RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 ZNF691Q5VV52 312 aa8.34□□□□□ -1.07
HDAC6-233ENST00000489352 FAM71F2Q6NXP2 309 aa8.34□□□□□ -1.07
HDAC6-233ENST00000489352 Q8NAQ8 132 aa8.34□□□□□ -1.07
HDAC6-233ENST00000489352 NECAP1Q8NC96 275 aa8.34□□□□□ -1.07
HDAC6-233ENST00000489352 OR10K1Q8NGX5 313 aa8.34□□□□□ -1.07
HDAC6-233ENST00000489352 SULT4A1Q9BR01 284 aa8.34□□□□□ -1.07
HDAC6-233ENST00000489352 NICN1Q9BSH3 213 aa8.34□□□□□ -1.07
HDAC6-233ENST00000489352 C5orf66Q9H5L9 145 aa8.34□□□□□ -1.07
HDAC6-233ENST00000489352 H2AFY2Q9P0M6 372 aaPredicted RBP8.34□□□□□ -1.07
HDAC6-233ENST00000489352 MRPL27Q9P0M9 148 aaKnown RBP8.34□□□□□ -1.07
HDAC6-233ENST00000489352 MDFICQ9P1T7 246 aa8.34□□□□□ -1.07
HDAC6-233ENST00000489352 METTL15A6NJ78 407 aa8.33□□□□□ -1.08
HDAC6-233ENST00000489352 TSPAN4O14817 238 aa8.33□□□□□ -1.08
HDAC6-233ENST00000489352 S1PR2O95136 353 aa8.33□□□□□ -1.08
HDAC6-233ENST00000489352 PRH1P02810 166 aa8.33□□□□□ -1.08
HDAC6-233ENST00000489352 GSTT2P0CG29 244 aa8.33□□□□□ -1.08
HDAC6-233ENST00000489352 GSTT2BP0CG30 244 aa8.33□□□□□ -1.08
HDAC6-233ENST00000489352 MIFP14174 115 aa8.33□□□□□ -1.08
HDAC6-233ENST00000489352 CMC4P56277 68 aaPredicted RBP8.33□□□□□ -1.08
HDAC6-233ENST00000489352 C15orf32Q32M92 178 aa8.33□□□□□ -1.08
HDAC6-233ENST00000489352 GLT8D1Q68CQ7 371 aa8.33□□□□□ -1.08
HDAC6-233ENST00000489352 CD300LDQ6UXZ3 194 aa8.33□□□□□ -1.08
HDAC6-233ENST00000489352 PXT1Q8NFP0 134 aa8.33□□□□□ -1.08
HDAC6-233ENST00000489352 OR13C3Q8NGS6 347 aa8.33□□□□□ -1.08
HDAC6-233ENST00000489352 OR10AC1Q8NH08 325 aa8.33□□□□□ -1.08
HDAC6-233ENST00000489352 TNFAIP8L1Q8WVP5 186 aa8.33□□□□□ -1.08
HDAC6-233ENST00000489352 NIPSNAP1Q9BPW8 284 aa8.33□□□□□ -1.08
HDAC6-233ENST00000489352 IFT22Q9H7X7 185 aa8.33□□□□□ -1.08
HDAC6-233ENST00000489352 TAF9BQ9HBM6 251 aa8.33□□□□□ -1.08
HDAC6-233ENST00000489352 CLN6Q9NWW5 311 aa8.33□□□□□ -1.08
HDAC6-233ENST00000489352 JPT1Q9UK76 154 aa8.33□□□□□ -1.08
HDAC6-233ENST00000489352 MCRIP1C9JLW8 97 aa8.32□□□□□ -1.08
HDAC6-233ENST00000489352 YPEL1O60688 119 aa8.32□□□□□ -1.08
HDAC6-233ENST00000489352 MYOD1P15172 320 aa8.32□□□□□ -1.08
HDAC6-233ENST00000489352 RPL39P5Q59GN2 51 aa8.32□□□□□ -1.08
HDAC6-233ENST00000489352 PRSS35Q8N3Z0 413 aa8.32□□□□□ -1.08
HDAC6-233ENST00000489352 OR52N1Q8NH53 320 aa8.32□□□□□ -1.08
HDAC6-233ENST00000489352 YPEL2Q96QA6 119 aa8.32□□□□□ -1.08
HDAC6-233ENST00000489352 S100A13Q99584 98 aa8.32□□□□□ -1.08
HDAC6-233ENST00000489352 TBX5Q99593 518 aa8.32□□□□□ -1.08
HDAC6-233ENST00000489352 EFCAB1Q9HAE3 211 aa8.32□□□□□ -1.08
HDAC6-233ENST00000489352 SAR1AQ9NR31 198 aa8.32□□□□□ -1.08
HDAC6-233ENST00000489352 ZNF581Q9P0T4 197 aa8.32□□□□□ -1.08
HDAC6-233ENST00000489352 STEAP1Q9UHE8 339 aa8.32□□□□□ -1.08
HDAC6-233ENST00000489352 TMED3Q9Y3Q3 217 aa8.32□□□□□ -1.08
HDAC6-233ENST00000489352 RNF213Q63HN8 5207 aa8.32□□□□□ -1.08
HDAC6-233ENST00000489352 FAT1Q14517 4588 aa8.31□□□□□ -1.08
HDAC6-233ENST00000489352 CCDC182A6NF36 153 aa8.31□□□□□ -1.08
HDAC6-233ENST00000489352 GEMIN2O14893 280 aaKnown RBP8.31□□□□□ -1.08
HDAC6-233ENST00000489352 SNX3O60493 162 aa8.31□□□□□ -1.08
HDAC6-233ENST00000489352 MRPS14O60783 128 aaKnown RBP8.31□□□□□ -1.08
HDAC6-233ENST00000489352 OR2J3O76001 311 aa8.31□□□□□ -1.08
HDAC6-233ENST00000489352 MAS1P04201 325 aa8.31□□□□□ -1.08
HDAC6-233ENST00000489352 RCC1P18754 421 aaPredicted RBP8.31□□□□□ -1.08
HDAC6-233ENST00000489352 HTD2P86397 168 aa8.31□□□□□ -1.08
HDAC6-233ENST00000489352 PJVKQ0ZLH3 352 aa8.31□□□□□ -1.08
HDAC6-233ENST00000489352 LPCAT4Q643R3 524 aa8.31□□□□□ -1.08
HDAC6-233ENST00000489352 CLEC19AQ6UXS0 136 aa8.31□□□□□ -1.08
HDAC6-233ENST00000489352 FAM220AQ7Z4H9 259 aa8.31□□□□□ -1.08
HDAC6-233ENST00000489352 OR10G2Q8NGC3 310 aa8.31□□□□□ -1.08
HDAC6-233ENST00000489352 OR5AN1Q8NGI8 311 aa8.31□□□□□ -1.08
HDAC6-233ENST00000489352 OR5D14Q8NGL3 314 aa8.31□□□□□ -1.08
HDAC6-233ENST00000489352 PELI1Q96FA3 418 aa8.31□□□□□ -1.08
HDAC6-233ENST00000489352 NSMCE2Q96MF7 247 aa8.31□□□□□ -1.08
HDAC6-233ENST00000489352 REEP1Q9H902 201 aa8.31□□□□□ -1.08
HDAC6-233ENST00000489352 UFC1Q9Y3C8 167 aa8.31□□□□□ -1.08
HDAC6-233ENST00000489352 SAMHD1Q9Y3Z3 626 aaKnown RBP8.31□□□□□ -1.08
HDAC6-233ENST00000489352 TRBV9A0A0B4J1U6 114 aa8.3□□□□□ -1.08
HDAC6-233ENST00000489352 TGOLN2O43493 480 aa8.3□□□□□ -1.08
HDAC6-233ENST00000489352 IGHV3-23P01764 117 aa8.3□□□□□ -1.08
HDAC6-233ENST00000489352 APOA2P02652 100 aa8.3□□□□□ -1.08
HDAC6-233ENST00000489352 ATP6V1B2P21281 511 aa8.3□□□□□ -1.08
HDAC6-233ENST00000489352 RBM11P57052 281 aaKnown RBP8.3□□□□□ -1.08
HDAC6-233ENST00000489352 MPV17LQ2QL34 196 aa8.3□□□□□ -1.08
HDAC6-233ENST00000489352 C12orf74Q32Q52 190 aa8.3□□□□□ -1.08
HDAC6-233ENST00000489352 LIPKQ5VXJ0 399 aa8.3□□□□□ -1.08
HDAC6-233ENST00000489352 Q6ZSN1 163 aa8.3□□□□□ -1.08
HDAC6-233ENST00000489352 GALMQ96C23 342 aa8.3□□□□□ -1.08
HDAC6-233ENST00000489352 C17orf77Q96MU5 243 aa8.3□□□□□ -1.08
HDAC6-233ENST00000489352 FEVQ99581 238 aa8.3□□□□□ -1.08
HDAC6-233ENST00000489352 ATG101Q9BSB4 218 aa8.3□□□□□ -1.08
HDAC6-233ENST00000489352 METTL9Q9H1A3 318 aa8.3□□□□□ -1.08
HDAC6-233ENST00000489352 ARL8BQ9NVJ2 186 aa8.3□□□□□ -1.08
HDAC6-233ENST00000489352 TVP23BQ9NYZ1 205 aa8.3□□□□□ -1.08
HDAC6-233ENST00000489352 ST8SIA5O15466 376 aa8.29□□□□□ -1.08
HDAC6-233ENST00000489352 SULT1C4O75897 302 aa8.29□□□□□ -1.08
HDAC6-233ENST00000489352 SMR3BP02814 79 aaPredicted RBP8.29□□□□□ -1.08
HDAC6-233ENST00000489352 IGKV1-16P04430 117 aa8.29□□□□□ -1.08
HDAC6-233ENST00000489352 C8orf88P0DMB2 117 aa8.29□□□□□ -1.08
HDAC6-233ENST00000489352 FAM3BP58499 235 aaPredicted RBP8.29□□□□□ -1.08
HDAC6-233ENST00000489352 KRTAP10-2P60368 255 aa8.29□□□□□ -1.08
HDAC6-233ENST00000489352 CDK5Q00535 292 aa8.29□□□□□ -1.08
HDAC6-233ENST00000489352 ZNF124Q15973 351 aa8.29□□□□□ -1.08
HDAC6-233ENST00000489352 TNXAQ16473 311 aa8.29□□□□□ -1.08
HDAC6-233ENST00000489352 DMKNQ6E0U4 476 aaPredicted RBP8.29□□□□□ -1.08
HDAC6-233ENST00000489352 WDR93Q6P2C0 686 aa8.29□□□□□ -1.08
HDAC6-233ENST00000489352 TLCD1Q96CP7 247 aa8.29□□□□□ -1.08
HDAC6-233ENST00000489352 FAM210BQ96KR6 192 aa8.29□□□□□ -1.08
HDAC6-233ENST00000489352 SCRT1Q9BWW7 348 aa8.29□□□□□ -1.08
HDAC6-233ENST00000489352 IFI27L2Q9H2X8 130 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms