RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 SULT1C4O75897 302 aa6.75□□□□□ -1.33
SSBP1-212ENST00000489378 HTR3BO95264 441 aa6.75□□□□□ -1.33
SSBP1-212ENST00000489378 FCGR2BP31994 310 aaPredicted RBP6.75□□□□□ -1.33
SSBP1-212ENST00000489378 MFAP2P55001 183 aa6.75□□□□□ -1.33
SSBP1-212ENST00000489378 SCAND1P57086 179 aa6.75□□□□□ -1.33
SSBP1-212ENST00000489378 PSG5Q15238 335 aa6.75□□□□□ -1.33
SSBP1-212ENST00000489378 TMEM30BQ3MIR4 351 aa6.75□□□□□ -1.33
SSBP1-212ENST00000489378 TP53I3Q53FA7 332 aa6.75□□□□□ -1.33
SSBP1-212ENST00000489378 SYT6Q5T7P8 510 aaPredicted RBP6.75□□□□□ -1.33
SSBP1-212ENST00000489378 AADACL4Q5VUY2 407 aa6.75□□□□□ -1.33
SSBP1-212ENST00000489378 TMEM244Q5VVB8 128 aa6.75□□□□□ -1.33
SSBP1-212ENST00000489378 HS3ST5Q8IZT8 346 aa6.75□□□□□ -1.33
SSBP1-212ENST00000489378 OR13C3Q8NGS6 347 aa6.75□□□□□ -1.33
SSBP1-212ENST00000489378 OR2G2Q8NGZ5 317 aa6.75□□□□□ -1.33
SSBP1-212ENST00000489378 OR4K15Q8NH41 348 aa6.75□□□□□ -1.33
SSBP1-212ENST00000489378 NEK7Q8TDX7 302 aa6.75□□□□□ -1.33
SSBP1-212ENST00000489378 TNFAIP8L1Q8WVP5 186 aa6.75□□□□□ -1.33
SSBP1-212ENST00000489378 TSEN15Q8WW01 171 aaKnown RBP6.75□□□□□ -1.33
SSBP1-212ENST00000489378 MRPS24Q96EL2 167 aaKnown RBP6.75□□□□□ -1.33
SSBP1-212ENST00000489378 USMG5Q96IX5 58 aa6.75□□□□□ -1.33
SSBP1-212ENST00000489378 TRAPPC2LQ9UL33 140 aa6.75□□□□□ -1.33
SSBP1-212ENST00000489378 ST3GAL6Q9Y274 331 aa6.75□□□□□ -1.33
SSBP1-212ENST00000489378 H0YJW9 148 aa6.74□□□□□ -1.33
SSBP1-212ENST00000489378 GABRPO00591 440 aa6.74□□□□□ -1.33
SSBP1-212ENST00000489378 HLA-AP01891 365 aaKnown RBP6.74□□□□□ -1.33
SSBP1-212ENST00000489378 ISG15P05161 165 aa6.74□□□□□ -1.33
SSBP1-212ENST00000489378 CT45A6P0DMU7 189 aa6.74□□□□□ -1.33
SSBP1-212ENST00000489378 CT45A5P0DMU8 189 aa6.74□□□□□ -1.33
SSBP1-212ENST00000489378 CT45A7P0DMV0 189 aa6.74□□□□□ -1.33
SSBP1-212ENST00000489378 RCC1P18754 421 aaPredicted RBP6.74□□□□□ -1.33
SSBP1-212ENST00000489378 PRKACGP22612 351 aa6.74□□□□□ -1.33
SSBP1-212ENST00000489378 CBLN1P23435 193 aa6.74□□□□□ -1.33
SSBP1-212ENST00000489378 MAPK3P27361 379 aaPredicted RBP6.74□□□□□ -1.33
SSBP1-212ENST00000489378 RBM11P57052 281 aaKnown RBP6.74□□□□□ -1.33
SSBP1-212ENST00000489378 NANOS3P60323 173 aaKnown RBP6.74□□□□□ -1.33
SSBP1-212ENST00000489378 RSU1Q15404 277 aa6.74□□□□□ -1.33
SSBP1-212ENST00000489378 ATAD3CQ5T2N8 411 aa6.74□□□□□ -1.33
SSBP1-212ENST00000489378 ZNF57Q68EA5 555 aaPredicted RBP6.74□□□□□ -1.33
SSBP1-212ENST00000489378 STPG3Q8N7X2 389 aa6.74□□□□□ -1.33
SSBP1-212ENST00000489378 GHSRQ92847 366 aa6.74□□□□□ -1.33
SSBP1-212ENST00000489378 CYYR1Q96J86 154 aa6.74□□□□□ -1.33
SSBP1-212ENST00000489378 TEX12Q9BXU0 123 aa6.74□□□□□ -1.33
SSBP1-212ENST00000489378 COA4Q9NYJ1 87 aa6.74□□□□□ -1.33
SSBP1-212ENST00000489378 MLXQ9UH92 298 aa6.74□□□□□ -1.33
SSBP1-212ENST00000489378 GNG8Q9UK08 70 aa6.74□□□□□ -1.33
SSBP1-212ENST00000489378 ING4Q9UNL4 249 aa6.74□□□□□ -1.33
SSBP1-212ENST00000489378 KIR2DL5BA0A0G2JN68 375 aa6.73□□□□□ -1.33
SSBP1-212ENST00000489378 KIR2DL5BA0A0G2JPC4 375 aa6.73□□□□□ -1.33
SSBP1-212ENST00000489378 LINC00854A0A1B0GVQ3 168 aa6.73□□□□□ -1.33
SSBP1-212ENST00000489378 C16orf90A8MZG2 172 aa6.73□□□□□ -1.33
SSBP1-212ENST00000489378 H7C2Y5 167 aa6.73□□□□□ -1.33
SSBP1-212ENST00000489378 SLC22A1O15245 554 aa6.73□□□□□ -1.33
SSBP1-212ENST00000489378 DEFB4AO15263 64 aa6.73□□□□□ -1.33
SSBP1-212ENST00000489378 SULT1B1O43704 296 aa6.73□□□□□ -1.33
SSBP1-212ENST00000489378 CDRT1O95170 752 aa6.73□□□□□ -1.33
SSBP1-212ENST00000489378 OR2T7P0C7T2 308 aa6.73□□□□□ -1.33
SSBP1-212ENST00000489378 RPL35AP18077 110 aaKnown RBP6.73□□□□□ -1.33
SSBP1-212ENST00000489378 PJVKQ0ZLH3 352 aa6.73□□□□□ -1.33
SSBP1-212ENST00000489378 EXOSC2Q13868 293 aaKnown RBP6.73□□□□□ -1.33
SSBP1-212ENST00000489378 RBMY1FQ15415 496 aaKnown RBP6.73□□□□□ -1.33
SSBP1-212ENST00000489378 ANKRD55Q3KP44 614 aa6.73□□□□□ -1.33
SSBP1-212ENST00000489378 RPL39P5Q59GN2 51 aa6.73□□□□□ -1.33
SSBP1-212ENST00000489378 C6orf183Q5T699 404 aa6.73□□□□□ -1.33
SSBP1-212ENST00000489378 ASCL4Q6XD76 172 aa6.73□□□□□ -1.33
SSBP1-212ENST00000489378 KIR2DL5AQ8N109 375 aa6.73□□□□□ -1.33
SSBP1-212ENST00000489378 OR10H4Q8NGA5 316 aa6.73□□□□□ -1.33
SSBP1-212ENST00000489378 OR52N1Q8NH53 320 aa6.73□□□□□ -1.33
SSBP1-212ENST00000489378 KIR2DL5BQ8NHK3 375 aa6.73□□□□□ -1.33
SSBP1-212ENST00000489378 KCNG3Q8TAE7 436 aa6.73□□□□□ -1.33
SSBP1-212ENST00000489378 FAM192AQ9GZU8 254 aa6.73□□□□□ -1.33
SSBP1-212ENST00000489378 IFI27L2Q9H2X8 130 aa6.73□□□□□ -1.33
SSBP1-212ENST00000489378 MAGIXQ9H6Y5 334 aa6.73□□□□□ -1.33
SSBP1-212ENST00000489378 TAF9BQ9HBM6 251 aa6.73□□□□□ -1.33
SSBP1-212ENST00000489378 UBQLN2Q9UHD9 624 aa6.73□□□□□ -1.33
SSBP1-212ENST00000489378 ZNF230Q9UIE0 474 aaPredicted RBP6.73□□□□□ -1.33
SSBP1-212ENST00000489378 WASHC3Q9Y3C0 194 aa6.73□□□□□ -1.33
SSBP1-212ENST00000489378 SRRM2Q9UQ35 2752 aaKnown RBP6.72□□□□□ -1.33
SSBP1-212ENST00000489378 OR5H14A6NHG9 310 aa6.72□□□□□ -1.33
SSBP1-212ENST00000489378 NOTOA8MTQ0 251 aa6.72□□□□□ -1.33
SSBP1-212ENST00000489378 FAM90A23PA8MXZ1 464 aa6.72□□□□□ -1.33
SSBP1-212ENST00000489378 PPP5D1E7EU14 171 aa6.72□□□□□ -1.33
SSBP1-212ENST00000489378 H3BNX3 289 aa6.72□□□□□ -1.33
SSBP1-212ENST00000489378 SNX3O60493 162 aa6.72□□□□□ -1.33
SSBP1-212ENST00000489378 CCDC22O60826 627 aa6.72□□□□□ -1.33
SSBP1-212ENST00000489378 APELAP0DMC3 54 aa6.72□□□□□ -1.33
SSBP1-212ENST00000489378 LGALS7P47929 136 aa6.72□□□□□ -1.33
SSBP1-212ENST00000489378 EFNB1P98172 346 aa6.72□□□□□ -1.33
SSBP1-212ENST00000489378 ZNF85Q03923 595 aa6.72□□□□□ -1.33
SSBP1-212ENST00000489378 RIPK1Q13546 671 aa6.72□□□□□ -1.33
SSBP1-212ENST00000489378 ZNF674Q2M3X9 581 aa6.72□□□□□ -1.33
SSBP1-212ENST00000489378 NHLRC3Q5JS37 347 aa6.72□□□□□ -1.33
SSBP1-212ENST00000489378 NXNL2Q5VZ03 156 aa6.72□□□□□ -1.33
SSBP1-212ENST00000489378 STX19Q8N4C7 294 aa6.72□□□□□ -1.33
SSBP1-212ENST00000489378 POM121L12Q8N7R1 296 aa6.72□□□□□ -1.33
SSBP1-212ENST00000489378 CMTM5Q96DZ9 223 aa6.72□□□□□ -1.33
SSBP1-212ENST00000489378 GPER1Q99527 375 aa6.72□□□□□ -1.33
SSBP1-212ENST00000489378 C11orf68Q9H3H3 251 aaKnown RBP6.72□□□□□ -1.33
SSBP1-212ENST00000489378 ZNF556Q9HAH1 456 aa6.72□□□□□ -1.33
SSBP1-212ENST00000489378 RAB9BQ9NP90 201 aa6.72□□□□□ -1.33
SSBP1-212ENST00000489378 AKIP1Q9NQ31 210 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms