RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 OR2F2O95006 317 aa12.81□□□□□ -0.36
HDAC7-224ENST00000488927 PPYP01298 95 aa12.81□□□□□ -0.36
HDAC7-224ENST00000488927 PMP2P02689 132 aa12.81□□□□□ -0.36
HDAC7-224ENST00000488927 SNRNP70P08621 437 aaKnown RBP12.81□□□□□ -0.36
HDAC7-224ENST00000488927 CSF1P09603 554 aa12.81□□□□□ -0.36
HDAC7-224ENST00000488927 MC5RP33032 325 aa12.81□□□□□ -0.36
HDAC7-224ENST00000488927 TAS2R19P59542 299 aa12.81□□□□□ -0.36
HDAC7-224ENST00000488927 DGCR2P98153 550 aa12.81□□□□□ -0.36
HDAC7-224ENST00000488927 SRSF2Q01130 221 aaKnown RBP12.81□□□□□ -0.36
HDAC7-224ENST00000488927 LSAMPQ13449 338 aa12.81□□□□□ -0.36
HDAC7-224ENST00000488927 EBI3Q14213 229 aa12.81□□□□□ -0.36
HDAC7-224ENST00000488927 HES1Q14469 280 aa12.81□□□□□ -0.36
HDAC7-224ENST00000488927 MSMO1Q15800 293 aa12.81□□□□□ -0.36
HDAC7-224ENST00000488927 RPL39P5Q59GN2 51 aa12.81□□□□□ -0.36
HDAC7-224ENST00000488927 RNASE12Q5GAN4 147 aaKnown RBP12.81□□□□□ -0.36
HDAC7-224ENST00000488927 LINC00299Q6ZSB3 139 aa12.81□□□□□ -0.36
HDAC7-224ENST00000488927 ZNF645Q8N7E2 425 aa12.81□□□□□ -0.36
HDAC7-224ENST00000488927 OR6F1Q8NGZ6 308 aa12.81□□□□□ -0.36
HDAC7-224ENST00000488927 OR2T10Q8NGZ9 312 aa12.81□□□□□ -0.36
HDAC7-224ENST00000488927 BORCS5Q969J3 196 aa12.81□□□□□ -0.36
HDAC7-224ENST00000488927 NABP2Q9BQ15 211 aa12.81□□□□□ -0.36
HDAC7-224ENST00000488927 MRPL20Q9BYC9 149 aaKnown RBP12.81□□□□□ -0.36
HDAC7-224ENST00000488927 RBMX2Q9Y388 322 aaKnown RBP12.81□□□□□ -0.36
HDAC7-224ENST00000488927 ATRQ13535 2644 aa12.8□□□□□ -0.36
HDAC7-224ENST00000488927 M0QZK8 103 aa12.8□□□□□ -0.36
HDAC7-224ENST00000488927 MOSP00540 346 aa12.8□□□□□ -0.36
HDAC7-224ENST00000488927 IGKV1D-33P01593 117 aa12.8□□□□□ -0.36
HDAC7-224ENST00000488927 IGKV1-33P01594 117 aa12.8□□□□□ -0.36
HDAC7-224ENST00000488927 RFX2P48378 723 aa12.8□□□□□ -0.36
HDAC7-224ENST00000488927 HERV-K104P61576 105 aa12.8□□□□□ -0.36
HDAC7-224ENST00000488927 TSPAN5P62079 268 aa12.8□□□□□ -0.36
HDAC7-224ENST00000488927 TAGLNQ01995 201 aaKnown RBP12.8□□□□□ -0.36
HDAC7-224ENST00000488927 CNPY1Q3B7I2 92 aa12.8□□□□□ -0.36
HDAC7-224ENST00000488927 KRTAP24-1Q3LI83 254 aa12.8□□□□□ -0.36
HDAC7-224ENST00000488927 RNASE10Q5GAN6 216 aaKnown RBP12.8□□□□□ -0.36
HDAC7-224ENST00000488927 VAX1Q5SQQ9 334 aa12.8□□□□□ -0.36
HDAC7-224ENST00000488927 TMEM17Q86X19 198 aa12.8□□□□□ -0.36
HDAC7-224ENST00000488927 TMEM229BQ8NBD8 167 aa12.8□□□□□ -0.36
HDAC7-224ENST00000488927 RBM14Q96PK6 669 aaKnown RBP12.8□□□□□ -0.36
HDAC7-224ENST00000488927 NPFFR1Q9GZQ6 430 aa12.8□□□□□ -0.36
HDAC7-224ENST00000488927 RANBP3Q9H6Z4 567 aaPredicted RBP12.8□□□□□ -0.36
HDAC7-224ENST00000488927 SDHAF2Q9NX18 166 aa12.8□□□□□ -0.36
HDAC7-224ENST00000488927 V9GYH0 126 aa12.8□□□□□ -0.36
HDAC7-224ENST00000488927 RNF212BA8MTL3 300 aa12.79□□□□□ -0.36
HDAC7-224ENST00000488927 M0R1X1 148 aa12.79□□□□□ -0.36
HDAC7-224ENST00000488927 IFNA6P05013 189 aa12.79□□□□□ -0.36
HDAC7-224ENST00000488927 CT45A6P0DMU7 189 aa12.79□□□□□ -0.36
HDAC7-224ENST00000488927 CT45A5P0DMU8 189 aa12.79□□□□□ -0.36
HDAC7-224ENST00000488927 CT45A7P0DMV0 189 aa12.79□□□□□ -0.36
HDAC7-224ENST00000488927 HKR1P10072 659 aa12.79□□□□□ -0.36
HDAC7-224ENST00000488927 TMEM11P17152 192 aa12.79□□□□□ -0.36
HDAC7-224ENST00000488927 AADACP22760 399 aa12.79□□□□□ -0.36
HDAC7-224ENST00000488927 CD24P25063 80 aa12.79□□□□□ -0.36
HDAC7-224ENST00000488927 PYDC2Q56P42 97 aa12.79□□□□□ -0.36
HDAC7-224ENST00000488927 CCBE1Q6UXH8 406 aaPredicted RBP12.79□□□□□ -0.36
HDAC7-224ENST00000488927 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.79□□□□□ -0.36
HDAC7-224ENST00000488927 ZBTB34Q8NCN2 500 aa12.79□□□□□ -0.36
HDAC7-224ENST00000488927 OR8H1Q8NGG4 311 aa12.79□□□□□ -0.36
HDAC7-224ENST00000488927 ADTRPQ96IZ2 230 aa12.79□□□□□ -0.36
HDAC7-224ENST00000488927 ZNF2Q9BSG1 426 aaPredicted RBP12.79□□□□□ -0.36
HDAC7-224ENST00000488927 SLC25A33Q9BSK2 321 aa12.79□□□□□ -0.36
HDAC7-224ENST00000488927 IGHV3-72A0A0B4J1Y9 119 aa12.78□□□□□ -0.36
HDAC7-224ENST00000488927 NDUFA7O95182 113 aa12.78□□□□□ -0.36
HDAC7-224ENST00000488927 APOA2P02652 100 aa12.78□□□□□ -0.36
HDAC7-224ENST00000488927 CD74P04233 296 aa12.78□□□□□ -0.36
HDAC7-224ENST00000488927 CD3DP04234 171 aa12.78□□□□□ -0.36
HDAC7-224ENST00000488927 THBS3P49746 956 aa12.78□□□□□ -0.36
HDAC7-224ENST00000488927 MEF2DQ14814 521 aa12.78□□□□□ -0.36
HDAC7-224ENST00000488927 ZNF660Q6AZW8 331 aaPredicted RBP12.78□□□□□ -0.36
HDAC7-224ENST00000488927 TMEM219Q86XT9 240 aa12.78□□□□□ -0.36
HDAC7-224ENST00000488927 Q8N402 240 aa12.78□□□□□ -0.36
HDAC7-224ENST00000488927 ARRDC1Q8N5I2 433 aa12.78□□□□□ -0.36
HDAC7-224ENST00000488927 OR5AN1Q8NGI8 311 aa12.78□□□□□ -0.36
HDAC7-224ENST00000488927 OR4C13Q8NGP0 309 aa12.78□□□□□ -0.36
HDAC7-224ENST00000488927 MOB3AQ96BX8 217 aa12.78□□□□□ -0.36
HDAC7-224ENST00000488927 EAF1Q96JC9 268 aaPredicted RBP12.78□□□□□ -0.36
HDAC7-224ENST00000488927 THAP7Q9BT49 309 aaPredicted RBP12.78□□□□□ -0.36
HDAC7-224ENST00000488927 C19orf24Q9BVV8 132 aa12.78□□□□□ -0.36
HDAC7-224ENST00000488927 PTTG2Q9NZH5 202 aa12.78□□□□□ -0.36
HDAC7-224ENST00000488927 C1RLQ9NZP8 487 aa12.78□□□□□ -0.36
HDAC7-224ENST00000488927 MOB4Q9Y3A3 225 aa12.78□□□□□ -0.36
HDAC7-224ENST00000488927 IGKV1D-13A0A0B4J2D9 117 aa12.77□□□□□ -0.37
HDAC7-224ENST00000488927 A0A1B0GUS0 222 aa12.77□□□□□ -0.37
HDAC7-224ENST00000488927 J3QRK9 145 aa12.77□□□□□ -0.37
HDAC7-224ENST00000488927 CHST1O43916 411 aa12.77□□□□□ -0.37
HDAC7-224ENST00000488927 PROP1O75360 226 aa12.77□□□□□ -0.37
HDAC7-224ENST00000488927 IGKV1-13P0DP09 117 aa12.77□□□□□ -0.37
HDAC7-224ENST00000488927 AP3S2P59780 193 aa12.77□□□□□ -0.37
HDAC7-224ENST00000488927 ZNF45Q02386 682 aa12.77□□□□□ -0.37
HDAC7-224ENST00000488927 FOXL1Q12952 345 aa12.77□□□□□ -0.37
HDAC7-224ENST00000488927 CBX3Q13185 183 aa12.77□□□□□ -0.37
HDAC7-224ENST00000488927 STEAP1BQ6NZ63 245 aa12.77□□□□□ -0.37
HDAC7-224ENST00000488927 LPCAT3Q6P1A2 487 aa12.77□□□□□ -0.37
HDAC7-224ENST00000488927 OR4F5Q8NH21 305 aa12.77□□□□□ -0.37
HDAC7-224ENST00000488927 SECTM1Q8WVN6 248 aa12.77□□□□□ -0.37
HDAC7-224ENST00000488927 HSD17B10Q99714 261 aaKnown RBP12.77□□□□□ -0.37
HDAC7-224ENST00000488927 RNF5Q99942 180 aa12.77□□□□□ -0.37
HDAC7-224ENST00000488927 SLC5A7Q9GZV3 580 aa12.77□□□□□ -0.37
HDAC7-224ENST00000488927 WASHC3Q9Y3C0 194 aa12.77□□□□□ -0.37
HDAC7-224ENST00000488927 TMEM89A2RUT3 159 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms