RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 SSTR5P35346 364 aa15.17■□□□□ 0.02
NPHP4-209ENST00000489180 ATG101Q9BSB4 218 aa15.17■□□□□ 0.02
NPHP4-209ENST00000489180 MS4A5Q9H3V2 200 aa15.17■□□□□ 0.02
NPHP4-209ENST00000489180 MARF1Q9Y4F3 1742 aaKnown RBP15.17■□□□□ 0.02
NPHP4-209ENST00000489180 OR4A47Q6IF82 309 aa15.17■□□□□ 0.02
NPHP4-209ENST00000489180 PQLC2Q6ZP29 291 aa15.17■□□□□ 0.02
NPHP4-209ENST00000489180 ZFP30Q9Y2G7 519 aa15.17■□□□□ 0.02
NPHP4-209ENST00000489180 ADAMTS7Q9UKP4 1686 aa15.17■□□□□ 0.02
NPHP4-209ENST00000489180 RP1L1Q8IWN7 2480 aaPredicted RBP15.17■□□□□ 0.02
NPHP4-209ENST00000489180 CGB1A6NKQ9 187 aa15.17■□□□□ 0.02
NPHP4-209ENST00000489180 RSPO4Q2I0M5 234 aaPredicted RBP15.17■□□□□ 0.02
NPHP4-209ENST00000489180 COL5A1-AS1Q5SY13 56 aa15.17■□□□□ 0.02
NPHP4-209ENST00000489180 LEAP2Q969E1 77 aa15.17■□□□□ 0.02
NPHP4-209ENST00000489180 FCARP24071 287 aa15.16■□□□□ 0.02
NPHP4-209ENST00000489180 FHL5Q5TD97 284 aa15.16■□□□□ 0.02
NPHP4-209ENST00000489180 UNQ9370/PRO34162Q6UXP9 181 aa15.16■□□□□ 0.02
NPHP4-209ENST00000489180 TMEM189A5PLL7 270 aa15.16■□□□□ 0.02
NPHP4-209ENST00000489180 MGST3O14880 152 aa15.16■□□□□ 0.02
NPHP4-209ENST00000489180 CD74P04233 296 aa15.16■□□□□ 0.02
NPHP4-209ENST00000489180 ADRA2AP08913 450 aa15.16■□□□□ 0.02
NPHP4-209ENST00000489180 ZNF735P0CB33 412 aa15.16■□□□□ 0.02
NPHP4-209ENST00000489180 MRPL18Q9H0U6 180 aaKnown RBP15.16■□□□□ 0.02
NPHP4-209ENST00000489180 ZG16O60844 167 aa15.16■□□□□ 0.02
NPHP4-209ENST00000489180 SDHCQ99643 169 aaPredicted RBP15.16■□□□□ 0.02
NPHP4-209ENST00000489180 SLC25A33Q9BSK2 321 aa15.16■□□□□ 0.02
NPHP4-209ENST00000489180 RECKO95980 971 aa15.16■□□□□ 0.02
NPHP4-209ENST00000489180 BTF3P20290 206 aaKnown RBP15.16■□□□□ 0.02
NPHP4-209ENST00000489180 ITLN1Q8WWA0 313 aa15.16■□□□□ 0.02
NPHP4-209ENST00000489180 TP53RKQ96S44 253 aa15.16■□□□□ 0.02
NPHP4-209ENST00000489180 SHISA3A0PJX4 238 aa15.15■□□□□ 0.02
NPHP4-209ENST00000489180 ZNF818PQ6ZRF7 136 aa15.15■□□□□ 0.02
NPHP4-209ENST00000489180 PGLYRP4Q96LB8 373 aa15.15■□□□□ 0.02
NPHP4-209ENST00000489180 DLL3Q9NYJ7 618 aa15.15■□□□□ 0.02
NPHP4-209ENST00000489180 CXorf65A6NEN9 183 aa15.15■□□□□ 0.02
NPHP4-209ENST00000489180 M0R3E3 92 aa15.15■□□□□ 0.02
NPHP4-209ENST00000489180 KLF7O75840 302 aaPredicted RBP15.15■□□□□ 0.02
NPHP4-209ENST00000489180 ZNF502Q8TBZ5 544 aa15.15■□□□□ 0.02
NPHP4-209ENST00000489180 ZNFX1Q9P2E3 1918 aaKnown RBP15.15■□□□□ 0.02
NPHP4-209ENST00000489180 MYO16Q9Y6X6 1858 aa15.15■□□□□ 0.02
NPHP4-209ENST00000489180 KIR2DL2P43627 348 aaPredicted RBP15.15■□□□□ 0.02
NPHP4-209ENST00000489180 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.15■□□□□ 0.02
NPHP4-209ENST00000489180 MPV17P39210 176 aa15.15■□□□□ 0.02
NPHP4-209ENST00000489180 NPBWR2P48146 333 aa15.15■□□□□ 0.02
NPHP4-209ENST00000489180 SRXN1Q9BYN0 137 aa15.15■□□□□ 0.02
NPHP4-209ENST00000489180 ARL14EPLP0DKL9 152 aa15.15■□□□□ 0.02
NPHP4-209ENST00000489180 GCSHP23434 173 aa15.15■□□□□ 0.02
NPHP4-209ENST00000489180 RPL27AP46776 148 aaKnown RBP15.15■□□□□ 0.02
NPHP4-209ENST00000489180 LINC01590Q5TEZ4 76 aa15.15■□□□□ 0.02
NPHP4-209ENST00000489180 GPR61Q9BZJ8 451 aa15.15■□□□□ 0.02
NPHP4-209ENST00000489180 QSER1Q2KHR3 1735 aa15.14■□□□□ 0.01
NPHP4-209ENST00000489180 PGPA6NDG6 321 aa15.14■□□□□ 0.01
NPHP4-209ENST00000489180 CSRP3P50461 194 aa15.14■□□□□ 0.01
NPHP4-209ENST00000489180 LRRC75BQ2VPJ9 315 aa15.14■□□□□ 0.01
NPHP4-209ENST00000489180 VKORC1L1Q8N0U8 176 aa15.14■□□□□ 0.01
NPHP4-209ENST00000489180 ARL6IP6Q8N6S5 226 aa15.14■□□□□ 0.01
NPHP4-209ENST00000489180 ZNF441Q8N8Z8 693 aa15.14■□□□□ 0.01
NPHP4-209ENST00000489180 SGK494Q96LW2 274 aa15.14■□□□□ 0.01
NPHP4-209ENST00000489180 TRIP12Q14669 1992 aaPredicted RBP15.14■□□□□ 0.01
NPHP4-209ENST00000489180 NUDT16L1Q9BRJ7 211 aaKnown RBP15.14■□□□□ 0.01
NPHP4-209ENST00000489180 TGIF1Q15583 401 aa15.14■□□□□ 0.01
NPHP4-209ENST00000489180 APCDD1LQ8NCL9 501 aa15.14■□□□□ 0.01
NPHP4-209ENST00000489180 OR8G5Q8NG78 346 aa15.14■□□□□ 0.01
NPHP4-209ENST00000489180 METTL1Q9UBP6 276 aaKnown RBP15.14■□□□□ 0.01
NPHP4-209ENST00000489180 H3BTX0 84 aa15.14■□□□□ 0.01
NPHP4-209ENST00000489180 KIAA1644Q3SXP7 199 aa15.14■□□□□ 0.01
NPHP4-209ENST00000489180 OR1N2Q8NGR9 330 aa15.14■□□□□ 0.01
NPHP4-209ENST00000489180 A8MWL6 223 aa15.13■□□□□ 0.01
NPHP4-209ENST00000489180 HOXD4P09016 255 aaPredicted RBP15.13■□□□□ 0.01
NPHP4-209ENST00000489180 AREGP15514 252 aa15.13■□□□□ 0.01
NPHP4-209ENST00000489180 RNFT1Q5M7Z0 435 aa15.13■□□□□ 0.01
NPHP4-209ENST00000489180 PET117Q6UWS5 81 aa15.13■□□□□ 0.01
NPHP4-209ENST00000489180 SP7Q8TDD2 431 aaPredicted RBP15.13■□□□□ 0.01
NPHP4-209ENST00000489180 S1PR2O95136 353 aa15.13■□□□□ 0.01
NPHP4-209ENST00000489180 TFPI2P48307 235 aa15.13■□□□□ 0.01
NPHP4-209ENST00000489180 FAM214BQ7L5A3 538 aa15.13■□□□□ 0.01
NPHP4-209ENST00000489180 CISD1Q9NZ45 108 aaKnown RBP15.13■□□□□ 0.01
NPHP4-209ENST00000489180 ZNF362Q5T0B9 420 aaPredicted RBP15.13■□□□□ 0.01
NPHP4-209ENST00000489180 Q96M66 194 aa15.13■□□□□ 0.01
NPHP4-209ENST00000489180 H7C2G1 150 aa15.13■□□□□ 0.01
NPHP4-209ENST00000489180 TMEM187Q14656 261 aa15.13■□□□□ 0.01
NPHP4-209ENST00000489180 C1orf185Q5T7R7 199 aa15.13■□□□□ 0.01
NPHP4-209ENST00000489180 SLC25A45Q8N413 288 aa15.13■□□□□ 0.01
NPHP4-209ENST00000489180 KCNMB2Q9Y691 235 aa15.13■□□□□ 0.01
NPHP4-209ENST00000489180 KBTBD11O94819 623 aa15.12■□□□□ 0.01
NPHP4-209ENST00000489180 MARS2Q96GW9 593 aaKnown RBP15.12■□□□□ 0.01
NPHP4-209ENST00000489180 HSPB7Q9UBY9 170 aa15.12■□□□□ 0.01
NPHP4-209ENST00000489180 GCGP01275 180 aa15.12■□□□□ 0.01
NPHP4-209ENST00000489180 THY1P04216 161 aa15.12■□□□□ 0.01
NPHP4-209ENST00000489180 NUBP1P53384 320 aa15.12■□□□□ 0.01
NPHP4-209ENST00000489180 GFRA1P56159 465 aa15.12■□□□□ 0.01
NPHP4-209ENST00000489180 ZP1P60852 638 aa15.12■□□□□ 0.01
NPHP4-209ENST00000489180 SLC25A53Q5H9E4 307 aa15.12■□□□□ 0.01
NPHP4-209ENST00000489180 ABLIM2Q6H8Q1 611 aa15.12■□□□□ 0.01
NPHP4-209ENST00000489180 GRIFINA4D1Z8 144 aa15.12■□□□□ 0.01
NPHP4-209ENST00000489180 SIAH2O43255 324 aa15.12■□□□□ 0.01
NPHP4-209ENST00000489180 REG1AP05451 166 aa15.12■□□□□ 0.01
NPHP4-209ENST00000489180 LOXL3P58215 753 aa15.12■□□□□ 0.01
NPHP4-209ENST00000489180 RTN4RQ9BZR6 473 aa15.12■□□□□ 0.01
NPHP4-209ENST00000489180 COL4A5P29400 1685 aa15.12■□□□□ 0.01
NPHP4-209ENST00000489180 EGR4Q05215 589 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms