RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 TNFRSF14Q92956 283 aa17.04■□□□□ 0.32
SND1-214ENST00000489417 CLEC7AQ9BXN2 247 aa17.04■□□□□ 0.32
SND1-214ENST00000489417 SPG11Q96JI7 2443 aa17.04■□□□□ 0.32
SND1-214ENST00000489417 PRTN3P24158 256 aa17.04■□□□□ 0.32
SND1-214ENST00000489417 COX7A1P24310 79 aa17.04■□□□□ 0.32
SND1-214ENST00000489417 DVL1P1P54792 670 aaPredicted RBP17.04■□□□□ 0.32
SND1-214ENST00000489417 RPL30P62888 115 aaKnown RBP17.04■□□□□ 0.32
SND1-214ENST00000489417 PRSS57Q6UWY2 283 aa17.04■□□□□ 0.32
SND1-214ENST00000489417 LRTM2Q8N967 370 aa17.04■□□□□ 0.32
SND1-214ENST00000489417 OR5M8Q8NGP6 311 aa17.04■□□□□ 0.32
SND1-214ENST00000489417 OR13D1Q8NGV5 346 aa17.04■□□□□ 0.32
SND1-214ENST00000489417 OR10X1Q8NGY0 326 aa17.04■□□□□ 0.32
SND1-214ENST00000489417 TCTEX1D2Q8WW35 142 aa17.04■□□□□ 0.32
SND1-214ENST00000489417 S1PR3Q99500 378 aa17.04■□□□□ 0.32
SND1-214ENST00000489417 ZNF251Q9BRH9 671 aa17.04■□□□□ 0.32
SND1-214ENST00000489417 ZNF436Q9C0F3 470 aaPredicted RBP17.04■□□□□ 0.32
SND1-214ENST00000489417 SIRPDQ9H106 197 aa17.04■□□□□ 0.32
SND1-214ENST00000489417 LPAR2Q9HBW0 351 aa17.04■□□□□ 0.32
SND1-214ENST00000489417 RANGRFQ9HD47 186 aaPredicted RBP17.04■□□□□ 0.32
SND1-214ENST00000489417 ARID1AO14497 2285 aa17.03■□□□□ 0.32
SND1-214ENST00000489417 A0A096LNT2 108 aa17.03■□□□□ 0.32
SND1-214ENST00000489417 CCSO14618 274 aa17.03■□□□□ 0.32
SND1-214ENST00000489417 SIX6O95475 246 aa17.03■□□□□ 0.32
SND1-214ENST00000489417 HLA-GP17693 338 aa17.03■□□□□ 0.32
SND1-214ENST00000489417 DUTP33316 252 aaKnown RBP17.03■□□□□ 0.32
SND1-214ENST00000489417 PRRX1P54821 245 aa17.03■□□□□ 0.32
SND1-214ENST00000489417 PRB3Q04118 309 aaPredicted RBP17.03■□□□□ 0.32
SND1-214ENST00000489417 C1orf229Q6ZS94 237 aaPredicted RBP17.03■□□□□ 0.32
SND1-214ENST00000489417 PNKDQ8N490 385 aa17.03■□□□□ 0.32
SND1-214ENST00000489417 TMEM56Q96MV1 263 aa17.03■□□□□ 0.32
SND1-214ENST00000489417 RAB18Q9NP72 206 aa17.03■□□□□ 0.32
SND1-214ENST00000489417 SIRT7Q9NRC8 400 aa17.03■□□□□ 0.32
SND1-214ENST00000489417 TMEM56-RWDD3S4R434 201 aa17.03■□□□□ 0.32
SND1-214ENST00000489417 TMEM268Q5VZI3 342 aa17.02■□□□□ 0.31
SND1-214ENST00000489417 VMO1Q7Z5L0 202 aa17.02■□□□□ 0.31
SND1-214ENST00000489417 TCTEX1D1Q8N7M0 179 aa17.02■□□□□ 0.31
SND1-214ENST00000489417 LHFPL5Q8TAF8 219 aa17.02■□□□□ 0.31
SND1-214ENST00000489417 FYTTD1Q96QD9 318 aaKnown RBP17.02■□□□□ 0.31
SND1-214ENST00000489417 HEXA-AS1Q9H8Q6 139 aa17.02■□□□□ 0.31
SND1-214ENST00000489417 UNKLQ9H9P5 680 aaKnown RBP17.02■□□□□ 0.31
SND1-214ENST00000489417 PTPN13Q12923 2485 aa17.02■□□□□ 0.31
SND1-214ENST00000489417 CENPEQ02224 2701 aa17.01■□□□□ 0.31
SND1-214ENST00000489417 LINC00473A8K010 186 aa17.01■□□□□ 0.31
SND1-214ENST00000489417 ADAP1O75689 374 aa17.01■□□□□ 0.31
SND1-214ENST00000489417 CDS2O95674 445 aa17.01■□□□□ 0.31
SND1-214ENST00000489417 IGLV1-47P01700 117 aa17.01■□□□□ 0.31
SND1-214ENST00000489417 SERPINE2P07093 398 aa17.01■□□□□ 0.31
SND1-214ENST00000489417 HOXB5P09067 269 aa17.01■□□□□ 0.31
SND1-214ENST00000489417 IL3RAP26951 378 aa17.01■□□□□ 0.31
SND1-214ENST00000489417 DCAF12L2Q5VW00 463 aa17.01■□□□□ 0.31
SND1-214ENST00000489417 ZNF833PQ6ZTB9 187 aa17.01■□□□□ 0.31
SND1-214ENST00000489417 ZNF695Q8IW36 515 aa17.01■□□□□ 0.31
SND1-214ENST00000489417 BEND2Q8NDZ0 799 aa17.01■□□□□ 0.31
SND1-214ENST00000489417 IL22RA2Q969J5 263 aa17.01■□□□□ 0.31
SND1-214ENST00000489417 PPP1R14BQ96C90 147 aa17.01■□□□□ 0.31
SND1-214ENST00000489417 C18orf12Q96KH6 178 aa17.01■□□□□ 0.31
SND1-214ENST00000489417 CHIAQ9BZP6 476 aa17.01■□□□□ 0.31
SND1-214ENST00000489417 INSIG2Q9Y5U4 225 aa17.01■□□□□ 0.31
SND1-214ENST00000489417 GIPP09681 153 aaPredicted RBP17■□□□□ 0.31
SND1-214ENST00000489417 THBS3P49746 956 aa17■□□□□ 0.31
SND1-214ENST00000489417 ZNF137PP52743 207 aa17■□□□□ 0.31
SND1-214ENST00000489417 H2BFSP57053 126 aa17■□□□□ 0.31
SND1-214ENST00000489417 LOXL1Q08397 574 aaPredicted RBP17■□□□□ 0.31
SND1-214ENST00000489417 HLA-DRB5Q30154 266 aa17■□□□□ 0.31
SND1-214ENST00000489417 OR2B11Q5JQS5 317 aa17■□□□□ 0.31
SND1-214ENST00000489417 NCR3LG1Q68D85 454 aa17■□□□□ 0.31
SND1-214ENST00000489417 FAM71F2Q6NXP2 309 aa17■□□□□ 0.31
SND1-214ENST00000489417 KRTAP1-3Q8IUG1 177 aa17■□□□□ 0.31
SND1-214ENST00000489417 SELENOHQ8IZQ5 122 aaKnown RBP17■□□□□ 0.31
SND1-214ENST00000489417 TCTE3Q8IZS6 198 aa17■□□□□ 0.31
SND1-214ENST00000489417 DRAXINQ8NBI3 349 aaPredicted RBP17■□□□□ 0.31
SND1-214ENST00000489417 TMEM186Q96B77 213 aa17■□□□□ 0.31
SND1-214ENST00000489417 C1orf159Q96HA4 380 aa17■□□□□ 0.31
SND1-214ENST00000489417 ADTRPQ96IZ2 230 aa17■□□□□ 0.31
SND1-214ENST00000489417 FAM212BQ9NTI7 297 aaPredicted RBP17■□□□□ 0.31
SND1-214ENST00000489417 FAM25EA8MYX2 175 aa16.99■□□□□ 0.31
SND1-214ENST00000489417 TOX4O94842 621 aa16.99■□□□□ 0.31
SND1-214ENST00000489417 OR2A4O95047 310 aa16.99■□□□□ 0.31
SND1-214ENST00000489417 IFNA21P01568 189 aa16.99■□□□□ 0.31
SND1-214ENST00000489417 MMP9P14780 707 aa16.99■□□□□ 0.31
SND1-214ENST00000489417 LINC00205P59089 165 aa16.99■□□□□ 0.31
SND1-214ENST00000489417 KLRD1Q13241 179 aa16.99■□□□□ 0.31
SND1-214ENST00000489417 ZNF585BQ52M93 769 aa16.99■□□□□ 0.31
SND1-214ENST00000489417 HCP5Q6MZN7 132 aa16.99■□□□□ 0.31
SND1-214ENST00000489417 GSG1LQ6UXU4 331 aa16.99■□□□□ 0.31
SND1-214ENST00000489417 LYZL2Q7Z4W2 148 aa16.99■□□□□ 0.31
SND1-214ENST00000489417 SPAG16Q8N0X2 631 aa16.99■□□□□ 0.31
SND1-214ENST00000489417 OR11H6Q8NGC7 330 aa16.99■□□□□ 0.31
SND1-214ENST00000489417 RBPMSQ93062 196 aaKnown RBP16.99■□□□□ 0.31
SND1-214ENST00000489417 OR2A7Q96R45 310 aa16.99■□□□□ 0.31
SND1-214ENST00000489417 PRELID3BQ9Y3B1 194 aa16.99■□□□□ 0.31
SND1-214ENST00000489417 AMMECR1Q9Y4X0 333 aaPredicted RBP16.99■□□□□ 0.31
SND1-214ENST00000489417 ANKRD17O75179 2603 aaKnown RBP16.98■□□□□ 0.31
SND1-214ENST00000489417 PIGBOS1A0A0B4J2F0 54 aa16.98■□□□□ 0.31
SND1-214ENST00000489417 DUXBA0A1W2PPF3 345 aa16.98■□□□□ 0.31
SND1-214ENST00000489417 C5orf51A6NDU8 294 aa16.98■□□□□ 0.31
SND1-214ENST00000489417 B4DSR2 109 aa16.98■□□□□ 0.31
SND1-214ENST00000489417 RNF223E7ERA6 249 aa16.98■□□□□ 0.31
SND1-214ENST00000489417 MSMBP08118 114 aa16.98■□□□□ 0.31
SND1-214ENST00000489417 LPAR6P43657 344 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms