RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 CYYR1Q96J86 154 aa14.57□□□□□ -0.08
GGPS1-206ENST00000488594 CLCC1Q96S66 551 aa14.57□□□□□ -0.08
GGPS1-206ENST00000488594 TSNAXQ99598 290 aaKnown RBP14.57□□□□□ -0.08
GGPS1-206ENST00000488594 MAPK3P27361 379 aaPredicted RBP14.56□□□□□ -0.08
GGPS1-206ENST00000488594 KLF5Q13887 457 aaPredicted RBP14.56□□□□□ -0.08
GGPS1-206ENST00000488594 MOB1BQ7L9L4 216 aa14.56□□□□□ -0.08
GGPS1-206ENST00000488594 POC5Q8NA72 575 aa14.56□□□□□ -0.08
GGPS1-206ENST00000488594 EDARADDQ8WWZ3 215 aa14.56□□□□□ -0.08
GGPS1-206ENST00000488594 AGMATQ9BSE5 352 aa14.56□□□□□ -0.08
GGPS1-206ENST00000488594 FAAP24Q9BTP7 215 aa14.56□□□□□ -0.08
GGPS1-206ENST00000488594 TUBA4BQ9H853 241 aa14.56□□□□□ -0.08
GGPS1-206ENST00000488594 ZNF355PQ9NSJ1 428 aa14.56□□□□□ -0.08
GGPS1-206ENST00000488594 NAPSAO96009 420 aa14.55□□□□□ -0.08
GGPS1-206ENST00000488594 CPEP16870 476 aa14.55□□□□□ -0.08
GGPS1-206ENST00000488594 FXYD3Q14802 87 aa14.55□□□□□ -0.08
GGPS1-206ENST00000488594 ABHD14BQ96IU4 210 aa14.55□□□□□ -0.08
GGPS1-206ENST00000488594 CHMP1AQ9HD42 196 aaPredicted RBP14.55□□□□□ -0.08
GGPS1-206ENST00000488594 CSMD3Q7Z407 3707 aa14.55□□□□□ -0.08
GGPS1-206ENST00000488594 LYSTQ99698 3801 aa14.55□□□□□ -0.08
GGPS1-206ENST00000488594 CD1AP06126 327 aa14.54□□□□□ -0.08
GGPS1-206ENST00000488594 LCN12Q6JVE5 192 aa14.54□□□□□ -0.08
GGPS1-206ENST00000488594 ZNF880Q6PDB4 577 aa14.54□□□□□ -0.08
GGPS1-206ENST00000488594 C6orf201Q7Z4U5 140 aa14.54□□□□□ -0.08
GGPS1-206ENST00000488594 GRPEL2Q8TAA5 225 aa14.54□□□□□ -0.08
GGPS1-206ENST00000488594 RIMS4Q9H426 269 aaPredicted RBP14.54□□□□□ -0.08
GGPS1-206ENST00000488594 SMPD3Q9NY59 655 aaPredicted RBP14.54□□□□□ -0.08
GGPS1-206ENST00000488594 SIGLEC8Q9NYZ4 499 aa14.54□□□□□ -0.08
GGPS1-206ENST00000488594 BRI3O95415 125 aa14.53□□□□□ -0.08
GGPS1-206ENST00000488594 ZBTB25P24278 435 aa14.53□□□□□ -0.08
GGPS1-206ENST00000488594 RPS27AP62979 156 aaKnown RBP14.53□□□□□ -0.08
GGPS1-206ENST00000488594 TATDN3Q17R31 274 aa14.53□□□□□ -0.08
GGPS1-206ENST00000488594 IL34Q6ZMJ4 242 aa14.53□□□□□ -0.08
GGPS1-206ENST00000488594 PDPNQ86YL7 162 aa14.53□□□□□ -0.08
GGPS1-206ENST00000488594 Q8N402 240 aa14.53□□□□□ -0.08
GGPS1-206ENST00000488594 TMEM68Q96MH6 324 aa14.53□□□□□ -0.08
GGPS1-206ENST00000488594 THAP7Q9BT49 309 aaPredicted RBP14.53□□□□□ -0.08
GGPS1-206ENST00000488594 TMED9Q9BVK6 235 aa14.53□□□□□ -0.08
GGPS1-206ENST00000488594 TMEM59Q9BXS4 323 aa14.53□□□□□ -0.08
GGPS1-206ENST00000488594 STARD9Q9P2P6 4700 aa14.53□□□□□ -0.08
GGPS1-206ENST00000488594 PNMA8CA0A1B0GUJ8 204 aa14.52□□□□□ -0.08
GGPS1-206ENST00000488594 IGKV1-16P04430 117 aa14.52□□□□□ -0.08
GGPS1-206ENST00000488594 AADACP22760 399 aa14.52□□□□□ -0.08
GGPS1-206ENST00000488594 RPS16P62249 146 aaKnown RBP14.52□□□□□ -0.08
GGPS1-206ENST00000488594 PQLC1Q8N2U9 271 aa14.52□□□□□ -0.08
GGPS1-206ENST00000488594 KCNG3Q8TAE7 436 aa14.52□□□□□ -0.08
GGPS1-206ENST00000488594 SETD6Q8TBK2 473 aa14.52□□□□□ -0.08
GGPS1-206ENST00000488594 TM2D1Q9BX74 207 aa14.52□□□□□ -0.08
GGPS1-206ENST00000488594 PARP12Q9H0J9 701 aaKnown RBP14.52□□□□□ -0.08
GGPS1-206ENST00000488594 C11orf54Q9H0W9 315 aaPredicted RBP14.52□□□□□ -0.08
GGPS1-206ENST00000488594 FAM53CQ9NYF3 392 aa14.52□□□□□ -0.08
GGPS1-206ENST00000488594 MGAT4AQ9UM21 535 aa14.52□□□□□ -0.08
GGPS1-206ENST00000488594 TRBV6-6A0A0A6YYG2 114 aa14.51□□□□□ -0.09
GGPS1-206ENST00000488594 ANKRD34BA5PLL1 514 aa14.51□□□□□ -0.09
GGPS1-206ENST00000488594 DYNC1I1O14576 645 aa14.51□□□□□ -0.09
GGPS1-206ENST00000488594 CNIH1O95406 144 aa14.51□□□□□ -0.09
GGPS1-206ENST00000488594 APOA2P02652 100 aa14.51□□□□□ -0.09
GGPS1-206ENST00000488594 CELP19835 753 aa14.51□□□□□ -0.09
GGPS1-206ENST00000488594 HTR2CP28335 458 aa14.51□□□□□ -0.09
GGPS1-206ENST00000488594 CEACAM6P40199 344 aa14.51□□□□□ -0.09
GGPS1-206ENST00000488594 SYNJ2BPP57105 145 aa14.51□□□□□ -0.09
GGPS1-206ENST00000488594 DRAXINQ8NBI3 349 aaPredicted RBP14.51□□□□□ -0.09
GGPS1-206ENST00000488594 OR5T1Q8NG75 326 aa14.51□□□□□ -0.09
GGPS1-206ENST00000488594 PTX4Q96A99 478 aa14.51□□□□□ -0.09
GGPS1-206ENST00000488594 PLEKHJ1Q9NW61 149 aa14.51□□□□□ -0.09
GGPS1-206ENST00000488594 PEF1Q9UBV8 284 aaKnown RBP14.51□□□□□ -0.09
GGPS1-206ENST00000488594 ZNF221Q9UK13 617 aa14.51□□□□□ -0.09
GGPS1-206ENST00000488594 EFCAB10A6NFE3 127 aa14.5□□□□□ -0.09
GGPS1-206ENST00000488594 SLC25A17O43808 307 aa14.5□□□□□ -0.09
GGPS1-206ENST00000488594 ST3GAL4Q11206 333 aa14.5□□□□□ -0.09
GGPS1-206ENST00000488594 GLT8D1Q68CQ7 371 aa14.5□□□□□ -0.09
GGPS1-206ENST00000488594 OR10K2Q6IF99 312 aa14.5□□□□□ -0.09
GGPS1-206ENST00000488594 ZNF383Q8NA42 475 aa14.5□□□□□ -0.09
GGPS1-206ENST00000488594 S100A14Q9HCY8 104 aa14.5□□□□□ -0.09
GGPS1-206ENST00000488594 SHISA3A0PJX4 238 aa14.49□□□□□ -0.09
GGPS1-206ENST00000488594 PROP1O75360 226 aa14.49□□□□□ -0.09
GGPS1-206ENST00000488594 OR2A4O95047 310 aa14.49□□□□□ -0.09
GGPS1-206ENST00000488594 TTC23Q5W5X9 447 aa14.49□□□□□ -0.09
GGPS1-206ENST00000488594 ZNF343Q6P1L6 599 aa14.49□□□□□ -0.09
GGPS1-206ENST00000488594 SETD9Q8NE22 299 aa14.49□□□□□ -0.09
GGPS1-206ENST00000488594 OR2K2Q8NGT1 345 aa14.49□□□□□ -0.09
GGPS1-206ENST00000488594 USMG5Q96IX5 58 aa14.49□□□□□ -0.09
GGPS1-206ENST00000488594 TINAGL1Q9GZM7 467 aaPredicted RBP14.49□□□□□ -0.09
GGPS1-206ENST00000488594 OR1A1Q9P1Q5 309 aa14.49□□□□□ -0.09
GGPS1-206ENST00000488594 CEPT1Q9Y6K0 416 aa14.49□□□□□ -0.09
GGPS1-206ENST00000488594 CSN3P07498 182 aa14.48□□□□□ -0.09
GGPS1-206ENST00000488594 LGALS7P47929 136 aa14.48□□□□□ -0.09
GGPS1-206ENST00000488594 WNT4P56705 351 aa14.48□□□□□ -0.09
GGPS1-206ENST00000488594 HLA-DRB3P79483 266 aa14.48□□□□□ -0.09
GGPS1-206ENST00000488594 RPEL1Q2QD12 228 aa14.48□□□□□ -0.09
GGPS1-206ENST00000488594 C1orf100Q5SVJ3 147 aa14.48□□□□□ -0.09
GGPS1-206ENST00000488594 PHYHIPQ92561 330 aa14.48□□□□□ -0.09
GGPS1-206ENST00000488594 GGHQ92820 318 aa14.48□□□□□ -0.09
GGPS1-206ENST00000488594 NICN1Q9BSH3 213 aa14.48□□□□□ -0.09
GGPS1-206ENST00000488594 HIPK2Q9H2X6 1198 aa14.48□□□□□ -0.09
GGPS1-206ENST00000488594 PEMTQ9UBM1 199 aa14.48□□□□□ -0.09
GGPS1-206ENST00000488594 TNCP24821 2201 aa14.48□□□□□ -0.09
GGPS1-206ENST00000488594 MYL12BO14950 172 aa14.47□□□□□ -0.09
GGPS1-206ENST00000488594 SNRPBP14678 240 aaKnown RBP14.47□□□□□ -0.09
GGPS1-206ENST00000488594 SSBP2P81877 361 aaPredicted RBP14.47□□□□□ -0.09
GGPS1-206ENST00000488594 UNC119Q13432 240 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms