RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 TMEM268Q5VZI3 342 aa11.79□□□□□ -0.52
COL9A1-207ENST00000486080 LGI3Q8N145 548 aa11.79□□□□□ -0.52
COL9A1-207ENST00000486080 LRTM2Q8N967 370 aa11.79□□□□□ -0.52
COL9A1-207ENST00000486080 FAM216AQ8WUB2 273 aa11.79□□□□□ -0.52
COL9A1-207ENST00000486080 RAB39BQ96DA2 213 aa11.79□□□□□ -0.52
COL9A1-207ENST00000486080 C18orf12Q96KH6 178 aa11.79□□□□□ -0.52
COL9A1-207ENST00000486080 TMEM133Q9H2Q1 129 aa11.79□□□□□ -0.52
COL9A1-207ENST00000486080 METTL8Q9H825 291 aaKnown RBP11.79□□□□□ -0.52
COL9A1-207ENST00000486080 RAB18Q9NP72 206 aa11.79□□□□□ -0.52
COL9A1-207ENST00000486080 A0A087X0M5 115 aa11.78□□□□□ -0.52
COL9A1-207ENST00000486080 A0A1B0GX30 115 aa11.78□□□□□ -0.52
COL9A1-207ENST00000486080 FAM157AC9JC47 383 aa11.78□□□□□ -0.52
COL9A1-207ENST00000486080 M0R1X1 148 aa11.78□□□□□ -0.52
COL9A1-207ENST00000486080 GIPP09681 153 aaPredicted RBP11.78□□□□□ -0.52
COL9A1-207ENST00000486080 NKX2-5P52952 324 aaPredicted RBP11.78□□□□□ -0.52
COL9A1-207ENST00000486080 BRWD1-AS2P59051 145 aa11.78□□□□□ -0.52
COL9A1-207ENST00000486080 PAX2Q02962 417 aa11.78□□□□□ -0.52
COL9A1-207ENST00000486080 CLEC12BQ2HXU8 276 aa11.78□□□□□ -0.52
COL9A1-207ENST00000486080 SELENOHQ8IZQ5 122 aaKnown RBP11.78□□□□□ -0.52
COL9A1-207ENST00000486080 ABHD12Q8N2K0 398 aa11.78□□□□□ -0.52
COL9A1-207ENST00000486080 TCTEX1D2Q8WW35 142 aa11.78□□□□□ -0.52
COL9A1-207ENST00000486080 OR10C1Q96KK4 312 aa11.78□□□□□ -0.52
COL9A1-207ENST00000486080 TMEM56Q96MV1 263 aa11.78□□□□□ -0.52
COL9A1-207ENST00000486080 ZNF251Q9BRH9 671 aa11.78□□□□□ -0.52
COL9A1-207ENST00000486080 MMP26Q9NRE1 261 aa11.78□□□□□ -0.52
COL9A1-207ENST00000486080 TMEM56-RWDD3S4R434 201 aa11.78□□□□□ -0.52
COL9A1-207ENST00000486080 C5orf51A6NDU8 294 aa11.77□□□□□ -0.52
COL9A1-207ENST00000486080 G3V3Q6 166 aa11.77□□□□□ -0.52
COL9A1-207ENST00000486080 J3QR06 171 aa11.77□□□□□ -0.52
COL9A1-207ENST00000486080 RAB29O14966 203 aa11.77□□□□□ -0.52
COL9A1-207ENST00000486080 RAMP3O60896 148 aa11.77□□□□□ -0.52
COL9A1-207ENST00000486080 CDS2O95674 445 aa11.77□□□□□ -0.52
COL9A1-207ENST00000486080 RBP4P02753 201 aa11.77□□□□□ -0.52
COL9A1-207ENST00000486080 DNASE1P24855 282 aa11.77□□□□□ -0.52
COL9A1-207ENST00000486080 DUTP33316 252 aaKnown RBP11.77□□□□□ -0.52
COL9A1-207ENST00000486080 DEFB113Q30KQ7 82 aa11.77□□□□□ -0.52
COL9A1-207ENST00000486080 C11orf91Q3C1V1 193 aa11.77□□□□□ -0.52
COL9A1-207ENST00000486080 ZNF585BQ52M93 769 aa11.77□□□□□ -0.52
COL9A1-207ENST00000486080 GGNBP1Q5YKI7 109 aa11.77□□□□□ -0.52
COL9A1-207ENST00000486080 SLC35G3Q8N808 338 aa11.77□□□□□ -0.52
COL9A1-207ENST00000486080 OR2T35Q8NGX2 323 aa11.77□□□□□ -0.52
COL9A1-207ENST00000486080 LPAR2Q9HBW0 351 aa11.77□□□□□ -0.52
COL9A1-207ENST00000486080 LIN7CQ9NUP9 197 aaKnown RBP11.77□□□□□ -0.52
COL9A1-207ENST00000486080 RNF212BA8MTL3 300 aa11.76□□□□□ -0.53
COL9A1-207ENST00000486080 A8MXK9 166 aa11.76□□□□□ -0.53
COL9A1-207ENST00000486080 IGKV1-39P01597 117 aa11.76□□□□□ -0.53
COL9A1-207ENST00000486080 IGKV1D-39P04432 117 aa11.76□□□□□ -0.53
COL9A1-207ENST00000486080 SERPINE2P07093 398 aa11.76□□□□□ -0.53
COL9A1-207ENST00000486080 EIF2B2P49770 351 aaKnown RBP11.76□□□□□ -0.53
COL9A1-207ENST00000486080 DSCR9P59020 149 aa11.76□□□□□ -0.53
COL9A1-207ENST00000486080 ZFP69Q49AA0 526 aa11.76□□□□□ -0.53
COL9A1-207ENST00000486080 NCR3LG1Q68D85 454 aa11.76□□□□□ -0.53
COL9A1-207ENST00000486080 GSG1LQ6UXU4 331 aa11.76□□□□□ -0.53
COL9A1-207ENST00000486080 ZNF66Q6ZN08 573 aa11.76□□□□□ -0.53
COL9A1-207ENST00000486080 ZNF695Q8IW36 515 aa11.76□□□□□ -0.53
COL9A1-207ENST00000486080 OR9G1Q8NH87 305 aa11.76□□□□□ -0.53
COL9A1-207ENST00000486080 RBMXL1Q96E39 390 aaKnown RBP11.76□□□□□ -0.53
COL9A1-207ENST00000486080 HSD17B10Q99714 261 aaKnown RBP11.76□□□□□ -0.53
COL9A1-207ENST00000486080 PDCD10Q9BUL8 212 aa11.76□□□□□ -0.53
COL9A1-207ENST00000486080 SIRT7Q9NRC8 400 aa11.76□□□□□ -0.53
COL9A1-207ENST00000486080 BEX4Q9NWD9 120 aaPredicted RBP11.76□□□□□ -0.53
COL9A1-207ENST00000486080 GAB2Q9UQC2 676 aa11.76□□□□□ -0.53
COL9A1-207ENST00000486080 UNC79Q9P2D8 2635 aa11.76□□□□□ -0.53
COL9A1-207ENST00000486080 IGHV2-26A0A0B4J1V2 119 aa11.76□□□□□ -0.53
COL9A1-207ENST00000486080 IGHV2-70DA0A0C4DH43 119 aa11.76□□□□□ -0.53
COL9A1-207ENST00000486080 ENSAO43768 121 aaKnown RBP11.76□□□□□ -0.53
COL9A1-207ENST00000486080 COX7A1P24310 79 aa11.76□□□□□ -0.53
COL9A1-207ENST00000486080 RAP2BP61225 183 aa11.76□□□□□ -0.53
COL9A1-207ENST00000486080 SRPXP78539 464 aa11.76□□□□□ -0.53
COL9A1-207ENST00000486080 LINC00311Q8N616 119 aa11.76□□□□□ -0.53
COL9A1-207ENST00000486080 C8orf31Q8N9H6 132 aa11.76□□□□□ -0.53
COL9A1-207ENST00000486080 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.76□□□□□ -0.53
COL9A1-207ENST00000486080 OR10X1Q8NGY0 326 aa11.76□□□□□ -0.53
COL9A1-207ENST00000486080 ZNF596Q8TC21 504 aa11.76□□□□□ -0.53
COL9A1-207ENST00000486080 FLNBO75369 2602 aaKnown RBP11.75□□□□□ -0.53
COL9A1-207ENST00000486080 hCG_1809904A0A1W2PP81 198 aa11.75□□□□□ -0.53
COL9A1-207ENST00000486080 A0A1W2PPE2 198 aa11.75□□□□□ -0.53
COL9A1-207ENST00000486080 A0A1W2PR64 198 aa11.75□□□□□ -0.53
COL9A1-207ENST00000486080 A0A1W2PRV1 198 aa11.75□□□□□ -0.53
COL9A1-207ENST00000486080 M0R1W7 72 aa11.75□□□□□ -0.53
COL9A1-207ENST00000486080 B3GALNT1O75752 331 aa11.75□□□□□ -0.53
COL9A1-207ENST00000486080 C1QBP02746 253 aa11.75□□□□□ -0.53
COL9A1-207ENST00000486080 LPAR6P43657 344 aa11.75□□□□□ -0.53
COL9A1-207ENST00000486080 SRSF4Q08170 494 aaKnown RBP11.75□□□□□ -0.53
COL9A1-207ENST00000486080 CATR1Q13166 79 aa11.75□□□□□ -0.53
COL9A1-207ENST00000486080 DIAPH2-AS1Q14236 149 aa11.75□□□□□ -0.53
COL9A1-207ENST00000486080 FAM219AQ8IW50 185 aa11.75□□□□□ -0.53
COL9A1-207ENST00000486080 SPAG16Q8N0X2 631 aa11.75□□□□□ -0.53
COL9A1-207ENST00000486080 OR11H4Q8NGC9 324 aa11.75□□□□□ -0.53
COL9A1-207ENST00000486080 RBPMSQ93062 196 aaKnown RBP11.75□□□□□ -0.53
COL9A1-207ENST00000486080 TOR1AO14656 332 aa11.74□□□□□ -0.53
COL9A1-207ENST00000486080 FOXH1O75593 365 aa11.74□□□□□ -0.53
COL9A1-207ENST00000486080 IFNA21P01568 189 aa11.74□□□□□ -0.53
COL9A1-207ENST00000486080 ZNF816Q0VGE8 651 aaPredicted RBP11.74□□□□□ -0.53
COL9A1-207ENST00000486080 ZNF833PQ6ZTB9 187 aa11.74□□□□□ -0.53
COL9A1-207ENST00000486080 PNKDQ8N490 385 aa11.74□□□□□ -0.53
COL9A1-207ENST00000486080 S1PR3Q99500 378 aa11.74□□□□□ -0.53
COL9A1-207ENST00000486080 CLEC7AQ9BXN2 247 aa11.74□□□□□ -0.53
COL9A1-207ENST00000486080 ITPR2Q14571 2701 aa11.74□□□□□ -0.53
COL9A1-207ENST00000486080 SETXQ7Z333 2677 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms