RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 IGLV2-14P01704 120 aa4.51□□□□□ -1.69
CUX1-208ENST00000485792 FCGR3AP08637 254 aa4.51□□□□□ -1.69
CUX1-208ENST00000485792 SCTP09683 121 aa4.51□□□□□ -1.69
CUX1-208ENST00000485792 FAM106CPP0CH98 169 aa4.51□□□□□ -1.69
CUX1-208ENST00000485792 CT45A6P0DMU7 189 aa4.51□□□□□ -1.69
CUX1-208ENST00000485792 CT45A5P0DMU8 189 aa4.51□□□□□ -1.69
CUX1-208ENST00000485792 CT45A7P0DMV0 189 aa4.51□□□□□ -1.69
CUX1-208ENST00000485792 CNTFRP26992 372 aa4.51□□□□□ -1.69
CUX1-208ENST00000485792 PPP1CCP36873 323 aaKnown RBP4.51□□□□□ -1.69
CUX1-208ENST00000485792 MNDAP41218 407 aa4.51□□□□□ -1.69
CUX1-208ENST00000485792 REG1BP48304 166 aa4.51□□□□□ -1.69
CUX1-208ENST00000485792 ARHGDIBP52566 201 aa4.51□□□□□ -1.69
CUX1-208ENST00000485792 CRIP2P52943 208 aaPredicted RBP4.51□□□□□ -1.69
CUX1-208ENST00000485792 HLA-DRB3P79483 266 aa4.51□□□□□ -1.69
CUX1-208ENST00000485792 NDPQ00604 133 aa4.51□□□□□ -1.69
CUX1-208ENST00000485792 CFHR3Q02985 330 aa4.51□□□□□ -1.69
CUX1-208ENST00000485792 ARL6IP1Q15041 203 aa4.51□□□□□ -1.69
CUX1-208ENST00000485792 NEDD8Q15843 81 aa4.51□□□□□ -1.69
CUX1-208ENST00000485792 C21orf62-AS1Q17RA5 79 aa4.51□□□□□ -1.69
CUX1-208ENST00000485792 PNLIPRP3Q17RR3 467 aa4.51□□□□□ -1.69
CUX1-208ENST00000485792 TIMM50Q3ZCQ8 353 aa4.51□□□□□ -1.69
CUX1-208ENST00000485792 C19orf54Q5BKX5 351 aa4.51□□□□□ -1.69
CUX1-208ENST00000485792 HACD4Q5VWC8 232 aa4.51□□□□□ -1.69
CUX1-208ENST00000485792 C18orf65Q6ZTR6 163 aa4.51□□□□□ -1.69
CUX1-208ENST00000485792 ANKRD13BQ86YJ7 626 aa4.51□□□□□ -1.69
CUX1-208ENST00000485792 CROCCP3Q8IVE0 287 aa4.51□□□□□ -1.69
CUX1-208ENST00000485792 LYG1Q8N1E2 194 aa4.51□□□□□ -1.69
CUX1-208ENST00000485792 NPBQ8NG41 125 aa4.51□□□□□ -1.69
CUX1-208ENST00000485792 OR10V1Q8NGI7 309 aa4.51□□□□□ -1.69
CUX1-208ENST00000485792 OR10X1Q8NGY0 326 aa4.51□□□□□ -1.69
CUX1-208ENST00000485792 OR56B4Q8NH76 319 aa4.51□□□□□ -1.69
CUX1-208ENST00000485792 OR2T6Q8NHC8 308 aa4.51□□□□□ -1.69
CUX1-208ENST00000485792 NEK7Q8TDX7 302 aa4.51□□□□□ -1.69
CUX1-208ENST00000485792 MAFIPQ8WZ33 124 aa4.51□□□□□ -1.69
CUX1-208ENST00000485792 SLC25A46Q96AG3 418 aa4.51□□□□□ -1.69
CUX1-208ENST00000485792 CMTM3Q96MX0 182 aa4.51□□□□□ -1.69
CUX1-208ENST00000485792 NABP2Q9BQ15 211 aa4.51□□□□□ -1.69
CUX1-208ENST00000485792 CMSS1Q9BQ75 279 aaKnown RBP4.51□□□□□ -1.69
CUX1-208ENST00000485792 CHCHD6Q9BRQ6 235 aa4.51□□□□□ -1.69
CUX1-208ENST00000485792 SLC25A33Q9BSK2 321 aa4.51□□□□□ -1.69
CUX1-208ENST00000485792 ABHD14AQ9BUJ0 271 aa4.51□□□□□ -1.69
CUX1-208ENST00000485792 C11orf54Q9H0W9 315 aaPredicted RBP4.51□□□□□ -1.69
CUX1-208ENST00000485792 KCNIP1Q9NZI2 227 aa4.51□□□□□ -1.69
CUX1-208ENST00000485792 ABRACLQ9P1F3 81 aa4.51□□□□□ -1.69
CUX1-208ENST00000485792 SPATA2Q9UM82 520 aa4.51□□□□□ -1.69
CUX1-208ENST00000485792 MOB4Q9Y3A3 225 aa4.51□□□□□ -1.69
CUX1-208ENST00000485792 SAA2-SAA4A0A096LPE2 208 aa4.5□□□□□ -1.69
CUX1-208ENST00000485792 IGHV3-72A0A0B4J1Y9 119 aa4.5□□□□□ -1.69
CUX1-208ENST00000485792 ZNF561-AS1K7EIQ3 104 aa4.5□□□□□ -1.69
CUX1-208ENST00000485792 RAB29O14966 203 aa4.5□□□□□ -1.69
CUX1-208ENST00000485792 AIREO43918 545 aa4.5□□□□□ -1.69
CUX1-208ENST00000485792 TUSC2O75896 110 aa4.5□□□□□ -1.69
CUX1-208ENST00000485792 GABARAPO95166 117 aa4.5□□□□□ -1.69
CUX1-208ENST00000485792 MOSP00540 346 aa4.5□□□□□ -1.69
CUX1-208ENST00000485792 IGKV1D-33P01593 117 aa4.5□□□□□ -1.69
CUX1-208ENST00000485792 IGKV1-33P01594 117 aa4.5□□□□□ -1.69
CUX1-208ENST00000485792 IGF1P05019 195 aa4.5□□□□□ -1.69
CUX1-208ENST00000485792 SAA2P0DJI9 122 aaPredicted RBP4.5□□□□□ -1.69
CUX1-208ENST00000485792 MED14OSP0DP75 135 aa4.5□□□□□ -1.69
CUX1-208ENST00000485792 GNB3P16520 340 aa4.5□□□□□ -1.69
CUX1-208ENST00000485792 ZBTB25P24278 435 aa4.5□□□□□ -1.69
CUX1-208ENST00000485792 PPIFP30405 207 aaKnown RBP4.5□□□□□ -1.69
CUX1-208ENST00000485792 OR3A3P47888 321 aa4.5□□□□□ -1.69
CUX1-208ENST00000485792 SERPINB10P48595 397 aa4.5□□□□□ -1.69
CUX1-208ENST00000485792 F2RL1P55085 397 aa4.5□□□□□ -1.69
CUX1-208ENST00000485792 PITPNAQ00169 270 aa4.5□□□□□ -1.69
CUX1-208ENST00000485792 EIF4EBP1Q13541 118 aaPredicted RBP4.5□□□□□ -1.69
CUX1-208ENST00000485792 KIR2DS1Q14954 304 aa4.5□□□□□ -1.69
CUX1-208ENST00000485792 CDNFQ49AH0 187 aa4.5□□□□□ -1.69
CUX1-208ENST00000485792 TM4SF20Q53R12 229 aa4.5□□□□□ -1.69
CUX1-208ENST00000485792 IGSF11Q5DX21 431 aa4.5□□□□□ -1.69
CUX1-208ENST00000485792 ETV3LQ6ZN32 361 aa4.5□□□□□ -1.69
CUX1-208ENST00000485792 H1FOOQ8IZA3 346 aaPredicted RBP4.5□□□□□ -1.69
CUX1-208ENST00000485792 KLHDC1Q8N7A1 406 aa4.5□□□□□ -1.69
CUX1-208ENST00000485792 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.5□□□□□ -1.69
CUX1-208ENST00000485792 WFDC9Q8NEX5 89 aa4.5□□□□□ -1.69
CUX1-208ENST00000485792 OR2T10Q8NGZ9 312 aa4.5□□□□□ -1.69
CUX1-208ENST00000485792 LGALS14Q8TCE9 139 aa4.5□□□□□ -1.69
CUX1-208ENST00000485792 MYOZ3Q8TDC0 251 aa4.5□□□□□ -1.69
CUX1-208ENST00000485792 DDB2Q92466 427 aa4.5□□□□□ -1.69
CUX1-208ENST00000485792 AKR1E2Q96JD6 320 aa4.5□□□□□ -1.69
CUX1-208ENST00000485792 S1PR3Q99500 378 aa4.5□□□□□ -1.69
CUX1-208ENST00000485792 RNF5Q99942 180 aa4.5□□□□□ -1.69
CUX1-208ENST00000485792 HSPB9Q9BQS6 159 aa4.5□□□□□ -1.69
CUX1-208ENST00000485792 FUNDC2Q9BWH2 189 aa4.5□□□□□ -1.69
CUX1-208ENST00000485792 ABCB10Q9NRK6 738 aa4.5□□□□□ -1.69
CUX1-208ENST00000485792 LIN7CQ9NUP9 197 aaKnown RBP4.5□□□□□ -1.69
CUX1-208ENST00000485792 RHBDL2Q9NX52 303 aa4.5□□□□□ -1.69
CUX1-208ENST00000485792 PIPOXQ9P0Z9 390 aa4.5□□□□□ -1.69
CUX1-208ENST00000485792 GNG12Q9UBI6 72 aa4.5□□□□□ -1.69
CUX1-208ENST00000485792 DAPK2Q9UIK4 370 aa4.5□□□□□ -1.69
CUX1-208ENST00000485792 FBXO7Q9Y3I1 522 aa4.5□□□□□ -1.69
CUX1-208ENST00000485792 OR5H14A6NHG9 310 aa4.49□□□□□ -1.69
CUX1-208ENST00000485792 H0YJW9 148 aa4.49□□□□□ -1.69
CUX1-208ENST00000485792 FABP7O15540 132 aa4.49□□□□□ -1.69
CUX1-208ENST00000485792 XRCC3O43542 346 aa4.49□□□□□ -1.69
CUX1-208ENST00000485792 TPPPO94811 219 aa4.49□□□□□ -1.69
CUX1-208ENST00000485792 HLA-DRB1P01911 266 aa4.49□□□□□ -1.69
CUX1-208ENST00000485792 HLA-DQB1P01920 261 aa4.49□□□□□ -1.69
CUX1-208ENST00000485792 CRYGBP07316 175 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms