RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-215ENST00000487563 OR1N2Q8NGR9 330 aa18.37■□□□□ 0.53
PLOD3-215ENST00000487563 ZNF221Q9UK13 617 aa18.37■□□□□ 0.53
PLOD3-215ENST00000487563 FOXI3A8MTJ6 420 aaPredicted RBP18.36■□□□□ 0.53
PLOD3-215ENST00000487563 DENRO43583 198 aaKnown RBP18.36■□□□□ 0.53
PLOD3-215ENST00000487563 HSPA13P48723 471 aa18.36■□□□□ 0.53
PLOD3-215ENST00000487563 RAB9AP51151 201 aa18.36■□□□□ 0.53
PLOD3-215ENST00000487563 TMEM50BP56557 158 aa18.36■□□□□ 0.53
PLOD3-215ENST00000487563 NDPQ00604 133 aa18.36■□□□□ 0.53
PLOD3-215ENST00000487563 C2orf76Q3KRA6 126 aa18.36■□□□□ 0.53
PLOD3-215ENST00000487563 ZNF260Q3ZCT1 412 aa18.36■□□□□ 0.53
PLOD3-215ENST00000487563 HES5Q5TA89 166 aa18.36■□□□□ 0.53
PLOD3-215ENST00000487563 IZUMO2Q6UXV1 221 aa18.36■□□□□ 0.53
PLOD3-215ENST00000487563 CNBD2Q96M20 576 aa18.36■□□□□ 0.53
PLOD3-215ENST00000487563 PRR25Q96S07 402 aa18.36■□□□□ 0.53
PLOD3-215ENST00000487563 AGMATQ9BSE5 352 aa18.36■□□□□ 0.53
PLOD3-215ENST00000487563 BLOC1S6Q9UL45 172 aa18.36■□□□□ 0.53
PLOD3-215ENST00000487563 RNF150Q9ULK6 438 aa18.36■□□□□ 0.53
PLOD3-215ENST00000487563 FOXA2Q9Y261 457 aaPredicted RBP18.36■□□□□ 0.53
PLOD3-215ENST00000487563 I3L521 148 aa18.35■□□□□ 0.53
PLOD3-215ENST00000487563 CX3CL1P78423 397 aa18.35■□□□□ 0.53
PLOD3-215ENST00000487563 RUNX1Q01196 453 aa18.35■□□□□ 0.53
PLOD3-215ENST00000487563 ZNF367Q7RTV3 350 aa18.35■□□□□ 0.53
PLOD3-215ENST00000487563 MINDY2Q8NBR6 621 aa18.35■□□□□ 0.53
PLOD3-215ENST00000487563 OR5AN1Q8NGI8 311 aa18.35■□□□□ 0.53
PLOD3-215ENST00000487563 FBXO7Q9Y3I1 522 aa18.35■□□□□ 0.53
PLOD3-215ENST00000487563 TRDCB7Z8K6 153 aa18.34■□□□□ 0.53
PLOD3-215ENST00000487563 PDCD5O14737 125 aa18.34■□□□□ 0.53
PLOD3-215ENST00000487563 CD3GP09693 182 aa18.34■□□□□ 0.53
PLOD3-215ENST00000487563 GNB1P62873 340 aa18.34■□□□□ 0.53
PLOD3-215ENST00000487563 TMEM267Q0VDI3 215 aaPredicted RBP18.34■□□□□ 0.53
PLOD3-215ENST00000487563 KIAA0141Q14154 515 aaPredicted RBP18.34■□□□□ 0.53
PLOD3-215ENST00000487563 TBCEQ15813 527 aaPredicted RBP18.34■□□□□ 0.53
PLOD3-215ENST00000487563 TCTEX1D1Q8N7M0 179 aa18.34■□□□□ 0.53
PLOD3-215ENST00000487563 DRAXINQ8NBI3 349 aaPredicted RBP18.34■□□□□ 0.53
PLOD3-215ENST00000487563 CLCC1Q96S66 551 aa18.34■□□□□ 0.53
PLOD3-215ENST00000487563 METTL1Q9UBP6 276 aaKnown RBP18.34■□□□□ 0.53
PLOD3-215ENST00000487563 RAB22AQ9UL26 194 aa18.34■□□□□ 0.53
PLOD3-215ENST00000487563 TMEM272A0A1B0GTI8 110 aa18.33■□□□□ 0.52
PLOD3-215ENST00000487563 APOA2P02652 100 aa18.33■□□□□ 0.52
PLOD3-215ENST00000487563 PLAC9Q5JTB6 97 aa18.33■□□□□ 0.52
PLOD3-215ENST00000487563 PTX4Q96A99 478 aa18.33■□□□□ 0.52
PLOD3-215ENST00000487563 RAB3CQ96E17 227 aa18.33■□□□□ 0.52
PLOD3-215ENST00000487563 TSNAXQ99598 290 aaKnown RBP18.33■□□□□ 0.52
PLOD3-215ENST00000487563 RNF5Q99942 180 aa18.33■□□□□ 0.52
PLOD3-215ENST00000487563 RDH8Q9NYR8 311 aa18.33■□□□□ 0.52
PLOD3-215ENST00000487563 DNAH9Q9NYC9 4486 aa18.33■□□□□ 0.52
PLOD3-215ENST00000487563 FCN1O00602 326 aa18.32■□□□□ 0.52
PLOD3-215ENST00000487563 TFAP2AP05549 437 aa18.32■□□□□ 0.52
PLOD3-215ENST00000487563 MYL9P24844 172 aa18.32■□□□□ 0.52
PLOD3-215ENST00000487563 CRIP2P52943 208 aaPredicted RBP18.32■□□□□ 0.52
PLOD3-215ENST00000487563 RPS16P62249 146 aaKnown RBP18.32■□□□□ 0.52
PLOD3-215ENST00000487563 ASPHD1Q5U4P2 390 aa18.32■□□□□ 0.52
PLOD3-215ENST00000487563 PPP1R27Q86WC6 154 aa18.32■□□□□ 0.52
PLOD3-215ENST00000487563 CASTOR1Q8WTX7 329 aa18.32■□□□□ 0.52
PLOD3-215ENST00000487563 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.32■□□□□ 0.52
PLOD3-215ENST00000487563 SCOCQ9UIL1 159 aa18.32■□□□□ 0.52
PLOD3-215ENST00000487563 IGKV1-6A0A0C4DH72 117 aa18.31■□□□□ 0.52
PLOD3-215ENST00000487563 M0R1X1 148 aa18.31■□□□□ 0.52
PLOD3-215ENST00000487563 LDLRAD4O15165 306 aa18.31■□□□□ 0.52
PLOD3-215ENST00000487563 LY86O95711 162 aa18.31■□□□□ 0.52
PLOD3-215ENST00000487563 GADD45AP24522 165 aa18.31■□□□□ 0.52
PLOD3-215ENST00000487563 SERPINB10P48595 397 aa18.31■□□□□ 0.52
PLOD3-215ENST00000487563 INSL3P51460 131 aa18.31■□□□□ 0.52
PLOD3-215ENST00000487563 PSG5Q15238 335 aa18.31■□□□□ 0.52
PLOD3-215ENST00000487563 C19orf54Q5BKX5 351 aa18.31■□□□□ 0.52
PLOD3-215ENST00000487563 PYHIN1Q6K0P9 492 aa18.31■□□□□ 0.52
PLOD3-215ENST00000487563 UNQ5815/PRO19632Q6UWF5 114 aa18.31■□□□□ 0.52
PLOD3-215ENST00000487563 PDPNQ86YL7 162 aa18.31■□□□□ 0.52
PLOD3-215ENST00000487563 OR4A4PQ8NGN8 299 aa18.31■□□□□ 0.52
PLOD3-215ENST00000487563 FAM103A1Q9BTL3 118 aaKnown RBP18.31■□□□□ 0.52
PLOD3-215ENST00000487563 ZNF256Q9Y2P7 627 aaPredicted RBP18.31■□□□□ 0.52
PLOD3-215ENST00000487563 BET1O15155 118 aa18.3■□□□□ 0.52
PLOD3-215ENST00000487563 FABP7O15540 132 aa18.3■□□□□ 0.52
PLOD3-215ENST00000487563 SOX15O60248 233 aa18.3■□□□□ 0.52
PLOD3-215ENST00000487563 SPDEFO95238 335 aa18.3■□□□□ 0.52
PLOD3-215ENST00000487563 CA2P00918 260 aa18.3■□□□□ 0.52
PLOD3-215ENST00000487563 CD40LGP29965 261 aa18.3■□□□□ 0.52
PLOD3-215ENST00000487563 PLA2G7Q13093 441 aa18.3■□□□□ 0.52
PLOD3-215ENST00000487563 SSX1Q16384 188 aa18.3■□□□□ 0.52
PLOD3-215ENST00000487563 ACTBL2Q562R1 376 aa18.3■□□□□ 0.52
PLOD3-215ENST00000487563 ZNF383Q8NA42 475 aa18.3■□□□□ 0.52
PLOD3-215ENST00000487563 ALX4Q9H161 411 aaPredicted RBP18.3■□□□□ 0.52
PLOD3-215ENST00000487563 GAB2Q9UQC2 676 aa18.3■□□□□ 0.52
PLOD3-215ENST00000487563 NUBP2Q9Y5Y2 271 aa18.3■□□□□ 0.52
PLOD3-215ENST00000487563 A0A075B6Q4 140 aa18.29■□□□□ 0.52
PLOD3-215ENST00000487563 TRAV1-2A0A0B4J238 106 aa18.29■□□□□ 0.52
PLOD3-215ENST00000487563 ERICH4A6NGS2 130 aa18.29■□□□□ 0.52
PLOD3-215ENST00000487563 OVOL1O14753 267 aa18.29■□□□□ 0.52
PLOD3-215ENST00000487563 IGKV1-16P04430 117 aa18.29■□□□□ 0.52
PLOD3-215ENST00000487563 OR10A3P58181 314 aa18.29■□□□□ 0.52
PLOD3-215ENST00000487563 CD200R1LQ6Q8B3 271 aa18.29■□□□□ 0.52
PLOD3-215ENST00000487563 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.29■□□□□ 0.52
PLOD3-215ENST00000487563 DCUN1D4Q92564 292 aa18.29■□□□□ 0.52
PLOD3-215ENST00000487563 SLC35D1Q9NTN3 355 aa18.29■□□□□ 0.52
PLOD3-215ENST00000487563 COL7A1Q02388 2944 aa18.29■□□□□ 0.52
PLOD3-215ENST00000487563 LINC01619G3V211 115 aa18.28■□□□□ 0.52
PLOD3-215ENST00000487563 PROP1O75360 226 aa18.28■□□□□ 0.52
PLOD3-215ENST00000487563 FCGR3AP08637 254 aa18.28■□□□□ 0.52
PLOD3-215ENST00000487563 LGALS1P09382 135 aaKnown RBP18.28■□□□□ 0.52
PLOD3-215ENST00000487563 EGR2P11161 476 aaPredicted RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms