RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 FKBP14Q9NWM8 211 aa14.19□□□□□ -0.14
HDAC6-231ENST00000488905 A0A0A6YYD4 124 aa14.18□□□□□ -0.14
HDAC6-231ENST00000488905 TRBV6-6A0A0A6YYG2 114 aa14.18□□□□□ -0.14
HDAC6-231ENST00000488905 EBAG9O00559 213 aa14.18□□□□□ -0.14
HDAC6-231ENST00000488905 SLC22A1O15245 554 aa14.18□□□□□ -0.14
HDAC6-231ENST00000488905 CA2P00918 260 aa14.18□□□□□ -0.14
HDAC6-231ENST00000488905 TPPP2P59282 170 aa14.18□□□□□ -0.14
HDAC6-231ENST00000488905 HLA-DRB3P79483 266 aa14.18□□□□□ -0.14
HDAC6-231ENST00000488905 QRFPP83859 136 aa14.18□□□□□ -0.14
HDAC6-231ENST00000488905 AKIRIN2Q53H80 203 aa14.18□□□□□ -0.14
HDAC6-231ENST00000488905 EDARADDQ8WWZ3 215 aa14.18□□□□□ -0.14
HDAC6-231ENST00000488905 FLYWCH2Q96CP2 140 aaKnown RBP14.18□□□□□ -0.14
HDAC6-231ENST00000488905 CLCC1Q96S66 551 aa14.18□□□□□ -0.14
HDAC6-231ENST00000488905 RNF5Q99942 180 aa14.18□□□□□ -0.14
HDAC6-231ENST00000488905 HDHD3Q9BSH5 251 aaPredicted RBP14.18□□□□□ -0.14
HDAC6-231ENST00000488905 MND1Q9BWT6 205 aa14.18□□□□□ -0.14
HDAC6-231ENST00000488905 ZMAT4Q9H898 229 aa14.18□□□□□ -0.14
HDAC6-231ENST00000488905 OR1A1Q9P1Q5 309 aa14.18□□□□□ -0.14
HDAC6-231ENST00000488905 METTL1Q9UBP6 276 aaKnown RBP14.18□□□□□ -0.14
HDAC6-231ENST00000488905 TNCP24821 2201 aa14.18□□□□□ -0.14
HDAC6-231ENST00000488905 SPDEFO95238 335 aa14.17□□□□□ -0.14
HDAC6-231ENST00000488905 BPNT1O95861 308 aa14.17□□□□□ -0.14
HDAC6-231ENST00000488905 HSPB1P04792 205 aaKnown RBP14.17□□□□□ -0.14
HDAC6-231ENST00000488905 TFAP2AP05549 437 aa14.17□□□□□ -0.14
HDAC6-231ENST00000488905 PSG5Q15238 335 aa14.17□□□□□ -0.14
HDAC6-231ENST00000488905 SRSF7Q16629 238 aaKnown RBP eCLIP14.17□□□□□ -0.14
HDAC6-231ENST00000488905 HSD17B12Q53GQ0 312 aa14.17□□□□□ -0.14
HDAC6-231ENST00000488905 ZNF562Q6V9R5 426 aa14.17□□□□□ -0.14
HDAC6-231ENST00000488905 LFNGQ8NES3 379 aa14.17□□□□□ -0.14
HDAC6-231ENST00000488905 OR6M1Q8NGM8 313 aa14.17□□□□□ -0.14
HDAC6-231ENST00000488905 MS4A10Q96PG2 267 aa14.17□□□□□ -0.14
HDAC6-231ENST00000488905 OR4C12Q96R67 309 aa14.17□□□□□ -0.14
HDAC6-231ENST00000488905 C11orf54Q9H0W9 315 aaPredicted RBP14.17□□□□□ -0.14
HDAC6-231ENST00000488905 RIMS4Q9H426 269 aaPredicted RBP14.17□□□□□ -0.14
HDAC6-231ENST00000488905 SLA2Q9H6Q3 261 aa14.17□□□□□ -0.14
HDAC6-231ENST00000488905 AK3Q9UIJ7 227 aa14.17□□□□□ -0.14
HDAC6-231ENST00000488905 HSPA12AO43301 675 aa14.16□□□□□ -0.14
HDAC6-231ENST00000488905 SNRPBP14678 240 aaKnown RBP14.16□□□□□ -0.14
HDAC6-231ENST00000488905 CPEP16870 476 aa14.16□□□□□ -0.14
HDAC6-231ENST00000488905 SRMP19623 302 aa14.16□□□□□ -0.14
HDAC6-231ENST00000488905 ZBTB25P24278 435 aa14.16□□□□□ -0.14
HDAC6-231ENST00000488905 CD40LGP29965 261 aa14.16□□□□□ -0.14
HDAC6-231ENST00000488905 RCN1Q15293 331 aa14.16□□□□□ -0.14
HDAC6-231ENST00000488905 HAPLN4Q86UW8 402 aa14.16□□□□□ -0.14
HDAC6-231ENST00000488905 RHOVQ96L33 236 aa14.16□□□□□ -0.14
HDAC6-231ENST00000488905 LPAR5Q9H1C0 372 aa14.16□□□□□ -0.14
HDAC6-231ENST00000488905 MGAT4AQ9UM21 535 aa14.16□□□□□ -0.14
HDAC6-231ENST00000488905 ARPC1BO15143 372 aaKnown RBP14.15□□□□□ -0.14
HDAC6-231ENST00000488905 SOCS1O15524 211 aa14.15□□□□□ -0.14
HDAC6-231ENST00000488905 TRGV3P03979 118 aa14.15□□□□□ -0.14
HDAC6-231ENST00000488905 IGKV1-16P04430 117 aa14.15□□□□□ -0.14
HDAC6-231ENST00000488905 CDK1P06493 297 aa14.15□□□□□ -0.14
HDAC6-231ENST00000488905 UCHL1P09936 223 aa14.15□□□□□ -0.14
HDAC6-231ENST00000488905 CD37P11049 281 aa14.15□□□□□ -0.14
HDAC6-231ENST00000488905 CEACAM6P40199 344 aa14.15□□□□□ -0.14
HDAC6-231ENST00000488905 RNLSQ5VYX0 342 aa14.15□□□□□ -0.14
HDAC6-231ENST00000488905 CEACAM19Q7Z692 300 aa14.15□□□□□ -0.14
HDAC6-231ENST00000488905 DRAXINQ8NBI3 349 aaPredicted RBP14.15□□□□□ -0.14
HDAC6-231ENST00000488905 PTX4Q96A99 478 aa14.15□□□□□ -0.14
HDAC6-231ENST00000488905 TSNAXQ99598 290 aaKnown RBP14.15□□□□□ -0.14
HDAC6-231ENST00000488905 URM1Q9BTM9 101 aaKnown RBP14.15□□□□□ -0.14
HDAC6-231ENST00000488905 C12orf4Q9NQ89 552 aa14.15□□□□□ -0.14
HDAC6-231ENST00000488905 STUB1Q9UNE7 303 aa14.15□□□□□ -0.14
HDAC6-231ENST00000488905 LSM2Q9Y333 95 aaKnown RBP14.15□□□□□ -0.14
HDAC6-231ENST00000488905 PROP1O75360 226 aa14.14□□□□□ -0.15
HDAC6-231ENST00000488905 LYL1P12980 280 aa14.14□□□□□ -0.15
HDAC6-231ENST00000488905 OGFRL1Q5TC84 451 aaPredicted RBP14.14□□□□□ -0.15
HDAC6-231ENST00000488905 PDPNQ86YL7 162 aa14.14□□□□□ -0.15
HDAC6-231ENST00000488905 ZNF383Q8NA42 475 aa14.14□□□□□ -0.15
HDAC6-231ENST00000488905 GRPEL2Q8TAA5 225 aa14.14□□□□□ -0.15
HDAC6-231ENST00000488905 RSRP1Q9BUV0 290 aa14.14□□□□□ -0.15
HDAC6-231ENST00000488905 ELOVL1Q9BW60 279 aa14.14□□□□□ -0.15
HDAC6-231ENST00000488905 Q9N2K0 584 aa14.14□□□□□ -0.15
HDAC6-231ENST00000488905 EPPK1P58107 5090 aaKnown RBP14.14□□□□□ -0.15
HDAC6-231ENST00000488905 FOXI3A8MTJ6 420 aaPredicted RBP14.13□□□□□ -0.15
HDAC6-231ENST00000488905 SLC25A17O43808 307 aa14.13□□□□□ -0.15
HDAC6-231ENST00000488905 IGLV1-51P01701 117 aa14.13□□□□□ -0.15
HDAC6-231ENST00000488905 APOA2P02652 100 aa14.13□□□□□ -0.15
HDAC6-231ENST00000488905 SCTP09683 121 aa14.13□□□□□ -0.15
HDAC6-231ENST00000488905 IGHV4-30-4P0DP06 118 aa14.13□□□□□ -0.15
HDAC6-231ENST00000488905 RPS16P62249 146 aaKnown RBP14.13□□□□□ -0.15
HDAC6-231ENST00000488905 P2RY14Q15391 338 aa14.13□□□□□ -0.15
HDAC6-231ENST00000488905 SPHARQ15513 63 aa14.13□□□□□ -0.15
HDAC6-231ENST00000488905 FAM89BQ8N5H3 189 aa14.13□□□□□ -0.15
HDAC6-231ENST00000488905 POC5Q8NA72 575 aa14.13□□□□□ -0.15
HDAC6-231ENST00000488905 CITED4Q96RK1 184 aa14.13□□□□□ -0.15
HDAC6-231ENST00000488905 TM2D3Q9BRN9 247 aa14.13□□□□□ -0.15
HDAC6-231ENST00000488905 PALMDQ9NP74 551 aa14.13□□□□□ -0.15
HDAC6-231ENST00000488905 ZNF221Q9UK13 617 aa14.13□□□□□ -0.15
HDAC6-231ENST00000488905 HSF4Q9ULV5 492 aa14.13□□□□□ -0.15
HDAC6-231ENST00000488905 H3BUA1 57 aa14.12□□□□□ -0.15
HDAC6-231ENST00000488905 SLC17A2O00624 439 aa14.12□□□□□ -0.15
HDAC6-231ENST00000488905 ARSBP15848 533 aa14.12□□□□□ -0.15
HDAC6-231ENST00000488905 LINC00205P59089 165 aa14.12□□□□□ -0.15
HDAC6-231ENST00000488905 FXYD3Q14802 87 aa14.12□□□□□ -0.15
HDAC6-231ENST00000488905 MED22Q15528 200 aa14.12□□□□□ -0.15
HDAC6-231ENST00000488905 UFD1Q92890 307 aa14.12□□□□□ -0.15
HDAC6-231ENST00000488905 GFI1Q99684 422 aa14.12□□□□□ -0.15
HDAC6-231ENST00000488905 PLGRKTQ9HBL7 147 aa14.12□□□□□ -0.15
HDAC6-231ENST00000488905 ZNF355PQ9NSJ1 428 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms