RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 CALYQ9NYX4 217 aa16.91■□□□□ 0.3
HPS3-206ENST00000486530 STRAPQ9Y3F4 350 aaKnown RBP16.91■□□□□ 0.3
HPS3-206ENST00000486530 USF3Q68DE3 2245 aa16.91■□□□□ 0.3
HPS3-206ENST00000486530 PCNX1Q96RV3 2341 aa16.91■□□□□ 0.3
HPS3-206ENST00000486530 TMEM218A2RU14 115 aa16.9■□□□□ 0.3
HPS3-206ENST00000486530 TOR1AO14656 332 aa16.9■□□□□ 0.3
HPS3-206ENST00000486530 TXNL1O43396 289 aa16.9■□□□□ 0.3
HPS3-206ENST00000486530 APOC3P02656 99 aa16.9■□□□□ 0.3
HPS3-206ENST00000486530 P0C879 139 aa16.9■□□□□ 0.3
HPS3-206ENST00000486530 GPR12P47775 334 aa16.9■□□□□ 0.3
HPS3-206ENST00000486530 ZNF816Q0VGE8 651 aaPredicted RBP16.9■□□□□ 0.3
HPS3-206ENST00000486530 OR2B11Q5JQS5 317 aa16.9■□□□□ 0.3
HPS3-206ENST00000486530 ADAM5Q6NVV9 412 aa16.9■□□□□ 0.3
HPS3-206ENST00000486530 LYPD6BQ8NI32 183 aa16.9■□□□□ 0.3
HPS3-206ENST00000486530 GAFA1Q96PS6 74 aa16.9■□□□□ 0.3
HPS3-206ENST00000486530 LRRC30A6NM36 301 aa16.9■□□□□ 0.3
HPS3-206ENST00000486530 C17orf98A8MV24 154 aa16.9■□□□□ 0.3
HPS3-206ENST00000486530 B8ZZF3 427 aa16.9■□□□□ 0.3
HPS3-206ENST00000486530 S1PR2O95136 353 aa16.9■□□□□ 0.3
HPS3-206ENST00000486530 SULT1A1P50225 295 aa16.9■□□□□ 0.3
HPS3-206ENST00000486530 LOXL3P58215 753 aa16.9■□□□□ 0.3
HPS3-206ENST00000486530 TAS2R30P59541 319 aa16.9■□□□□ 0.3
HPS3-206ENST00000486530 CGB3P0DN86 165 aa16.89■□□□□ 0.29
HPS3-206ENST00000486530 CGB7P0DN87 165 aa16.89■□□□□ 0.29
HPS3-206ENST00000486530 SELLP14151 372 aa16.89■□□□□ 0.29
HPS3-206ENST00000486530 CCL8P80075 99 aa16.89■□□□□ 0.29
HPS3-206ENST00000486530 FAM209AQ5JX71 171 aa16.89■□□□□ 0.29
HPS3-206ENST00000486530 ZNF788Q6ZQV5 615 aa16.89■□□□□ 0.29
HPS3-206ENST00000486530 TMEM217Q8N7C4 229 aa16.89■□□□□ 0.29
HPS3-206ENST00000486530 CD300LFQ8TDQ1 290 aa16.89■□□□□ 0.29
HPS3-206ENST00000486530 ATP5SQ99766 215 aa16.89■□□□□ 0.29
HPS3-206ENST00000486530 CACFD1Q9UGQ2 172 aa16.89■□□□□ 0.29
HPS3-206ENST00000486530 TRGV10A0A0A0MS01 117 aa16.88■□□□□ 0.29
HPS3-206ENST00000486530 DFFBO76075 338 aa16.88■□□□□ 0.29
HPS3-206ENST00000486530 CLDN14O95500 239 aa16.88■□□□□ 0.29
HPS3-206ENST00000486530 G6PCP35575 357 aa16.88■□□□□ 0.29
HPS3-206ENST00000486530 BRWD1-AS2P59051 145 aa16.88■□□□□ 0.29
HPS3-206ENST00000486530 DEFB108BQ8NET1 73 aa16.88■□□□□ 0.29
HPS3-206ENST00000486530 PSENENQ9NZ42 101 aa16.88■□□□□ 0.29
HPS3-206ENST00000486530 LINC00473A8K010 186 aa16.88■□□□□ 0.29
HPS3-206ENST00000486530 H3BP45 60 aa16.88■□□□□ 0.29
HPS3-206ENST00000486530 TRIM77I1YAP6 450 aa16.88■□□□□ 0.29
HPS3-206ENST00000486530 ITGB1BP1O14713 200 aa16.88■□□□□ 0.29
HPS3-206ENST00000486530 KRASP01116 189 aa16.88■□□□□ 0.29
HPS3-206ENST00000486530 SFTPCP11686 197 aa16.88■□□□□ 0.29
HPS3-206ENST00000486530 ATP6V0CP27449 155 aa16.88■□□□□ 0.29
HPS3-206ENST00000486530 CAMLGP49069 296 aa16.88■□□□□ 0.29
HPS3-206ENST00000486530 TLE1Q04724 770 aa16.88■□□□□ 0.29
HPS3-206ENST00000486530 AKR1C1Q04828 323 aa16.88■□□□□ 0.29
HPS3-206ENST00000486530 LY6DQ14210 128 aa16.88■□□□□ 0.29
HPS3-206ENST00000486530 TSNAXQ99598 290 aaKnown RBP16.88■□□□□ 0.29
HPS3-206ENST00000486530 EGLN1Q9GZT9 426 aa16.88■□□□□ 0.29
HPS3-206ENST00000486530 KCNJ16Q9NPI9 418 aa16.88■□□□□ 0.29
HPS3-206ENST00000486530 TMA7Q9Y2S6 64 aaKnown RBP16.88■□□□□ 0.29
HPS3-206ENST00000486530 KBTBD11-OT1A0A1B0GTJ5 212 aa16.87■□□□□ 0.29
HPS3-206ENST00000486530 SIGLEC5O15389 551 aa16.87■□□□□ 0.29
HPS3-206ENST00000486530 GYPAP02724 150 aa16.87■□□□□ 0.29
HPS3-206ENST00000486530 IAPPP10997 89 aa16.87■□□□□ 0.29
HPS3-206ENST00000486530 C17orf58Q2M2W7 97 aa16.87■□□□□ 0.29
HPS3-206ENST00000486530 NCMAPQ5T1S8 102 aa16.87■□□□□ 0.29
HPS3-206ENST00000486530 DUX4L9Q6RFH8 374 aaPredicted RBP16.87■□□□□ 0.29
HPS3-206ENST00000486530 GNPNAT1Q96EK6 184 aaPredicted RBP16.87■□□□□ 0.29
HPS3-206ENST00000486530 CCL13Q99616 98 aa16.87■□□□□ 0.29
HPS3-206ENST00000486530 MS4A7Q9GZW8 240 aaPredicted RBP16.87■□□□□ 0.29
HPS3-206ENST00000486530 TREM1Q9NP99 234 aa16.87■□□□□ 0.29
HPS3-206ENST00000486530 CLN8Q9UBY8 286 aa16.87■□□□□ 0.29
HPS3-206ENST00000486530 HSPB7Q9UBY9 170 aa16.87■□□□□ 0.29
HPS3-206ENST00000486530 DIDO1Q9BTC0 2240 aaKnown RBP16.87■□□□□ 0.29
HPS3-206ENST00000486530 NKX6-3A6NJ46 265 aa16.86■□□□□ 0.29
HPS3-206ENST00000486530 RAB29O14966 203 aa16.86■□□□□ 0.29
HPS3-206ENST00000486530 ATXN7O15265 892 aaPredicted RBP16.86■□□□□ 0.29
HPS3-206ENST00000486530 PRH1P02810 166 aa16.86■□□□□ 0.29
HPS3-206ENST00000486530 DUTP33316 252 aaKnown RBP16.86■□□□□ 0.29
HPS3-206ENST00000486530 RAB7AP51149 207 aa16.86■□□□□ 0.29
HPS3-206ENST00000486530 SRSF3P84103 164 aaKnown RBP16.86■□□□□ 0.29
HPS3-206ENST00000486530 TNFRSF9Q07011 255 aa16.86■□□□□ 0.29
HPS3-206ENST00000486530 ZNF616Q08AN1 781 aa16.86■□□□□ 0.29
HPS3-206ENST00000486530 TMEM267Q0VDI3 215 aaPredicted RBP16.86■□□□□ 0.29
HPS3-206ENST00000486530 MIDNQ504T8 468 aa16.86■□□□□ 0.29
HPS3-206ENST00000486530 TMEM182Q6ZP80 229 aaPredicted RBP16.86■□□□□ 0.29
HPS3-206ENST00000486530 COMMD1Q8N668 190 aa16.86■□□□□ 0.29
HPS3-206ENST00000486530 SAP30LQ9HAJ7 183 aa16.86■□□□□ 0.29
HPS3-206ENST00000486530 C19orf12Q9NSK7 152 aa16.86■□□□□ 0.29
HPS3-206ENST00000486530 POLEQ07864 2286 aa16.86■□□□□ 0.29
HPS3-206ENST00000486530 SHISA9B4DS77 424 aa16.86■□□□□ 0.29
HPS3-206ENST00000486530 UMAD1C9J7I0 102 aa16.86■□□□□ 0.29
HPS3-206ENST00000486530 UBE2KP61086 200 aa16.86■□□□□ 0.29
HPS3-206ENST00000486530 C1orf87Q8N0U7 546 aa16.86■□□□□ 0.29
HPS3-206ENST00000486530 FAM216BQ8N7L0 139 aa16.86■□□□□ 0.29
HPS3-206ENST00000486530 OR2G3Q8NGZ4 309 aa16.86■□□□□ 0.29
HPS3-206ENST00000486530 LRRC46Q96FV0 321 aa16.86■□□□□ 0.29
HPS3-206ENST00000486530 IFI27L2Q9H2X8 130 aa16.86■□□□□ 0.29
HPS3-206ENST00000486530 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.86■□□□□ 0.29
HPS3-206ENST00000486530 GFOD1Q9NXC2 390 aa16.86■□□□□ 0.29
HPS3-206ENST00000486530 TSPAN15O95858 294 aa16.85■□□□□ 0.29
HPS3-206ENST00000486530 DEFA5Q01523 94 aa16.85■□□□□ 0.29
HPS3-206ENST00000486530 TMEM30BQ3MIR4 351 aa16.85■□□□□ 0.29
HPS3-206ENST00000486530 H2BFWTQ7Z2G1 175 aa16.85■□□□□ 0.29
HPS3-206ENST00000486530 TGIF2LYQ8IUE0 185 aa16.85■□□□□ 0.29
HPS3-206ENST00000486530 DMRTC2Q8IXT2 367 aaPredicted RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms