RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 NCBP2LA6PVI3 153 aaKnown RBP11.69□□□□□ -0.54
LIMS3-205ENST00000487150 OR8U9P0C7N5 309 aa11.69□□□□□ -0.54
LIMS3-205ENST00000487150 OR3A3P47888 321 aa11.69□□□□□ -0.54
LIMS3-205ENST00000487150 PROK1P58294 105 aa11.69□□□□□ -0.54
LIMS3-205ENST00000487150 MSMO1Q15800 293 aa11.69□□□□□ -0.54
LIMS3-205ENST00000487150 ACTBL2Q562R1 376 aa11.69□□□□□ -0.54
LIMS3-205ENST00000487150 PDPNQ86YL7 162 aa11.69□□□□□ -0.54
LIMS3-205ENST00000487150 Q8N6K4 173 aa11.69□□□□□ -0.54
LIMS3-205ENST00000487150 C5orf56Q8N8D9 126 aa11.69□□□□□ -0.54
LIMS3-205ENST00000487150 OR5AP2Q8NGF4 316 aa11.69□□□□□ -0.54
LIMS3-205ENST00000487150 OR5AN1Q8NGI8 311 aa11.69□□□□□ -0.54
LIMS3-205ENST00000487150 OR8U1Q8NH10 309 aa11.69□□□□□ -0.54
LIMS3-205ENST00000487150 ABHD14BQ96IU4 210 aa11.69□□□□□ -0.54
LIMS3-205ENST00000487150 RNF5Q99942 180 aa11.69□□□□□ -0.54
LIMS3-205ENST00000487150 ZNF251Q9BRH9 671 aa11.69□□□□□ -0.54
LIMS3-205ENST00000487150 PARP12Q9H0J9 701 aaKnown RBP11.69□□□□□ -0.54
LIMS3-205ENST00000487150 LIN7CQ9NUP9 197 aaKnown RBP11.69□□□□□ -0.54
LIMS3-205ENST00000487150 KIAA1456Q9P272 454 aa11.69□□□□□ -0.54
LIMS3-205ENST00000487150 ANAPC10Q9UM13 185 aa11.69□□□□□ -0.54
LIMS3-205ENST00000487150 IGKV1D-8A0A087WSZ0 117 aa11.68□□□□□ -0.54
LIMS3-205ENST00000487150 M0R1X1 148 aa11.68□□□□□ -0.54
LIMS3-205ENST00000487150 KCNAB3O43448 404 aa11.68□□□□□ -0.54
LIMS3-205ENST00000487150 OR5H8P0DN80 308 aa11.68□□□□□ -0.54
LIMS3-205ENST00000487150 RRASP10301 218 aa11.68□□□□□ -0.54
LIMS3-205ENST00000487150 TBPP20226 339 aa11.68□□□□□ -0.54
LIMS3-205ENST00000487150 THBS3P49746 956 aa11.68□□□□□ -0.54
LIMS3-205ENST00000487150 HNF4GQ14541 408 aa11.68□□□□□ -0.54
LIMS3-205ENST00000487150 CDK10Q15131 360 aa11.68□□□□□ -0.54
LIMS3-205ENST00000487150 MMDQ15546 238 aa11.68□□□□□ -0.54
LIMS3-205ENST00000487150 RTL8BQ17RB0 113 aa11.68□□□□□ -0.54
LIMS3-205ENST00000487150 ABCA11PQ4W5N1 156 aa11.68□□□□□ -0.54
LIMS3-205ENST00000487150 RPL39P5Q59GN2 51 aa11.68□□□□□ -0.54
LIMS3-205ENST00000487150 C5orf24Q7Z6I8 188 aa11.68□□□□□ -0.54
LIMS3-205ENST00000487150 SNX29P2Q8IUI4 249 aa11.68□□□□□ -0.54
LIMS3-205ENST00000487150 ZNF645Q8N7E2 425 aa11.68□□□□□ -0.54
LIMS3-205ENST00000487150 GVQW1Q8N7I0 195 aa11.68□□□□□ -0.54
LIMS3-205ENST00000487150 OR5H2Q8NGV7 314 aa11.68□□□□□ -0.54
LIMS3-205ENST00000487150 GPX8Q8TED1 209 aa11.68□□□□□ -0.54
LIMS3-205ENST00000487150 RASL11BQ9BPW5 248 aa11.68□□□□□ -0.54
LIMS3-205ENST00000487150 C6orf62Q9GZU0 229 aaPredicted RBP11.68□□□□□ -0.54
LIMS3-205ENST00000487150 H0YJW9 148 aa11.67□□□□□ -0.54
LIMS3-205ENST00000487150 H7C2Y5 167 aa11.67□□□□□ -0.54
LIMS3-205ENST00000487150 TUSC2O75896 110 aa11.67□□□□□ -0.54
LIMS3-205ENST00000487150 SPDEFO95238 335 aa11.67□□□□□ -0.54
LIMS3-205ENST00000487150 HLA-DQB1P01920 261 aa11.67□□□□□ -0.54
LIMS3-205ENST00000487150 NAT1P18440 290 aa11.67□□□□□ -0.54
LIMS3-205ENST00000487150 HERV-K104P61576 105 aa11.67□□□□□ -0.54
LIMS3-205ENST00000487150 FAM131AQ6UXB0 335 aa11.67□□□□□ -0.54
LIMS3-205ENST00000487150 FOXRED2Q8IWF2 684 aa11.67□□□□□ -0.54
LIMS3-205ENST00000487150 LAX1Q8IWV1 398 aa11.67□□□□□ -0.54
LIMS3-205ENST00000487150 MCFD2Q8NI22 146 aa11.67□□□□□ -0.54
LIMS3-205ENST00000487150 SNAPC3Q92966 411 aa11.67□□□□□ -0.54
LIMS3-205ENST00000487150 SLIRPQ9GZT3 109 aaKnown RBP11.67□□□□□ -0.54
LIMS3-205ENST00000487150 RBM38Q9H0Z9 239 aaKnown RBP11.67□□□□□ -0.54
LIMS3-205ENST00000487150 RNF150Q9ULK6 438 aa11.67□□□□□ -0.54
LIMS3-205ENST00000487150 A3GALT2U3KPV4 340 aa11.67□□□□□ -0.54
LIMS3-205ENST00000487150 NBR2O15453 112 aa11.66□□□□□ -0.54
LIMS3-205ENST00000487150 CT45A6P0DMU7 189 aa11.66□□□□□ -0.54
LIMS3-205ENST00000487150 CT45A5P0DMU8 189 aa11.66□□□□□ -0.54
LIMS3-205ENST00000487150 CT45A7P0DMV0 189 aa11.66□□□□□ -0.54
LIMS3-205ENST00000487150 NFYAP23511 347 aaPredicted RBP11.66□□□□□ -0.54
LIMS3-205ENST00000487150 SSBP1Q04837 148 aaKnown RBP11.66□□□□□ -0.54
LIMS3-205ENST00000487150 PYHIN1Q6K0P9 492 aa11.66□□□□□ -0.54
LIMS3-205ENST00000487150 KLHDC1Q8N7A1 406 aa11.66□□□□□ -0.54
LIMS3-205ENST00000487150 ZBTB34Q8NCN2 500 aa11.66□□□□□ -0.54
LIMS3-205ENST00000487150 SGMS2Q8NHU3 365 aa11.66□□□□□ -0.54
LIMS3-205ENST00000487150 GIMAP1Q8WWP7 306 aa11.66□□□□□ -0.54
LIMS3-205ENST00000487150 TSNAXQ99598 290 aaKnown RBP11.66□□□□□ -0.54
LIMS3-205ENST00000487150 HSD17B10Q99714 261 aaKnown RBP11.66□□□□□ -0.54
LIMS3-205ENST00000487150 GON7Q9BXV9 100 aa11.66□□□□□ -0.54
LIMS3-205ENST00000487150 SDHAF2Q9NX18 166 aa11.66□□□□□ -0.54
LIMS3-205ENST00000487150 EHFQ9NZC4 300 aa11.66□□□□□ -0.54
LIMS3-205ENST00000487150 ZNF107Q9UII5 783 aaPredicted RBP11.66□□□□□ -0.54
LIMS3-205ENST00000487150 PRELID3BQ9Y3B1 194 aa11.66□□□□□ -0.54
LIMS3-205ENST00000487150 PPYP01298 95 aa11.65□□□□□ -0.54
LIMS3-205ENST00000487150 PTHLHP12272 177 aa11.65□□□□□ -0.54
LIMS3-205ENST00000487150 FCGR2CP31995 323 aa11.65□□□□□ -0.54
LIMS3-205ENST00000487150 S100A5P33763 92 aa11.65□□□□□ -0.54
LIMS3-205ENST00000487150 BLCAPP62952 87 aa11.65□□□□□ -0.54
LIMS3-205ENST00000487150 DYRK1AQ13627 763 aa11.65□□□□□ -0.54
LIMS3-205ENST00000487150 C9orf152Q5JTZ5 239 aa11.65□□□□□ -0.54
LIMS3-205ENST00000487150 SLC35E3Q7Z769 313 aa11.65□□□□□ -0.54
LIMS3-205ENST00000487150 Q8N9W7 124 aa11.65□□□□□ -0.54
LIMS3-205ENST00000487150 FCAMRQ8WWV6 532 aa11.65□□□□□ -0.54
LIMS3-205ENST00000487150 TAF15Q92804 592 aaKnown RBP eCLIP11.65□□□□□ -0.54
LIMS3-205ENST00000487150 DIRAS2Q96HU8 199 aa11.65□□□□□ -0.54
LIMS3-205ENST00000487150 CITED1Q99966 193 aa11.65□□□□□ -0.54
LIMS3-205ENST00000487150 MMP27Q9H306 513 aa11.65□□□□□ -0.54
LIMS3-205ENST00000487150 SLC35D1Q9NTN3 355 aa11.65□□□□□ -0.54
LIMS3-205ENST00000487150 SERTAD4Q9NUC0 356 aa11.65□□□□□ -0.54
LIMS3-205ENST00000487150 DNHD1Q96M86 4753 aa11.65□□□□□ -0.54
LIMS3-205ENST00000487150 MEIS3P1A6NDR6 274 aa11.64□□□□□ -0.55
LIMS3-205ENST00000487150 ZNF736B4DX44 427 aaPredicted RBP11.64□□□□□ -0.55
LIMS3-205ENST00000487150 GABARAPH6UMI1 98 aa11.64□□□□□ -0.55
LIMS3-205ENST00000487150 AP4M1O00189 453 aa11.64□□□□□ -0.55
LIMS3-205ENST00000487150 CTDSPLO15194 276 aa11.64□□□□□ -0.55
LIMS3-205ENST00000487150 AMY1AP04745 511 aa11.64□□□□□ -0.55
LIMS3-205ENST00000487150 AMY2AP04746 511 aa11.64□□□□□ -0.55
LIMS3-205ENST00000487150 VSIG10L2P0DP72 767 aa11.64□□□□□ -0.55
LIMS3-205ENST00000487150 S100GP29377 79 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 156.7 ms