECTM1Q8WVN6 248 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 VOPP1Q96AW1 172 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 TIMD4Q96H15 378 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 SMIM8Q96KF7 97 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 BMFQ96LC9 184 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 IP6K3Q96PC2 410 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 LYSMD1Q96S90 227 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 DOHHQ9BU89 302 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 PBDC1Q9BVG4 233 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 TMEM59Q9BXS4 323 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 EIF5A2Q9GZV4 153 aaKnown RBP2.2□□□□□ -2.06
UBXN4-208ENST00000490163 POLR2J3Q9H1A7 115 aaKnown RBP2.2□□□□□ -2.06
UBXN4-208ENST00000490163 RDH14Q9HBH5 336 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 SLC2A9Q9NRM0 540 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 ABRACLQ9P1F3 81 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 SHPKQ9UHJ6 478 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 TP53TG1Q9Y2A0 90 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 NOP16Q9Y3C1 178 aaKnown RBP2.2□□□□□ -2.06
UBXN4-208ENST00000490163 C2orf16Q68DN1 1984 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 PLXND1Q9Y4D7 1925 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 TSPAN11A1L157 253 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 GABARAPH6UMI1 98 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 GCM2O75603 506 aaPredicted RBP2.2□□□□□ -2.06
UBXN4-208ENST00000490163 CPSF4O95639 269 aaKnown RBP2.2□□□□□ -2.06
UBXN4-208ENST00000490163 AIFM1O95831 613 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 ADRA2AP08913 450 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 IGHV3-43DP0DP04 118 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 SLC25A4P12235 298 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 PPIBP23284 216 aaKnown RBP2.2□□□□□ -2.06
UBXN4-208ENST00000490163 CD34P28906 385 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 MYCNOSP40205 109 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 POLR2HP52434 150 aaKnown RBP2.2□□□□□ -2.06
UBXN4-208ENST00000490163 TAS2R19P59542 299 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 CDK5Q00535 292 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 OR7A5Q15622 319 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 SMIM21Q3B7S5 101 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 SOHLH1Q5JUK2 328 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 LDLRAD2Q5SZI1 272 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 C1orf194Q5T5A4 169 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 AWAT2Q6E213 333 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 DNM1P34Q6PK57 102 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 ARL9Q6T311 187 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 FAM151BQ6UXP7 276 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 MSRB3Q8IXL7 192 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 ZADH2Q8N4Q0 377 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 SUMF2Q8NBJ7 301 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 OR4S1Q8NGB4 309 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 OR13C4Q8NGS5 318 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 OR51Q1Q8NH59 317 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 OR51A7Q8NH64 312 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 SLC7A13Q8TCU3 470 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 RNASEH2CQ8TDP1 164 aaKnown RBP2.2□□□□□ -2.06
UBXN4-208ENST00000490163 GEMIN6Q8WXD5 167 aaKnown RBP2.2□□□□□ -2.06
UBXN4-208ENST00000490163 ASB17Q8WXJ9 295 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 TMEM234Q8WY98 164 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 TMEM159Q96B96 161 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 RPUSD4Q96CM3 377 aaKnown RBP2.2□□□□□ -2.06
UBXN4-208ENST00000490163 LYZL4Q96KX0 146 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 TBL1YQ9BQ87 522 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 PRO3102Q9H379 93 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 LRTM1Q9HBL6 345 aa2.2□□□□□ -2.06
UBXN4-208ENST00000490163 TNRC6BQ9UPQ9 1833 aaKnown RBP2.2□□□□□ -2.06
UBXN4-208ENST00000490163 CHD3Q12873 2000 aaKnown RBP2.2□□□□□ -2.06
UBXN4-208ENST00000490163 LOC102724200A0A096LPH7 203 aaPredicted RBP2.19□□□□□ -2.06
UBXN4-208ENST00000490163 IGHV7-81A0A0B4J1V7 117 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms