RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 GADD45AP24522 165 aa14.4□□□□□ -0.1
PRPF40A-209ENST00000486100 PSMB8P28062 276 aa14.4□□□□□ -0.1
PRPF40A-209ENST00000486100 PSMB9P28065 219 aa14.4□□□□□ -0.1
PRPF40A-209ENST00000486100 PPIFP30405 207 aaKnown RBP14.4□□□□□ -0.1
PRPF40A-209ENST00000486100 FGF9P31371 208 aaPredicted RBP14.4□□□□□ -0.1
PRPF40A-209ENST00000486100 SERPINB10P48595 397 aa14.4□□□□□ -0.1
PRPF40A-209ENST00000486100 NR2C2APQ86WQ0 139 aa14.4□□□□□ -0.1
PRPF40A-209ENST00000486100 RDH8Q9NYR8 311 aa14.4□□□□□ -0.1
PRPF40A-209ENST00000486100 ZNF221Q9UK13 617 aa14.4□□□□□ -0.1
PRPF40A-209ENST00000486100 WSB1Q9Y6I7 421 aa14.4□□□□□ -0.1
PRPF40A-209ENST00000486100 A0A0B4J203 849 aa14.39□□□□□ -0.11
PRPF40A-209ENST00000486100 G3V318 75 aa14.39□□□□□ -0.11
PRPF40A-209ENST00000486100 H7C2Y5 167 aa14.39□□□□□ -0.11
PRPF40A-209ENST00000486100 MFNGO00587 321 aa14.39□□□□□ -0.11
PRPF40A-209ENST00000486100 RRHO14718 337 aa14.39□□□□□ -0.11
PRPF40A-209ENST00000486100 ATP6V0E1O15342 81 aa14.39□□□□□ -0.11
PRPF40A-209ENST00000486100 FABP7O15540 132 aa14.39□□□□□ -0.11
PRPF40A-209ENST00000486100 RBBP9O75884 186 aa14.39□□□□□ -0.11
PRPF40A-209ENST00000486100 GSTP1P09211 210 aaKnown RBP14.39□□□□□ -0.11
PRPF40A-209ENST00000486100 GNB3P16520 340 aa14.39□□□□□ -0.11
PRPF40A-209ENST00000486100 KRTAP10-11P60412 298 aa14.39□□□□□ -0.11
PRPF40A-209ENST00000486100 EGFEM1PQ0D2K5 195 aa14.39□□□□□ -0.11
PRPF40A-209ENST00000486100 OR8U1Q8NH10 309 aa14.39□□□□□ -0.11
PRPF40A-209ENST00000486100 DUX3Q96PT4 197 aa14.39□□□□□ -0.11
PRPF40A-209ENST00000486100 FBXL15Q9H469 300 aa14.39□□□□□ -0.11
PRPF40A-209ENST00000486100 PARP11Q9NR21 331 aa14.39□□□□□ -0.11
PRPF40A-209ENST00000486100 TXNL4BQ9NX01 149 aaKnown RBP14.39□□□□□ -0.11
PRPF40A-209ENST00000486100 WASHC3Q9Y3C0 194 aa14.39□□□□□ -0.11
PRPF40A-209ENST00000486100 FCGR3AP08637 254 aa14.38□□□□□ -0.11
PRPF40A-209ENST00000486100 HIST1H1DP16402 221 aaKnown RBP14.38□□□□□ -0.11
PRPF40A-209ENST00000486100 ZNF660Q6AZW8 331 aaPredicted RBP14.38□□□□□ -0.11
PRPF40A-209ENST00000486100 DRAXINQ8NBI3 349 aaPredicted RBP14.38□□□□□ -0.11
PRPF40A-209ENST00000486100 MYOZ3Q8TDC0 251 aa14.38□□□□□ -0.11
PRPF40A-209ENST00000486100 STUB1Q9UNE7 303 aa14.38□□□□□ -0.11
PRPF40A-209ENST00000486100 A0A075B6Q4 140 aa14.37□□□□□ -0.11
PRPF40A-209ENST00000486100 TRAV41A0A0B4J266 112 aa14.37□□□□□ -0.11
PRPF40A-209ENST00000486100 NOTOA8MTQ0 251 aa14.37□□□□□ -0.11
PRPF40A-209ENST00000486100 DIRAS3O95661 229 aa14.37□□□□□ -0.11
PRPF40A-209ENST00000486100 IGLV1-40P01703 118 aa14.37□□□□□ -0.11
PRPF40A-209ENST00000486100 GSTT2P0CG29 244 aa14.37□□□□□ -0.11
PRPF40A-209ENST00000486100 GSTT2BP0CG30 244 aa14.37□□□□□ -0.11
PRPF40A-209ENST00000486100 HOXD3P31249 432 aaPredicted RBP14.37□□□□□ -0.11
PRPF40A-209ENST00000486100 KIAA0141Q14154 515 aaPredicted RBP14.37□□□□□ -0.11
PRPF40A-209ENST00000486100 ARL6IP1Q15041 203 aa14.37□□□□□ -0.11
PRPF40A-209ENST00000486100 SRSF7Q16629 238 aaKnown RBP eCLIP14.37□□□□□ -0.11
PRPF40A-209ENST00000486100 IGSF11Q5DX21 431 aa14.37□□□□□ -0.11
PRPF40A-209ENST00000486100 TMEM65Q6PI78 240 aa14.37□□□□□ -0.11
PRPF40A-209ENST00000486100 TPRA1Q86W33 373 aa14.37□□□□□ -0.11
PRPF40A-209ENST00000486100 ZNF383Q8NA42 475 aa14.37□□□□□ -0.11
PRPF40A-209ENST00000486100 MINDY2Q8NBR6 621 aa14.37□□□□□ -0.11
PRPF40A-209ENST00000486100 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.37□□□□□ -0.11
PRPF40A-209ENST00000486100 OR10J5Q8NHC4 309 aa14.37□□□□□ -0.11
PRPF40A-209ENST00000486100 C4orf3Q8WVX3 66 aa14.37□□□□□ -0.11
PRPF40A-209ENST00000486100 DPF1Q92782 380 aa14.37□□□□□ -0.11
PRPF40A-209ENST00000486100 CABLES2Q9BTV7 478 aa14.37□□□□□ -0.11
PRPF40A-209ENST00000486100 KLK15Q9H2R5 256 aa14.37□□□□□ -0.11
PRPF40A-209ENST00000486100 SSR3Q9UNL2 185 aa14.37□□□□□ -0.11
PRPF40A-209ENST00000486100 GAB2Q9UQC2 676 aa14.37□□□□□ -0.11
PRPF40A-209ENST00000486100 TRBV6-7A0A0A0MS04 114 aa14.36□□□□□ -0.11
PRPF40A-209ENST00000486100 K7EIL1 84 aa14.36□□□□□ -0.11
PRPF40A-209ENST00000486100 FCN1O00602 326 aa14.36□□□□□ -0.11
PRPF40A-209ENST00000486100 BET1O15155 118 aa14.36□□□□□ -0.11
PRPF40A-209ENST00000486100 TFAP2AP05549 437 aa14.36□□□□□ -0.11
PRPF40A-209ENST00000486100 CX3CL1P78423 397 aa14.36□□□□□ -0.11
PRPF40A-209ENST00000486100 PLGLAQ15195 96 aa14.36□□□□□ -0.11
PRPF40A-209ENST00000486100 DEFB136Q30KP8 78 aa14.36□□□□□ -0.11
PRPF40A-209ENST00000486100 ZNF773Q6PK81 442 aa14.36□□□□□ -0.11
PRPF40A-209ENST00000486100 UBE2E2Q96LR5 201 aa14.36□□□□□ -0.11
PRPF40A-209ENST00000486100 CENPOQ9BU64 300 aa14.36□□□□□ -0.11
PRPF40A-209ENST00000486100 ATG5Q9H1Y0 275 aa14.36□□□□□ -0.11
PRPF40A-209ENST00000486100 ZNF230Q9UIE0 474 aaPredicted RBP14.36□□□□□ -0.11
PRPF40A-209ENST00000486100 SMIM30A4D0T7 59 aa14.35□□□□□ -0.11
PRPF40A-209ENST00000486100 OR8U9P0C7N5 309 aa14.35□□□□□ -0.11
PRPF40A-209ENST00000486100 TALDO1P37837 337 aa14.35□□□□□ -0.11
PRPF40A-209ENST00000486100 RAB9AP51151 201 aa14.35□□□□□ -0.11
PRPF40A-209ENST00000486100 CRIP2P52943 208 aaPredicted RBP14.35□□□□□ -0.11
PRPF40A-209ENST00000486100 RAB25P57735 213 aa14.35□□□□□ -0.11
PRPF40A-209ENST00000486100 LINC00205P59089 165 aa14.35□□□□□ -0.11
PRPF40A-209ENST00000486100 RPS16P62249 146 aaKnown RBP14.35□□□□□ -0.11
PRPF40A-209ENST00000486100 NDPQ00604 133 aa14.35□□□□□ -0.11
PRPF40A-209ENST00000486100 ARFRP1Q13795 201 aa14.35□□□□□ -0.11
PRPF40A-209ENST00000486100 PSG5Q15238 335 aa14.35□□□□□ -0.11
PRPF40A-209ENST00000486100 CDNFQ49AH0 187 aa14.35□□□□□ -0.11
PRPF40A-209ENST00000486100 Q6ZS49 121 aa14.35□□□□□ -0.11
PRPF40A-209ENST00000486100 PDPNQ86YL7 162 aa14.35□□□□□ -0.11
PRPF40A-209ENST00000486100 ZNF491Q8N8L2 437 aa14.35□□□□□ -0.11
PRPF40A-209ENST00000486100 MAFIPQ8WZ33 124 aa14.35□□□□□ -0.11
PRPF40A-209ENST00000486100 VSIG4Q9Y279 399 aa14.35□□□□□ -0.11
PRPF40A-209ENST00000486100 NUBP2Q9Y5Y2 271 aa14.35□□□□□ -0.11
PRPF40A-209ENST00000486100 M0R1X1 148 aa14.34□□□□□ -0.11
PRPF40A-209ENST00000486100 APOA2P02652 100 aa14.34□□□□□ -0.11
PRPF40A-209ENST00000486100 IGKV1-16P04430 117 aa14.34□□□□□ -0.11
PRPF40A-209ENST00000486100 TMEM267Q0VDI3 215 aaPredicted RBP14.34□□□□□ -0.11
PRPF40A-209ENST00000486100 C19orf54Q5BKX5 351 aa14.34□□□□□ -0.11
PRPF40A-209ENST00000486100 ZNF562Q6V9R5 426 aa14.34□□□□□ -0.11
PRPF40A-209ENST00000486100 OR5M8Q8NGP6 311 aa14.34□□□□□ -0.11
PRPF40A-209ENST00000486100 FLYWCH2Q96CP2 140 aaKnown RBP14.34□□□□□ -0.11
PRPF40A-209ENST00000486100 TSNAXQ99598 290 aaKnown RBP14.34□□□□□ -0.11
PRPF40A-209ENST00000486100 OR51E2Q9H255 320 aa14.34□□□□□ -0.11
PRPF40A-209ENST00000486100 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms