RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 DRAXINQ8NBI3 349 aaPredicted RBP12.15□□□□□ -0.46
USP48-210ENST00000489108 IL1F10Q8WWZ1 152 aa12.15□□□□□ -0.46
USP48-210ENST00000489108 SNAPC3Q92966 411 aa12.15□□□□□ -0.46
USP48-210ENST00000489108 TSNAXQ99598 290 aaKnown RBP12.15□□□□□ -0.46
USP48-210ENST00000489108 STEAP1Q9UHE8 339 aa12.15□□□□□ -0.46
USP48-210ENST00000489108 KLK5Q9Y337 293 aaPredicted RBP12.15□□□□□ -0.46
USP48-210ENST00000489108 LRRC42Q9Y546 428 aa12.15□□□□□ -0.46
USP48-210ENST00000489108 SNTNA6NMZ2 147 aa12.14□□□□□ -0.47
USP48-210ENST00000489108 IGKV1-16P04430 117 aa12.14□□□□□ -0.47
USP48-210ENST00000489108 CPEP16870 476 aa12.14□□□□□ -0.47
USP48-210ENST00000489108 IGFBP3P17936 291 aaPredicted RBP12.14□□□□□ -0.47
USP48-210ENST00000489108 LINC00205P59089 165 aa12.14□□□□□ -0.47
USP48-210ENST00000489108 PJVKQ0ZLH3 352 aa12.14□□□□□ -0.47
USP48-210ENST00000489108 RIPK1Q13546 671 aa12.14□□□□□ -0.47
USP48-210ENST00000489108 HMGN3Q15651 99 aa12.14□□□□□ -0.47
USP48-210ENST00000489108 C6orf141Q5SZD1 244 aa12.14□□□□□ -0.47
USP48-210ENST00000489108 DYNLRB2Q8TF09 96 aa12.14□□□□□ -0.47
USP48-210ENST00000489108 USMG5Q96IX5 58 aa12.14□□□□□ -0.47
USP48-210ENST00000489108 OR14A2Q96R54 314 aa12.14□□□□□ -0.47
USP48-210ENST00000489108 AMBNQ9NP70 447 aa12.14□□□□□ -0.47
USP48-210ENST00000489108 OAZ3Q9UMX2 235 aa12.14□□□□□ -0.47
USP48-210ENST00000489108 VPS13DQ5THJ4 4388 aa12.14□□□□□ -0.47
USP48-210ENST00000489108 FAM90A7PA6NKC0 464 aa12.13□□□□□ -0.47
USP48-210ENST00000489108 FAM90A23PA8MXZ1 464 aa12.13□□□□□ -0.47
USP48-210ENST00000489108 H3BNX3 289 aa12.13□□□□□ -0.47
USP48-210ENST00000489108 PROP1O75360 226 aa12.13□□□□□ -0.47
USP48-210ENST00000489108 MGMTP16455 207 aa12.13□□□□□ -0.47
USP48-210ENST00000489108 EDN2P20800 178 aa12.13□□□□□ -0.47
USP48-210ENST00000489108 DNAL1Q4LDG9 190 aa12.13□□□□□ -0.47
USP48-210ENST00000489108 KCTD12Q96CX2 325 aaKnown RBP12.13□□□□□ -0.47
USP48-210ENST00000489108 WDR89Q96FK6 387 aaPredicted RBP12.13□□□□□ -0.47
USP48-210ENST00000489108 AP4S1Q9Y587 144 aa12.13□□□□□ -0.47
USP48-210ENST00000489108 A0A0B4J203 849 aa12.12□□□□□ -0.47
USP48-210ENST00000489108 BMPR1BO00238 502 aa12.12□□□□□ -0.47
USP48-210ENST00000489108 PDCD6O75340 191 aa12.12□□□□□ -0.47
USP48-210ENST00000489108 SPDEFO95238 335 aa12.12□□□□□ -0.47
USP48-210ENST00000489108 KIR2DS2P43631 304 aa12.12□□□□□ -0.47
USP48-210ENST00000489108 LGALS7P47929 136 aa12.12□□□□□ -0.47
USP48-210ENST00000489108 LGALS9CQ6DKI2 356 aa12.12□□□□□ -0.47
USP48-210ENST00000489108 AWAT2Q6E213 333 aa12.12□□□□□ -0.47
USP48-210ENST00000489108 RPL22L1Q6P5R6 122 aaKnown RBP12.12□□□□□ -0.47
USP48-210ENST00000489108 JAGN1Q8N5M9 183 aa12.12□□□□□ -0.47
USP48-210ENST00000489108 OR13C5Q8NGS8 318 aa12.12□□□□□ -0.47
USP48-210ENST00000489108 Q96M66 194 aa12.12□□□□□ -0.47
USP48-210ENST00000489108 TMEM68Q96MH6 324 aa12.12□□□□□ -0.47
USP48-210ENST00000489108 AGMATQ9BSE5 352 aa12.12□□□□□ -0.47
USP48-210ENST00000489108 GGTLC1Q9BX51 225 aa12.12□□□□□ -0.47
USP48-210ENST00000489108 COA4Q9NYJ1 87 aa12.12□□□□□ -0.47
USP48-210ENST00000489108 ABRACLQ9P1F3 81 aa12.12□□□□□ -0.47
USP48-210ENST00000489108 SELENOKQ9Y6D0 94 aa12.12□□□□□ -0.47
USP48-210ENST00000489108 TRAV8-7A0A075B6U6 113 aa12.11□□□□□ -0.47
USP48-210ENST00000489108 SAC3D1A6NKF1 404 aa12.11□□□□□ -0.47
USP48-210ENST00000489108 CRTAPO75718 401 aaPredicted RBP12.11□□□□□ -0.47
USP48-210ENST00000489108 APELAP0DMC3 54 aa12.11□□□□□ -0.47
USP48-210ENST00000489108 TNFRSF9Q07011 255 aa12.11□□□□□ -0.47
USP48-210ENST00000489108 LYG2Q86SG7 212 aa12.11□□□□□ -0.47
USP48-210ENST00000489108 ZNF383Q8NA42 475 aa12.11□□□□□ -0.47
USP48-210ENST00000489108 CCDC197Q8NCU1 140 aa12.11□□□□□ -0.47
USP48-210ENST00000489108 OR52I1Q8NGK6 324 aa12.11□□□□□ -0.47
USP48-210ENST00000489108 ZC4H2Q9NQZ6 224 aa12.11□□□□□ -0.47
USP48-210ENST00000489108 LOC102724200A0A096LPH7 203 aaPredicted RBP12.1□□□□□ -0.47
USP48-210ENST00000489108 LIMS3P0CW19 117 aa12.1□□□□□ -0.47
USP48-210ENST00000489108 LIMS4P0CW20 117 aa12.1□□□□□ -0.47
USP48-210ENST00000489108 FOLR2P14207 255 aa12.1□□□□□ -0.47
USP48-210ENST00000489108 GABRB1P18505 474 aa12.1□□□□□ -0.47
USP48-210ENST00000489108 ZIK1Q3SY52 487 aaPredicted RBP12.1□□□□□ -0.47
USP48-210ENST00000489108 CCDC58Q4VC31 144 aa12.1□□□□□ -0.47
USP48-210ENST00000489108 SLC16A13Q7RTY0 426 aa12.1□□□□□ -0.47
USP48-210ENST00000489108 SLC7A6OSQ96CW6 309 aaPredicted RBP12.1□□□□□ -0.47
USP48-210ENST00000489108 SULT4A1Q9BR01 284 aa12.1□□□□□ -0.47
USP48-210ENST00000489108 FAAP24Q9BTP7 215 aa12.1□□□□□ -0.47
USP48-210ENST00000489108 C11orf54Q9H0W9 315 aaPredicted RBP12.1□□□□□ -0.47
USP48-210ENST00000489108 C2orf70A6NJV1 201 aa12.09□□□□□ -0.47
USP48-210ENST00000489108 NDUFB8O95169 186 aa12.09□□□□□ -0.47
USP48-210ENST00000489108 IGLV2-23P01705 113 aa12.09□□□□□ -0.47
USP48-210ENST00000489108 CRYGBP07316 175 aa12.09□□□□□ -0.47
USP48-210ENST00000489108 WFDC3Q8IUB2 231 aa12.09□□□□□ -0.47
USP48-210ENST00000489108 FAM46BQ96A09 425 aa12.09□□□□□ -0.47
USP48-210ENST00000489108 CENPNQ96H22 339 aaPredicted RBP12.09□□□□□ -0.47
USP48-210ENST00000489108 TECRQ9NZ01 308 aaKnown RBP12.09□□□□□ -0.47
USP48-210ENST00000489108 TRBV5-5A0A0J9YX44 114 aa12.08□□□□□ -0.48
USP48-210ENST00000489108 A0A1W2PPK0 400 aa12.08□□□□□ -0.48
USP48-210ENST00000489108 MSGN1A6NI15 193 aa12.08□□□□□ -0.48
USP48-210ENST00000489108 ITGB1BP1O14713 200 aa12.08□□□□□ -0.48
USP48-210ENST00000489108 OGG1O15527 345 aa12.08□□□□□ -0.48
USP48-210ENST00000489108 FCGR1AP12314 374 aa12.08□□□□□ -0.48
USP48-210ENST00000489108 CEACAM6P40199 344 aa12.08□□□□□ -0.48
USP48-210ENST00000489108 PDPNQ86YL7 162 aa12.08□□□□□ -0.48
USP48-210ENST00000489108 ADAD2Q8NCV1 583 aaKnown RBP12.08□□□□□ -0.48
USP48-210ENST00000489108 AKIP1Q9NQ31 210 aa12.08□□□□□ -0.48
USP48-210ENST00000489108 CKLFQ9UBR5 152 aa12.08□□□□□ -0.48
USP48-210ENST00000489108 SPRY2O43597 315 aa12.07□□□□□ -0.48
USP48-210ENST00000489108 APOA2P02652 100 aa12.07□□□□□ -0.48
USP48-210ENST00000489108 PRH1P02810 166 aa12.07□□□□□ -0.48
USP48-210ENST00000489108 ALPLP05186 524 aa12.07□□□□□ -0.48
USP48-210ENST00000489108 RHOGP84095 191 aa12.07□□□□□ -0.48
USP48-210ENST00000489108 ATP5G2Q06055 141 aa12.07□□□□□ -0.48
USP48-210ENST00000489108 EXOSC2Q13868 293 aaKnown RBP12.07□□□□□ -0.48
USP48-210ENST00000489108 OR2G6Q5TZ20 316 aa12.07□□□□□ -0.48
USP48-210ENST00000489108 SVOPQ8N4V2 548 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms