RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 GADD45AP24522 165 aa5.5□□□□□ -1.53
VPS50-218ENST00000485994 THBS3P49746 956 aa5.5□□□□□ -1.53
VPS50-218ENST00000485994 CLDN12P56749 244 aa5.5□□□□□ -1.53
VPS50-218ENST00000485994 ACTBP60709 375 aa5.5□□□□□ -1.53
VPS50-218ENST00000485994 RPL23AP62750 156 aaKnown RBP5.5□□□□□ -1.53
VPS50-218ENST00000485994 CFHR3Q02985 330 aa5.5□□□□□ -1.53
VPS50-218ENST00000485994 FOXE3Q13461 319 aa5.5□□□□□ -1.53
VPS50-218ENST00000485994 KIR2DS1Q14954 304 aa5.5□□□□□ -1.53
VPS50-218ENST00000485994 C5orf64Q2M2E5 130 aa5.5□□□□□ -1.53
VPS50-218ENST00000485994 KCTD21Q4G0X4 260 aa5.5□□□□□ -1.53
VPS50-218ENST00000485994 LCE4AQ5TA78 99 aa5.5□□□□□ -1.53
VPS50-218ENST00000485994 ZNF660Q6AZW8 331 aaPredicted RBP5.5□□□□□ -1.53
VPS50-218ENST00000485994 C22orf42Q6IC83 251 aa5.5□□□□□ -1.53
VPS50-218ENST00000485994 LIN54Q6MZP7 749 aa5.5□□□□□ -1.53
VPS50-218ENST00000485994 C10orf99Q6UWK7 81 aa5.5□□□□□ -1.53
VPS50-218ENST00000485994 NR2C2APQ86WQ0 139 aa5.5□□□□□ -1.53
VPS50-218ENST00000485994 MYOZ3Q8TDC0 251 aa5.5□□□□□ -1.53
VPS50-218ENST00000485994 IL1F10Q8WWZ1 152 aa5.5□□□□□ -1.53
VPS50-218ENST00000485994 RAB3CQ96E17 227 aa5.5□□□□□ -1.53
VPS50-218ENST00000485994 NOL4LQ96MY1 436 aaPredicted RBP5.5□□□□□ -1.53
VPS50-218ENST00000485994 P2RX4Q99571 388 aa5.5□□□□□ -1.53
VPS50-218ENST00000485994 CABLES2Q9BTV7 478 aa5.5□□□□□ -1.53
VPS50-218ENST00000485994 GPR61Q9BZJ8 451 aa5.5□□□□□ -1.53
VPS50-218ENST00000485994 DCSTAMPQ9H295 470 aa5.5□□□□□ -1.53
VPS50-218ENST00000485994 IFI27L2Q9H2X8 130 aa5.5□□□□□ -1.53
VPS50-218ENST00000485994 KCNK15Q9H427 330 aa5.5□□□□□ -1.53
VPS50-218ENST00000485994 STUB1Q9UNE7 303 aa5.5□□□□□ -1.53
VPS50-218ENST00000485994 SSR3Q9UNL2 185 aa5.5□□□□□ -1.53
VPS50-218ENST00000485994 NUBP2Q9Y5Y2 271 aa5.5□□□□□ -1.53
VPS50-218ENST00000485994 IGHV7-81A0A0B4J1V7 117 aa5.49□□□□□ -1.53
VPS50-218ENST00000485994 IGKV1-6A0A0C4DH72 117 aa5.49□□□□□ -1.53
VPS50-218ENST00000485994 H0YJW9 148 aa5.49□□□□□ -1.53
VPS50-218ENST00000485994 NBR2O15453 112 aa5.49□□□□□ -1.53
VPS50-218ENST00000485994 CD3GP09693 182 aa5.49□□□□□ -1.53
VPS50-218ENST00000485994 CTXN2P0C2S0 81 aa5.49□□□□□ -1.53
VPS50-218ENST00000485994 PF4V1P10720 104 aa5.49□□□□□ -1.53
VPS50-218ENST00000485994 HIST1H1DP16402 221 aaKnown RBP5.49□□□□□ -1.53
VPS50-218ENST00000485994 DTYMKP23919 212 aa5.49□□□□□ -1.53
VPS50-218ENST00000485994 PSMB8P28062 276 aa5.49□□□□□ -1.53
VPS50-218ENST00000485994 OR3A3P47888 321 aa5.49□□□□□ -1.53
VPS50-218ENST00000485994 LGALS7P47929 136 aa5.49□□□□□ -1.53
VPS50-218ENST00000485994 LUMP51884 338 aaPredicted RBP5.49□□□□□ -1.53
VPS50-218ENST00000485994 OR10A3P58181 314 aa5.49□□□□□ -1.53
VPS50-218ENST00000485994 MRPS15P82914 257 aaKnown RBP5.49□□□□□ -1.53
VPS50-218ENST00000485994 PITPNAQ00169 270 aa5.49□□□□□ -1.53
VPS50-218ENST00000485994 RUNX1Q01196 453 aa5.49□□□□□ -1.53
VPS50-218ENST00000485994 PLA2G7Q13093 441 aa5.49□□□□□ -1.53
VPS50-218ENST00000485994 MMDQ15546 238 aa5.49□□□□□ -1.53
VPS50-218ENST00000485994 CDNFQ49AH0 187 aa5.49□□□□□ -1.53
VPS50-218ENST00000485994 CXorf66Q5JRM2 361 aaPredicted RBP5.49□□□□□ -1.53
VPS50-218ENST00000485994 HES5Q5TA89 166 aa5.49□□□□□ -1.53
VPS50-218ENST00000485994 HIST2H2BDQ6DRA6 164 aa5.49□□□□□ -1.53
VPS50-218ENST00000485994 ZNF562Q6V9R5 426 aa5.49□□□□□ -1.53
VPS50-218ENST00000485994 ZNF329Q86UD4 541 aa5.49□□□□□ -1.53
VPS50-218ENST00000485994 ZNF695Q8IW36 515 aa5.49□□□□□ -1.53
VPS50-218ENST00000485994 TCTEX1D1Q8N7M0 179 aa5.49□□□□□ -1.53
VPS50-218ENST00000485994 LINC00482Q8N8I6 264 aa5.49□□□□□ -1.53
VPS50-218ENST00000485994 MINDY2Q8NBR6 621 aa5.49□□□□□ -1.53
VPS50-218ENST00000485994 RITA1Q96K30 269 aa5.49□□□□□ -1.53
VPS50-218ENST00000485994 KCTD7Q96MP8 289 aa5.49□□□□□ -1.53
VPS50-218ENST00000485994 HSPB9Q9BQS6 159 aa5.49□□□□□ -1.53
VPS50-218ENST00000485994 HDHD3Q9BSH5 251 aaPredicted RBP5.49□□□□□ -1.53
VPS50-218ENST00000485994 MCRIP2Q9BUT9 160 aaKnown RBP5.49□□□□□ -1.53
VPS50-218ENST00000485994 MRPL20Q9BYC9 149 aaKnown RBP5.49□□□□□ -1.53
VPS50-218ENST00000485994 OR51J1Q9H342 316 aa5.49□□□□□ -1.53
VPS50-218ENST00000485994 ZMAT5Q9UDW3 170 aaKnown RBP5.49□□□□□ -1.53
VPS50-218ENST00000485994 ZNF107Q9UII5 783 aaPredicted RBP5.49□□□□□ -1.53
VPS50-218ENST00000485994 ZNF221Q9UK13 617 aa5.49□□□□□ -1.53
VPS50-218ENST00000485994 A0A0A6YYH2 397 aa5.48□□□□□ -1.53
VPS50-218ENST00000485994 A6NJ64 397 aa5.48□□□□□ -1.53
VPS50-218ENST00000485994 RRHO14718 337 aa5.48□□□□□ -1.53
VPS50-218ENST00000485994 FABP7O15540 132 aa5.48□□□□□ -1.53
VPS50-218ENST00000485994 HSPA12AO43301 675 aa5.48□□□□□ -1.53
VPS50-218ENST00000485994 SLC22A5O76082 557 aa5.48□□□□□ -1.53
VPS50-218ENST00000485994 IGLV1-40P01703 118 aa5.48□□□□□ -1.53
VPS50-218ENST00000485994 PF4P02776 101 aa5.48□□□□□ -1.53
VPS50-218ENST00000485994 FCGR3AP08637 254 aa5.48□□□□□ -1.53
VPS50-218ENST00000485994 GSTP1P09211 210 aaKnown RBP5.48□□□□□ -1.53
VPS50-218ENST00000485994 GSTT2P0CG29 244 aa5.48□□□□□ -1.53
VPS50-218ENST00000485994 GSTT2BP0CG30 244 aa5.48□□□□□ -1.53
VPS50-218ENST00000485994 VDAC1P21796 283 aa5.48□□□□□ -1.53
VPS50-218ENST00000485994 PSMB9P28065 219 aa5.48□□□□□ -1.53
VPS50-218ENST00000485994 EGFEM1PQ0D2K5 195 aa5.48□□□□□ -1.53
VPS50-218ENST00000485994 TMEM267Q0VDI3 215 aaPredicted RBP5.48□□□□□ -1.53
VPS50-218ENST00000485994 KIAA0141Q14154 515 aaPredicted RBP5.48□□□□□ -1.53
VPS50-218ENST00000485994 MOGAT2Q3SYC2 334 aa5.48□□□□□ -1.53
VPS50-218ENST00000485994 ZNF260Q3ZCT1 412 aa5.48□□□□□ -1.53
VPS50-218ENST00000485994 AKIRIN2Q53H80 203 aa5.48□□□□□ -1.53
VPS50-218ENST00000485994 RPL39P5Q59GN2 51 aa5.48□□□□□ -1.53
VPS50-218ENST00000485994 C19orf54Q5BKX5 351 aa5.48□□□□□ -1.53
VPS50-218ENST00000485994 HACD4Q5VWC8 232 aa5.48□□□□□ -1.53
VPS50-218ENST00000485994 ETV3LQ6ZN32 361 aa5.48□□□□□ -1.53
VPS50-218ENST00000485994 PDPNQ86YL7 162 aa5.48□□□□□ -1.53
VPS50-218ENST00000485994 CROCCP3Q8IVE0 287 aa5.48□□□□□ -1.53
VPS50-218ENST00000485994 MRPL41Q8IXM3 137 aaKnown RBP5.48□□□□□ -1.53
VPS50-218ENST00000485994 OR10J5Q8NHC4 309 aa5.48□□□□□ -1.53
VPS50-218ENST00000485994 ABHD14BQ96IU4 210 aa5.48□□□□□ -1.53
VPS50-218ENST00000485994 UBE2E2Q96LR5 201 aa5.48□□□□□ -1.53
VPS50-218ENST00000485994 TMEM68Q96MH6 324 aa5.48□□□□□ -1.53
VPS50-218ENST00000485994 NECAP2Q9NVZ3 263 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms