RNA–Protein interactions for RNA: ENST00000489430.1

MRPL55-230, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-230ENST00000489430 HSPB9Q9BQS6 159 aa14.94□□□□□ -0.02
MRPL55-230ENST00000489430 ATG5Q9H1Y0 275 aa14.94□□□□□ -0.02
MRPL55-230ENST00000489430 WASHC3Q9Y3C0 194 aa14.94□□□□□ -0.02
MRPL55-230ENST00000489430 A0A0B4J203 849 aa14.93□□□□□ -0.02
MRPL55-230ENST00000489430 GSTP1P09211 210 aaKnown RBP14.93□□□□□ -0.02
MRPL55-230ENST00000489430 SDC2P34741 201 aa14.93□□□□□ -0.02
MRPL55-230ENST00000489430 ARFRP1Q13795 201 aa14.93□□□□□ -0.02
MRPL55-230ENST00000489430 NEDD8Q15843 81 aa14.93□□□□□ -0.02
MRPL55-230ENST00000489430 CXorf66Q5JRM2 361 aaPredicted RBP14.93□□□□□ -0.02
MRPL55-230ENST00000489430 FAM131AQ6UXB0 335 aa14.93□□□□□ -0.02
MRPL55-230ENST00000489430 RITA1Q96K30 269 aa14.93□□□□□ -0.02
MRPL55-230ENST00000489430 DCSTAMPQ9H295 470 aa14.93□□□□□ -0.02
MRPL55-230ENST00000489430 VCX3AQ9NNX9 186 aa14.93□□□□□ -0.02
MRPL55-230ENST00000489430 DAPK2Q9UIK4 370 aa14.93□□□□□ -0.02
MRPL55-230ENST00000489430 ETV7Q9Y603 341 aa14.93□□□□□ -0.02
MRPL55-230ENST00000489430 PROP1O75360 226 aa14.92□□□□□ -0.02
MRPL55-230ENST00000489430 TNFAIP8O95379 198 aa14.92□□□□□ -0.02
MRPL55-230ENST00000489430 TFAP2AP05549 437 aa14.92□□□□□ -0.02
MRPL55-230ENST00000489430 MYCNOSP40205 109 aa14.92□□□□□ -0.02
MRPL55-230ENST00000489430 CDX1P47902 265 aaPredicted RBP14.92□□□□□ -0.02
MRPL55-230ENST00000489430 TAGLNQ01995 201 aaKnown RBP14.92□□□□□ -0.02
MRPL55-230ENST00000489430 OXLD1Q5BKU9 147 aa14.92□□□□□ -0.02
MRPL55-230ENST00000489430 HACD4Q5VWC8 232 aa14.92□□□□□ -0.02
MRPL55-230ENST00000489430 ZNF695Q8IW36 515 aa14.92□□□□□ -0.02
MRPL55-230ENST00000489430 GPR61Q9BZJ8 451 aa14.92□□□□□ -0.02
MRPL55-230ENST00000489430 OR51J1Q9H342 316 aa14.92□□□□□ -0.02
MRPL55-230ENST00000489430 NOTCH3Q9UM47 2321 aa14.92□□□□□ -0.02
MRPL55-230ENST00000489430 A0A075B6Q4 140 aa14.91□□□□□ -0.02
MRPL55-230ENST00000489430 A0A087WXM4 84 aa14.91□□□□□ -0.02
MRPL55-230ENST00000489430 A0A0A6YYH2 397 aa14.91□□□□□ -0.02
MRPL55-230ENST00000489430 IGHV7-81A0A0B4J1V7 117 aa14.91□□□□□ -0.02
MRPL55-230ENST00000489430 A6NJ64 397 aa14.91□□□□□ -0.02
MRPL55-230ENST00000489430 RRHO14718 337 aa14.91□□□□□ -0.02
MRPL55-230ENST00000489430 SPDEFO95238 335 aa14.91□□□□□ -0.02
MRPL55-230ENST00000489430 CTXN2P0C2S0 81 aa14.91□□□□□ -0.02
MRPL55-230ENST00000489430 GSTT2P0CG29 244 aa14.91□□□□□ -0.02
MRPL55-230ENST00000489430 GSTT2BP0CG30 244 aa14.91□□□□□ -0.02
MRPL55-230ENST00000489430 THBS3P49746 956 aa14.91□□□□□ -0.02
MRPL55-230ENST00000489430 CDNFQ49AH0 187 aa14.91□□□□□ -0.02
MRPL55-230ENST00000489430 IGSF11Q5DX21 431 aa14.91□□□□□ -0.02
MRPL55-230ENST00000489430 ZNF660Q6AZW8 331 aaPredicted RBP14.91□□□□□ -0.02
MRPL55-230ENST00000489430 PDPNQ86YL7 162 aa14.91□□□□□ -0.02
MRPL55-230ENST00000489430 NECAP2Q9NVZ3 263 aa14.91□□□□□ -0.02
MRPL55-230ENST00000489430 PLXNB1O43157 2135 aa14.9□□□□□ -0.02
MRPL55-230ENST00000489430 LOC100506127A0A0U1RQW1 187 aa14.9□□□□□ -0.02
MRPL55-230ENST00000489430 SMIM30A4D0T7 59 aa14.9□□□□□ -0.02
MRPL55-230ENST00000489430 NUDT19A8MXV4 375 aa14.9□□□□□ -0.02
MRPL55-230ENST00000489430 H7C2Y5 167 aa14.9□□□□□ -0.02
MRPL55-230ENST00000489430 BET1O15155 118 aa14.9□□□□□ -0.02
MRPL55-230ENST00000489430 APOA2P02652 100 aa14.9□□□□□ -0.02
MRPL55-230ENST00000489430 CNTFRP26992 372 aa14.9□□□□□ -0.02
MRPL55-230ENST00000489430 PSMB8P28062 276 aa14.9□□□□□ -0.02
MRPL55-230ENST00000489430 CROCCP3Q8IVE0 287 aa14.9□□□□□ -0.02
MRPL55-230ENST00000489430 TCTEX1D1Q8N7M0 179 aa14.9□□□□□ -0.02
MRPL55-230ENST00000489430 LINC00482Q8N8I6 264 aa14.9□□□□□ -0.02
MRPL55-230ENST00000489430 TSNAXQ99598 290 aaKnown RBP14.9□□□□□ -0.02
MRPL55-230ENST00000489430 RHBDL2Q9NX52 303 aa14.9□□□□□ -0.02
MRPL55-230ENST00000489430 ZNF230Q9UIE0 474 aaPredicted RBP14.9□□□□□ -0.02
MRPL55-230ENST00000489430 RNF150Q9ULK6 438 aa14.9□□□□□ -0.02
MRPL55-230ENST00000489430 SNRPBP14678 240 aaKnown RBP14.89□□□□□ -0.03
MRPL55-230ENST00000489430 PPIFP30405 207 aaKnown RBP14.89□□□□□ -0.03
MRPL55-230ENST00000489430 CRIP2P52943 208 aaPredicted RBP14.89□□□□□ -0.03
MRPL55-230ENST00000489430 GLDNQ6ZMI3 551 aaPredicted RBP14.89□□□□□ -0.03
MRPL55-230ENST00000489430 ETV3LQ6ZN32 361 aa14.89□□□□□ -0.03
MRPL55-230ENST00000489430 MRPL41Q8IXM3 137 aaKnown RBP14.89□□□□□ -0.03
MRPL55-230ENST00000489430 ZNF383Q8NA42 475 aa14.89□□□□□ -0.03
MRPL55-230ENST00000489430 KLHL30-AS1Q8NEE0 82 aa14.89□□□□□ -0.03
MRPL55-230ENST00000489430 TSPAN14Q8NG11 270 aa14.89□□□□□ -0.03
MRPL55-230ENST00000489430 LGALS14Q8TCE9 139 aa14.89□□□□□ -0.03
MRPL55-230ENST00000489430 P2RX4Q99571 388 aa14.89□□□□□ -0.03
MRPL55-230ENST00000489430 GINS4Q9BRT9 223 aa14.89□□□□□ -0.03
MRPL55-230ENST00000489430 MCRIP2Q9BUT9 160 aaKnown RBP14.89□□□□□ -0.03
MRPL55-230ENST00000489430 RPLP1P05386 114 aaKnown RBP14.88□□□□□ -0.03
MRPL55-230ENST00000489430 OR8U9P0C7N5 309 aa14.88□□□□□ -0.03
MRPL55-230ENST00000489430 MXD1Q05195 221 aa14.88□□□□□ -0.03
MRPL55-230ENST00000489430 ZNF260Q3ZCT1 412 aa14.88□□□□□ -0.03
MRPL55-230ENST00000489430 C8orf86Q6ZUL3 223 aa14.88□□□□□ -0.03
MRPL55-230ENST00000489430 OR8U1Q8NH10 309 aa14.88□□□□□ -0.03
MRPL55-230ENST00000489430 MYOZ3Q8TDC0 251 aa14.88□□□□□ -0.03
MRPL55-230ENST00000489430 FLYWCH2Q96CP2 140 aaKnown RBP14.88□□□□□ -0.03
MRPL55-230ENST00000489430 RBMXL1Q96E39 390 aaKnown RBP14.88□□□□□ -0.03
MRPL55-230ENST00000489430 OR2D2Q9H210 308 aa14.88□□□□□ -0.03
MRPL55-230ENST00000489430 TRAV41A0A0B4J266 112 aa14.87□□□□□ -0.03
MRPL55-230ENST00000489430 M0R1X1 148 aa14.87□□□□□ -0.03
MRPL55-230ENST00000489430 ATP6V0E1O15342 81 aa14.87□□□□□ -0.03
MRPL55-230ENST00000489430 IGLV1-40P01703 118 aa14.87□□□□□ -0.03
MRPL55-230ENST00000489430 IGKV1-16P04430 117 aa14.87□□□□□ -0.03
MRPL55-230ENST00000489430 IGLL1P15814 213 aa14.87□□□□□ -0.03
MRPL55-230ENST00000489430 LGALS7P47929 136 aa14.87□□□□□ -0.03
MRPL55-230ENST00000489430 CX3CL1P78423 397 aa14.87□□□□□ -0.03
MRPL55-230ENST00000489430 PLGLAQ15195 96 aa14.87□□□□□ -0.03
MRPL55-230ENST00000489430 ZNF562Q6V9R5 426 aa14.87□□□□□ -0.03
MRPL55-230ENST00000489430 H1FOOQ8IZA3 346 aaPredicted RBP14.87□□□□□ -0.03
MRPL55-230ENST00000489430 DRAXINQ8NBI3 349 aaPredicted RBP14.87□□□□□ -0.03
MRPL55-230ENST00000489430 MINDY2Q8NBR6 621 aa14.87□□□□□ -0.03
MRPL55-230ENST00000489430 ADTRPQ96IZ2 230 aa14.87□□□□□ -0.03
MRPL55-230ENST00000489430 PARP11Q9NR21 331 aa14.87□□□□□ -0.03
MRPL55-230ENST00000489430 SDHAF2Q9NX18 166 aa14.87□□□□□ -0.03
MRPL55-230ENST00000489430 PRKDCP78527 4128 aaKnown RBP14.86□□□□□ -0.03
MRPL55-230ENST00000489430 SLC22A5O76082 557 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms