RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 DOCK11Q5JSL3 2073 aa7.74□□□□□ -1.17
MCF2L-227ENST00000486806 A0A1W2PPI3 338 aa7.74□□□□□ -1.17
MCF2L-227ENST00000486806 LEUTXA8MZ59 168 aa7.74□□□□□ -1.17
MCF2L-227ENST00000486806 GPR31O00270 319 aa7.74□□□□□ -1.17
MCF2L-227ENST00000486806 TXNL1O43396 289 aa7.74□□□□□ -1.17
MCF2L-227ENST00000486806 CTSDP07339 412 aaPredicted RBP7.74□□□□□ -1.17
MCF2L-227ENST00000486806 PGAM2P15259 253 aa7.74□□□□□ -1.17
MCF2L-227ENST00000486806 RND3P61587 244 aa7.74□□□□□ -1.17
MCF2L-227ENST00000486806 LPCAT3Q6P1A2 487 aa7.74□□□□□ -1.17
MCF2L-227ENST00000486806 CLEC9AQ6UXN8 241 aa7.74□□□□□ -1.17
MCF2L-227ENST00000486806 DYNAPQ8N1N2 210 aa7.74□□□□□ -1.17
MCF2L-227ENST00000486806 ZBTB34Q8NCN2 500 aa7.74□□□□□ -1.17
MCF2L-227ENST00000486806 ENKURQ8TC29 256 aa7.74□□□□□ -1.17
MCF2L-227ENST00000486806 RTN4IP1Q8WWV3 396 aaPredicted RBP7.74□□□□□ -1.17
MCF2L-227ENST00000486806 AKR1E2Q96JD6 320 aa7.74□□□□□ -1.17
MCF2L-227ENST00000486806 RTBDNQ9BSG5 229 aaPredicted RBP7.74□□□□□ -1.17
MCF2L-227ENST00000486806 MRPL20Q9BYC9 149 aaKnown RBP7.74□□□□□ -1.17
MCF2L-227ENST00000486806 C20orf85Q9H1P6 137 aa7.74□□□□□ -1.17
MCF2L-227ENST00000486806 SLC2A9Q9NRM0 540 aa7.74□□□□□ -1.17
MCF2L-227ENST00000486806 COPZ2Q9P299 210 aa7.74□□□□□ -1.17
MCF2L-227ENST00000486806 ZNF221Q9UK13 617 aa7.74□□□□□ -1.17
MCF2L-227ENST00000486806 HIVEP1P15822 2718 aa7.73□□□□□ -1.17
MCF2L-227ENST00000486806 ABCA1O95477 2261 aa7.73□□□□□ -1.17
MCF2L-227ENST00000486806 A0A0U1RQK1 487 aa7.73□□□□□ -1.17
MCF2L-227ENST00000486806 FAM240BA0A1B0GVZ2 78 aa7.73□□□□□ -1.17
MCF2L-227ENST00000486806 OOSP1A8MZH6 123 aa7.73□□□□□ -1.17
MCF2L-227ENST00000486806 TCRBP04435 133 aa7.73□□□□□ -1.17
MCF2L-227ENST00000486806 PI3P19957 117 aa7.73□□□□□ -1.17
MCF2L-227ENST00000486806 EPHA1P21709 976 aa7.73□□□□□ -1.17
MCF2L-227ENST00000486806 DUTP33316 252 aaKnown RBP7.73□□□□□ -1.17
MCF2L-227ENST00000486806 CEACAM3P40198 252 aa7.73□□□□□ -1.17
MCF2L-227ENST00000486806 REG1BP48304 166 aa7.73□□□□□ -1.17
MCF2L-227ENST00000486806 MECP2P51608 486 aaKnown RBP7.73□□□□□ -1.17
MCF2L-227ENST00000486806 LGALS4P56470 323 aa7.73□□□□□ -1.17
MCF2L-227ENST00000486806 HABP2Q14520 560 aaPredicted RBP7.73□□□□□ -1.17
MCF2L-227ENST00000486806 RGS21Q2M5E4 152 aa7.73□□□□□ -1.17
MCF2L-227ENST00000486806 PHLDA2Q53GA4 152 aa7.73□□□□□ -1.17
MCF2L-227ENST00000486806 IL17RELQ6ZVW7 336 aa7.73□□□□□ -1.17
MCF2L-227ENST00000486806 TGIF2LXQ8IUE1 241 aa7.73□□□□□ -1.17
MCF2L-227ENST00000486806 ZFAND1Q8TCF1 268 aa7.73□□□□□ -1.17
MCF2L-227ENST00000486806 DDB2Q92466 427 aa7.73□□□□□ -1.17
MCF2L-227ENST00000486806 TMEM230Q96A57 120 aa7.73□□□□□ -1.17
MCF2L-227ENST00000486806 RPEQ96AT9 228 aa7.73□□□□□ -1.17
MCF2L-227ENST00000486806 MALSU1Q96EH3 234 aa7.73□□□□□ -1.17
MCF2L-227ENST00000486806 SCGB3A2Q96PL1 93 aa7.73□□□□□ -1.17
MCF2L-227ENST00000486806 S1PR3Q99500 378 aa7.73□□□□□ -1.17
MCF2L-227ENST00000486806 NABP2Q9BQ15 211 aa7.73□□□□□ -1.17
MCF2L-227ENST00000486806 GSX1Q9H4S2 264 aaPredicted RBP7.73□□□□□ -1.17
MCF2L-227ENST00000486806 NUDT15Q9NV35 164 aa7.73□□□□□ -1.17
MCF2L-227ENST00000486806 FLVCR2Q9UPI3 526 aa7.73□□□□□ -1.17
MCF2L-227ENST00000486806 NUBP2Q9Y5Y2 271 aa7.73□□□□□ -1.17
MCF2L-227ENST00000486806 ACANP16112 2415 aa7.72□□□□□ -1.17
MCF2L-227ENST00000486806 CSPG4Q6UVK1 2322 aa7.72□□□□□ -1.17
MCF2L-227ENST00000486806 IGHV1-3A0A0C4DH29 117 aa7.72□□□□□ -1.17
MCF2L-227ENST00000486806 LINC00473A8K010 186 aa7.72□□□□□ -1.17
MCF2L-227ENST00000486806 VGLL3A8MV65 326 aa7.72□□□□□ -1.17
MCF2L-227ENST00000486806 M0R1X1 148 aa7.72□□□□□ -1.17
MCF2L-227ENST00000486806 ARPC1BO15143 372 aaKnown RBP7.72□□□□□ -1.17
MCF2L-227ENST00000486806 TNFSF12O43508 249 aa7.72□□□□□ -1.17
MCF2L-227ENST00000486806 PGLYRP1O75594 196 aaPredicted RBP7.72□□□□□ -1.17
MCF2L-227ENST00000486806 GAPDHP04406 335 aaKnown RBP7.72□□□□□ -1.17
MCF2L-227ENST00000486806 RLN1P04808 185 aa7.72□□□□□ -1.17
MCF2L-227ENST00000486806 CT45A6P0DMU7 189 aa7.72□□□□□ -1.17
MCF2L-227ENST00000486806 CT45A5P0DMU8 189 aa7.72□□□□□ -1.17
MCF2L-227ENST00000486806 CT45A7P0DMV0 189 aa7.72□□□□□ -1.17
MCF2L-227ENST00000486806 SPNP16150 400 aa7.72□□□□□ -1.17
MCF2L-227ENST00000486806 HNF1AP20823 631 aa7.72□□□□□ -1.17
MCF2L-227ENST00000486806 PAX6P26367 422 aa7.72□□□□□ -1.17
MCF2L-227ENST00000486806 PIGPP57054 158 aa7.72□□□□□ -1.17
MCF2L-227ENST00000486806 LINC00205P59089 165 aa7.72□□□□□ -1.17
MCF2L-227ENST00000486806 RPL30P62888 115 aaKnown RBP7.72□□□□□ -1.17
MCF2L-227ENST00000486806 OXA1LQ15070 435 aa7.72□□□□□ -1.17
MCF2L-227ENST00000486806 SSX2Q16385 188 aa7.72□□□□□ -1.17
MCF2L-227ENST00000486806 CCDC144NLQ6NUI1 221 aa7.72□□□□□ -1.17
MCF2L-227ENST00000486806 ZNF66Q6ZN08 573 aa7.72□□□□□ -1.17
MCF2L-227ENST00000486806 CMTM1Q8IZ96 169 aa7.72□□□□□ -1.17
MCF2L-227ENST00000486806 OR8H3Q8N146 312 aa7.72□□□□□ -1.17
MCF2L-227ENST00000486806 ZNF383Q8NA42 475 aa7.72□□□□□ -1.17
MCF2L-227ENST00000486806 ADAD2Q8NCV1 583 aaKnown RBP7.72□□□□□ -1.17
MCF2L-227ENST00000486806 OR5AN1Q8NGI8 311 aa7.72□□□□□ -1.17
MCF2L-227ENST00000486806 CFHR4Q92496 578 aa7.72□□□□□ -1.17
MCF2L-227ENST00000486806 GPHA2Q96T91 129 aa7.72□□□□□ -1.17
MCF2L-227ENST00000486806 HSD17B10Q99714 261 aaKnown RBP7.72□□□□□ -1.17
MCF2L-227ENST00000486806 C14orf166Q9Y224 244 aaKnown RBP7.72□□□□□ -1.17
MCF2L-227ENST00000486806 HILPDAQ9Y5L2 63 aa7.72□□□□□ -1.17
MCF2L-227ENST00000486806 SOX21Q9Y651 276 aaPredicted RBP7.72□□□□□ -1.17
MCF2L-227ENST00000486806 CRYM-AS1A6NIL9 109 aa7.71□□□□□ -1.18
MCF2L-227ENST00000486806 H0YJW9 148 aa7.71□□□□□ -1.18
MCF2L-227ENST00000486806 TIMM23O14925 209 aa7.71□□□□□ -1.18
MCF2L-227ENST00000486806 FBP1P09467 338 aa7.71□□□□□ -1.18
MCF2L-227ENST00000486806 THBS3P49746 956 aa7.71□□□□□ -1.18
MCF2L-227ENST00000486806 DYNLT3P51808 116 aa7.71□□□□□ -1.18
MCF2L-227ENST00000486806 BRWD1-AS2P59051 145 aa7.71□□□□□ -1.18
MCF2L-227ENST00000486806 UBE2MP61081 183 aaKnown RBP7.71□□□□□ -1.18
MCF2L-227ENST00000486806 SUPT4H1P63272 117 aaKnown RBP7.71□□□□□ -1.18
MCF2L-227ENST00000486806 DHODHQ02127 395 aa7.71□□□□□ -1.18
MCF2L-227ENST00000486806 ABCA11PQ4W5N1 156 aa7.71□□□□□ -1.18
MCF2L-227ENST00000486806 KCTD9Q7L273 389 aa7.71□□□□□ -1.18
MCF2L-227ENST00000486806 TMED4Q7Z7H5 227 aa7.71□□□□□ -1.18
MCF2L-227ENST00000486806 TBC1D26Q86UD7 250 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms