RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 ASF1BQ9NVP2 202 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 TMEM38BQ9NVV0 291 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 NDUFB11Q9NX14 153 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 ENPP5Q9UJA9 477 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 GNG8Q9UK08 70 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 VSIG4Q9Y279 399 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 FAM215AQ9Y5M1 114 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 LHFPL6Q9Y693 200 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 LOC400499M0QZD8 3231 aa2.92□□□□□ -1.94
PTCD3-216ENST00000487043 ARPC4-TTLL3A0A0A6YYG9 625 aa2.91□□□□□ -1.94
PTCD3-216ENST00000487043 A0A0J9YXY3 114 aa2.91□□□□□ -1.94
PTCD3-216ENST00000487043 TRDV1A0A1B0GX56 115 aa2.91□□□□□ -1.94
PTCD3-216ENST00000487043 FUOMA2VDF0 154 aa2.91□□□□□ -1.94
PTCD3-216ENST00000487043 ZFP92A6NM28 416 aa2.91□□□□□ -1.94
PTCD3-216ENST00000487043 OR4C45A6NMZ5 311 aa2.91□□□□□ -1.94
PTCD3-216ENST00000487043 KRTAP9-6A8MVA2 160 aa2.91□□□□□ -1.94
PTCD3-216ENST00000487043 SLC22A1O15245 554 aa2.91□□□□□ -1.94
PTCD3-216ENST00000487043 RER1O15258 196 aa2.91□□□□□ -1.94
PTCD3-216ENST00000487043 SLC19A2O60779 497 aa2.91□□□□□ -1.94
PTCD3-216ENST00000487043 SRSF10O75494 262 aaKnown RBP2.91□□□□□ -1.94
PTCD3-216ENST00000487043 SC5DO75845 299 aa2.91□□□□□ -1.94
PTCD3-216ENST00000487043 TNFSF13O75888 250 aa2.91□□□□□ -1.94
PTCD3-216ENST00000487043 OR2F2O95006 317 aa2.91□□□□□ -1.94
PTCD3-216ENST00000487043 RPP14O95059 124 aaKnown RBP2.91□□□□□ -1.94
PTCD3-216ENST00000487043 FARS2O95363 451 aaKnown RBP2.91□□□□□ -1.94
PTCD3-216ENST00000487043 APOC1P02654 83 aa2.91□□□□□ -1.94
PTCD3-216ENST00000487043 HLA-DPB1P04440 258 aa2.91□□□□□ -1.94
PTCD3-216ENST00000487043 MMP7P09237 267 aaPredicted RBP2.91□□□□□ -1.94
PTCD3-216ENST00000487043 GADD45AP24522 165 aa2.91□□□□□ -1.94
PTCD3-216ENST00000487043 KRTAP5-9P26371 169 aa2.91□□□□□ -1.94
PTCD3-216ENST00000487043 BTCP35070 178 aa2.91□□□□□ -1.94
PTCD3-216ENST00000487043 UGT2B10P36537 528 aa2.91□□□□□ -1.94
PTCD3-216ENST00000487043 RBMXP38159 391 aaKnown RBP2.91□□□□□ -1.94
PTCD3-216ENST00000487043 RAB9AP51151 201 aa2.91□□□□□ -1.94
PTCD3-216ENST00000487043 DSCR10P59022 87 aa2.91□□□□□ -1.94
PTCD3-216ENST00000487043 PCBD1P61457 104 aa2.91□□□□□ -1.94
PTCD3-216ENST00000487043 RPS25P62851 125 aaKnown RBP2.91□□□□□ -1.94
PTCD3-216ENST00000487043 ECH1Q13011 328 aa2.91□□□□□ -1.94
PTCD3-216ENST00000487043 AQP6Q13520 282 aa2.91□□□□□ -1.94
PTCD3-216ENST00000487043 SPCS2Q15005 226 aa2.91□□□□□ -1.94
PTCD3-216ENST00000487043 CDK5R1Q15078 307 aa2.91□□□□□ -1.94
PTCD3-216ENST00000487043 TRAM1Q15629 374 aa2.91□□□□□ -1.94
PTCD3-216ENST00000487043 RGS21Q2M5E4 152 aa2.91□□□□□ -1.94
PTCD3-216ENST00000487043 RSPO1Q2MKA7 263 aaPredicted RBP2.91□□□□□ -1.94
PTCD3-216ENST00000487043 SLC36A2Q495M3 483 aa2.91□□□□□ -1.94
PTCD3-216ENST00000487043 ZNF544Q6NX49 715 aa2.91□□□□□ -1.94
PTCD3-216ENST00000487043 C16orf87Q6PH81 154 aa2.91□□□□□ -1.94
PTCD3-216ENST00000487043 CNIH2Q6PI25 160 aa2.91□□□□□ -1.94
PTCD3-216ENST00000487043 ARL9Q6T311 187 aa2.91□□□□□ -1.94
PTCD3-216ENST00000487043 Q6ZSR3 168 aa2.91□□□□□ -1.94
PTCD3-216ENST00000487043 Q6ZT83 130 aa2.91□□□□□ -1.94
PTCD3-216ENST00000487043 SSX9Q7RTT3 188 aa2.91□□□□□ -1.94
PTCD3-216ENST00000487043 SLC16A14Q7RTX9 510 aa2.91□□□□□ -1.94
PTCD3-216ENST00000487043 DPPA2Q7Z7J5 298 aa2.91□□□□□ -1.94
PTCD3-216ENST00000487043 DOLPP1Q86YN1 238 aa2.91□□□□□ -1.94
PTCD3-216ENST00000487043 MED12LQ86YW9 2145 aa2.91□□□□□ -1.94
PTCD3-216ENST00000487043 GABRG1Q8N1C3 465 aa2.91□□□□□ -1.94
PTCD3-216ENST00000487043 LRRC18Q8N456 261 aa2.91□□□□□ -1.94
PTCD3-216ENST00000487043 ZFP41Q8N8Y5 198 aa2.91□□□□□ -1.94
PTCD3-216ENST00000487043 CNEP1R1Q8N9A8 125 aa2.91□□□□□ -1.94
PTCD3-216ENST00000487043 S100ZQ8WXG8 99 aa2.91□□□□□ -1.94
PTCD3-216ENST00000487043 NRGNQ92686 78 aa2.91□□□□□ -1.94
PTCD3-216ENST00000487043 ARPC1AQ92747 370 aa2.91□□□□□ -1.94
PTCD3-216ENST00000487043 GHSRQ92847 366 aa2.91□□□□□ -1.94
PTCD3-216ENST00000487043 RPUSD4Q96CM3 377 aaKnown RBP2.91□□□□□ -1.94
PTCD3-216ENST00000487043 STARD4Q96DR4 205 aa2.91□□□□□ -1.94
PTCD3-216ENST00000487043 SMIM19Q96E16 107 aa2.91□□□□□ -1.94
PTCD3-216ENST00000487043 PGLYRP3Q96LB9 341 aa2.91□□□□□ -1.94
PTCD3-216ENST00000487043 RARRES2Q99969 163 aa2.91□□□□□ -1.94
PTCD3-216ENST00000487043 TTTY10Q9BZA0 68 aa2.91□□□□□ -1.94
PTCD3-216ENST00000487043 OR51E2Q9H255 320 aa2.91□□□□□ -1.94
PTCD3-216ENST00000487043 OR51M1Q9H341 326 aa2.91□□□□□ -1.94
PTCD3-216ENST00000487043 TXNL4BQ9NX01 149 aaKnown RBP2.91□□□□□ -1.94
PTCD3-216ENST00000487043 CALYQ9NYX4 217 aa2.91□□□□□ -1.94
PTCD3-216ENST00000487043 ZNF629Q9UEG4 869 aaPredicted RBP2.91□□□□□ -1.94
PTCD3-216ENST00000487043 TBC1D24Q9ULP9 559 aa2.91□□□□□ -1.94
PTCD3-216ENST00000487043 SSR3Q9UNL2 185 aa2.91□□□□□ -1.94
PTCD3-216ENST00000487043 DSPP15924 2871 aaKnown RBP2.91□□□□□ -1.94
PTCD3-216ENST00000487043 CFAP47Q6ZTR5 3102 aa2.91□□□□□ -1.94
PTCD3-216ENST00000487043 TLN1Q9Y490 2541 aaKnown RBP2.91□□□□□ -1.94
PTCD3-216ENST00000487043 ITPR1Q14643 2758 aa2.9□□□□□ -1.94
PTCD3-216ENST00000487043 FREM1Q5H8C1 2179 aa2.9□□□□□ -1.94
PTCD3-216ENST00000487043 NCOA6Q14686 2063 aaPredicted RBP2.9□□□□□ -1.95
PTCD3-216ENST00000487043 A0A0G2JLM5 398 aa2.9□□□□□ -1.95
PTCD3-216ENST00000487043 LOC100506127A0A0U1RQW1 187 aa2.9□□□□□ -1.95
PTCD3-216ENST00000487043 PNMA8CA0A1B0GUJ8 204 aa2.9□□□□□ -1.95
PTCD3-216ENST00000487043 TMEM269A0A1B0GVZ9 245 aa2.9□□□□□ -1.95
PTCD3-216ENST00000487043 OR6C6A6NF89 314 aa2.9□□□□□ -1.95
PTCD3-216ENST00000487043 TMEM212A6NML5 194 aa2.9□□□□□ -1.95
PTCD3-216ENST00000487043 C12orf77C9JDV5 145 aa2.9□□□□□ -1.95
PTCD3-216ENST00000487043 ZNF878C9JN71 531 aa2.9□□□□□ -1.95
PTCD3-216ENST00000487043 L7N2F9 121 aa2.9□□□□□ -1.95
PTCD3-216ENST00000487043 GABRPO00591 440 aa2.9□□□□□ -1.95
PTCD3-216ENST00000487043 AKR7A2O43488 359 aa2.9□□□□□ -1.95
PTCD3-216ENST00000487043 SGCEO43556 437 aa2.9□□□□□ -1.95
PTCD3-216ENST00000487043 GATBO75879 557 aaKnown RBP2.9□□□□□ -1.95
PTCD3-216ENST00000487043 UBL3O95164 117 aa2.9□□□□□ -1.95
PTCD3-216ENST00000487043 ISG15P05161 165 aa2.9□□□□□ -1.95
PTCD3-216ENST00000487043 COX5BP10606 129 aa2.9□□□□□ -1.95
PTCD3-216ENST00000487043 ZNF32P17041 273 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms