RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 TMEM230Q96A57 120 aa7.68□□□□□ -1.18
TMEM39A-208ENST00000486159 CCL13Q99616 98 aa7.68□□□□□ -1.18
TMEM39A-208ENST00000486159 CABLES2Q9BTV7 478 aa7.68□□□□□ -1.18
TMEM39A-208ENST00000486159 PDCD10Q9BUL8 212 aa7.68□□□□□ -1.18
TMEM39A-208ENST00000486159 RSRP1Q9BUV0 290 aa7.68□□□□□ -1.18
TMEM39A-208ENST00000486159 SIRPDQ9H106 197 aa7.68□□□□□ -1.18
TMEM39A-208ENST00000486159 PRDM13Q9H4Q3 707 aa7.68□□□□□ -1.18
TMEM39A-208ENST00000486159 ZNF581Q9P0T4 197 aa7.68□□□□□ -1.18
TMEM39A-208ENST00000486159 KMT2CQ8NEZ4 4911 aaKnown RBP7.68□□□□□ -1.18
TMEM39A-208ENST00000486159 A0A0D9SG52 128 aa7.67□□□□□ -1.18
TMEM39A-208ENST00000486159 TEX13DA0A0J9YY54 714 aaPredicted RBP7.67□□□□□ -1.18
TMEM39A-208ENST00000486159 TMEM30CPA0ZSE6 113 aa7.67□□□□□ -1.18
TMEM39A-208ENST00000486159 OOEPA6NGQ2 149 aa7.67□□□□□ -1.18
TMEM39A-208ENST00000486159 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.67□□□□□ -1.18
TMEM39A-208ENST00000486159 DVL1O14640 695 aa7.67□□□□□ -1.18
TMEM39A-208ENST00000486159 TOX4O94842 621 aa7.67□□□□□ -1.18
TMEM39A-208ENST00000486159 FSTL3O95633 263 aa7.67□□□□□ -1.18
TMEM39A-208ENST00000486159 LHBP01229 141 aa7.67□□□□□ -1.18
TMEM39A-208ENST00000486159 PPYP01298 95 aa7.67□□□□□ -1.18
TMEM39A-208ENST00000486159 IFNA21P01568 189 aa7.67□□□□□ -1.18
TMEM39A-208ENST00000486159 RPA2P15927 270 aa7.67□□□□□ -1.18
TMEM39A-208ENST00000486159 GLRA1P23415 457 aa7.67□□□□□ -1.18
TMEM39A-208ENST00000486159 SUPT4H1P63272 117 aaKnown RBP7.67□□□□□ -1.18
TMEM39A-208ENST00000486159 HLA-DRB3P79483 266 aa7.67□□□□□ -1.18
TMEM39A-208ENST00000486159 SLC35E4Q6ICL7 350 aa7.67□□□□□ -1.18
TMEM39A-208ENST00000486159 PNKDQ8N490 385 aa7.67□□□□□ -1.18
TMEM39A-208ENST00000486159 LRTM2Q8N967 370 aa7.67□□□□□ -1.18
TMEM39A-208ENST00000486159 ZNF565Q8N9K5 539 aa7.67□□□□□ -1.18
TMEM39A-208ENST00000486159 OR11H4Q8NGC9 324 aa7.67□□□□□ -1.18
TMEM39A-208ENST00000486159 OR5T2Q8NGG2 359 aa7.67□□□□□ -1.18
TMEM39A-208ENST00000486159 CASTOR1Q8WTX7 329 aa7.67□□□□□ -1.18
TMEM39A-208ENST00000486159 WFDC12Q8WWY7 111 aa7.67□□□□□ -1.18
TMEM39A-208ENST00000486159 ZNF488Q96MN9 340 aa7.67□□□□□ -1.18
TMEM39A-208ENST00000486159 FXYD6Q9H0Q3 95 aa7.67□□□□□ -1.18
TMEM39A-208ENST00000486159 NCOR1P1Q9H4R4 102 aa7.67□□□□□ -1.18
TMEM39A-208ENST00000486159 NAA60Q9H7X0 242 aa7.67□□□□□ -1.18
TMEM39A-208ENST00000486159 ZFP57Q9NU63 452 aa7.67□□□□□ -1.18
TMEM39A-208ENST00000486159 MBNL3Q9NUK0 354 aaKnown RBP7.67□□□□□ -1.18
TMEM39A-208ENST00000486159 KCNIP1Q9NZI2 227 aa7.67□□□□□ -1.18
TMEM39A-208ENST00000486159 MGAM2Q2M2H8 2515 aa7.67□□□□□ -1.18
TMEM39A-208ENST00000486159 TRBV6-7A0A0A0MS04 114 aa7.66□□□□□ -1.18
TMEM39A-208ENST00000486159 IGHV1-69DA0A0B4J2H0 117 aa7.66□□□□□ -1.18
TMEM39A-208ENST00000486159 hCG_1807616A0A1W2PRN6 198 aa7.66□□□□□ -1.18
TMEM39A-208ENST00000486159 C5orf51A6NDU8 294 aa7.66□□□□□ -1.18
TMEM39A-208ENST00000486159 L7N2F9 121 aa7.66□□□□□ -1.18
TMEM39A-208ENST00000486159 GPR31O00270 319 aa7.66□□□□□ -1.18
TMEM39A-208ENST00000486159 ENSAO43768 121 aaKnown RBP7.66□□□□□ -1.18
TMEM39A-208ENST00000486159 IGHV1-69P01742 117 aa7.66□□□□□ -1.18
TMEM39A-208ENST00000486159 PET100P0DJ07 73 aa7.66□□□□□ -1.18
TMEM39A-208ENST00000486159 AADACP22760 399 aa7.66□□□□□ -1.18
TMEM39A-208ENST00000486159 PAX6P26367 422 aa7.66□□□□□ -1.18
TMEM39A-208ENST00000486159 DUSP1P28562 367 aa7.66□□□□□ -1.18
TMEM39A-208ENST00000486159 PIGPP57054 158 aa7.66□□□□□ -1.18
TMEM39A-208ENST00000486159 KLRD1Q13241 179 aa7.66□□□□□ -1.18
TMEM39A-208ENST00000486159 ZNF345Q14585 488 aa7.66□□□□□ -1.18
TMEM39A-208ENST00000486159 PDCD1Q15116 288 aa7.66□□□□□ -1.18
TMEM39A-208ENST00000486159 MSMO1Q15800 293 aa7.66□□□□□ -1.18
TMEM39A-208ENST00000486159 C2orf68Q2NKX9 166 aa7.66□□□□□ -1.18
TMEM39A-208ENST00000486159 LGALSLQ3ZCW2 172 aaPredicted RBP7.66□□□□□ -1.18
TMEM39A-208ENST00000486159 MIDNQ504T8 468 aa7.66□□□□□ -1.18
TMEM39A-208ENST00000486159 PDLIM3Q53GG5 364 aaPredicted RBP7.66□□□□□ -1.18
TMEM39A-208ENST00000486159 C6orf183Q5T699 404 aa7.66□□□□□ -1.18
TMEM39A-208ENST00000486159 LCE2AQ5TA79 106 aaPredicted RBP7.66□□□□□ -1.18
TMEM39A-208ENST00000486159 SAMD5Q5TGI4 173 aa7.66□□□□□ -1.18
TMEM39A-208ENST00000486159 GPR157Q5UAW9 335 aa7.66□□□□□ -1.18
TMEM39A-208ENST00000486159 CMTM1Q8IZ96 169 aa7.66□□□□□ -1.18
TMEM39A-208ENST00000486159 FAM216BQ8N7L0 139 aa7.66□□□□□ -1.18
TMEM39A-208ENST00000486159 OR10J5Q8NHC4 309 aa7.66□□□□□ -1.18
TMEM39A-208ENST00000486159 THAP6Q8TBB0 222 aa7.66□□□□□ -1.18
TMEM39A-208ENST00000486159 LRRC29Q8WV35 223 aa7.66□□□□□ -1.18
TMEM39A-208ENST00000486159 RTN4IP1Q8WWV3 396 aaPredicted RBP7.66□□□□□ -1.18
TMEM39A-208ENST00000486159 DYRK2Q92630 601 aa7.66□□□□□ -1.18
TMEM39A-208ENST00000486159 KIRREL1Q96J84 757 aa7.66□□□□□ -1.18
TMEM39A-208ENST00000486159 C2orf50Q96LR7 162 aa7.66□□□□□ -1.18
TMEM39A-208ENST00000486159 RAB9BQ9NP90 201 aa7.66□□□□□ -1.18
TMEM39A-208ENST00000486159 PLSCR3Q9NRY6 295 aa7.66□□□□□ -1.18
TMEM39A-208ENST00000486159 IL36RNQ9UBH0 155 aa7.66□□□□□ -1.18
TMEM39A-208ENST00000486159 OR2W1Q9Y3N9 320 aa7.66□□□□□ -1.18
TMEM39A-208ENST00000486159 DUXBA0A1W2PPF3 345 aa7.65□□□□□ -1.18
TMEM39A-208ENST00000486159 SIRPB1O00241 398 aa7.65□□□□□ -1.18
TMEM39A-208ENST00000486159 OR2F2O95006 317 aa7.65□□□□□ -1.18
TMEM39A-208ENST00000486159 SIX6O95475 246 aa7.65□□□□□ -1.18
TMEM39A-208ENST00000486159 IFNA7P01567 189 aa7.65□□□□□ -1.18
TMEM39A-208ENST00000486159 SCTP09683 121 aa7.65□□□□□ -1.18
TMEM39A-208ENST00000486159 PSMB6P28072 239 aa7.65□□□□□ -1.18
TMEM39A-208ENST00000486159 S100A11P31949 105 aa7.65□□□□□ -1.18
TMEM39A-208ENST00000486159 OR2F1Q13607 317 aa7.65□□□□□ -1.18
TMEM39A-208ENST00000486159 HMGN3Q15651 99 aa7.65□□□□□ -1.18
TMEM39A-208ENST00000486159 Q5BKY6 102 aa7.65□□□□□ -1.18
TMEM39A-208ENST00000486159 IGSF11Q5DX21 431 aa7.65□□□□□ -1.18
TMEM39A-208ENST00000486159 C11orf87Q6NUJ2 197 aa7.65□□□□□ -1.18
TMEM39A-208ENST00000486159 Q6ZPA2 131 aa7.65□□□□□ -1.18
TMEM39A-208ENST00000486159 VMO1Q7Z5L0 202 aa7.65□□□□□ -1.18
TMEM39A-208ENST00000486159 LDLRAD3Q86YD5 345 aa7.65□□□□□ -1.18
TMEM39A-208ENST00000486159 H1FOOQ8IZA3 346 aaPredicted RBP7.65□□□□□ -1.18
TMEM39A-208ENST00000486159 LGI3Q8N145 548 aa7.65□□□□□ -1.18
TMEM39A-208ENST00000486159 BATF2Q8N1L9 274 aa7.65□□□□□ -1.18
TMEM39A-208ENST00000486159 TOMM40LQ969M1 308 aa7.65□□□□□ -1.18
TMEM39A-208ENST00000486159 AKR1E2Q96JD6 320 aa7.65□□□□□ -1.18
TMEM39A-208ENST00000486159 TOLLIPQ9H0E2 274 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms