RNA–Protein interactions for RNA: ENST00000484822.1

RXRA-203, Transcript of retinoid X receptor alpha, humanhuman

TSL 2

Gene RXRA, Length 5,215 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-203ENST00000484822 RBM11P57052 281 aaKnown RBP13.1□□□□□ -0.31
RXRA-203ENST00000484822 SOX8P57073 446 aa13.1□□□□□ -0.31
RXRA-203ENST00000484822 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.1□□□□□ -0.31
RXRA-203ENST00000484822 PRNTQ86SH4 94 aa13.1□□□□□ -0.31
RXRA-203ENST00000484822 SLC22A18ASQ8N1D0 253 aa13.1□□□□□ -0.31
RXRA-203ENST00000484822 OR52M1Q8NGK5 317 aa13.1□□□□□ -0.31
RXRA-203ENST00000484822 C5orf66Q9H5L9 145 aa13.1□□□□□ -0.31
RXRA-203ENST00000484822 WDR54Q9H977 334 aa13.1□□□□□ -0.31
RXRA-203ENST00000484822 PRNDQ9UKY0 176 aa13.1□□□□□ -0.31
RXRA-203ENST00000484822 A8MWL6 223 aa13.1□□□□□ -0.31
RXRA-203ENST00000484822 DANCRP0C864 163 aa13.1□□□□□ -0.31
RXRA-203ENST00000484822 FXYD3Q14802 87 aa13.1□□□□□ -0.31
RXRA-203ENST00000484822 SNRNP40Q96DI7 357 aaKnown RBP13.1□□□□□ -0.31
RXRA-203ENST00000484822 ZNF256Q9Y2P7 627 aaPredicted RBP13.1□□□□□ -0.31
RXRA-203ENST00000484822 TRAV38-1A0A0B4J264 116 aa13.1□□□□□ -0.31
RXRA-203ENST00000484822 MGPP08493 103 aa13.1□□□□□ -0.31
RXRA-203ENST00000484822 GZMHP20718 246 aa13.1□□□□□ -0.31
RXRA-203ENST00000484822 FAM181AQ8N9Y4 354 aa13.1□□□□□ -0.31
RXRA-203ENST00000484822 STXBP6Q8NFX7 210 aa13.1□□□□□ -0.31
RXRA-203ENST00000484822 OR10S1Q8NGN2 331 aa13.1□□□□□ -0.31
RXRA-203ENST00000484822 TAF15Q92804 592 aaKnown RBP eCLIP13.1□□□□□ -0.31
RXRA-203ENST00000484822 HARBI1Q96MB7 349 aa13.1□□□□□ -0.31
RXRA-203ENST00000484822 RASL11BQ9BPW5 248 aa13.1□□□□□ -0.31
RXRA-203ENST00000484822 PAXXQ9BUH6 204 aa13.1□□□□□ -0.31
RXRA-203ENST00000484822 ZNF236Q9UL36 1845 aa13.1□□□□□ -0.31
RXRA-203ENST00000484822 MYO16Q9Y6X6 1858 aa13.1□□□□□ -0.31
RXRA-203ENST00000484822 CACNA1IQ9P0X4 2223 aa13.1□□□□□ -0.31
RXRA-203ENST00000484822 J3QR06 171 aa13.09□□□□□ -0.31
RXRA-203ENST00000484822 SYNGR1O43759 233 aa13.09□□□□□ -0.31
RXRA-203ENST00000484822 CD74P04233 296 aa13.09□□□□□ -0.31
RXRA-203ENST00000484822 ASCL3Q9NQ33 180 aa13.09□□□□□ -0.31
RXRA-203ENST00000484822 IL36RNQ9UBH0 155 aa13.09□□□□□ -0.31
RXRA-203ENST00000484822 A8MXK9 166 aa13.09□□□□□ -0.31
RXRA-203ENST00000484822 TMPRSS2O15393 492 aa13.09□□□□□ -0.31
RXRA-203ENST00000484822 PRRX1P54821 245 aa13.09□□□□□ -0.31
RXRA-203ENST00000484822 GBGT1Q8N5D6 347 aa13.09□□□□□ -0.31
RXRA-203ENST00000484822 NUDT16L1Q9BRJ7 211 aaKnown RBP13.09□□□□□ -0.31
RXRA-203ENST00000484822 NPVFQ9HCQ7 196 aa13.09□□□□□ -0.31
RXRA-203ENST00000484822 SNRNP200O75643 2136 aaKnown RBP13.09□□□□□ -0.31
RXRA-203ENST00000484822 DICER1Q9UPY3 1922 aaKnown RBP13.09□□□□□ -0.31
RXRA-203ENST00000484822 A0A1W2PPE3 182 aa13.09□□□□□ -0.31
RXRA-203ENST00000484822 IGKV1D-16P01601 117 aa13.09□□□□□ -0.31
RXRA-203ENST00000484822 TUSC5Q8IXB3 177 aa13.09□□□□□ -0.31
RXRA-203ENST00000484822 OR1N2Q8NGR9 330 aa13.09□□□□□ -0.31
RXRA-203ENST00000484822 GMPPAQ96IJ6 420 aaPredicted RBP13.09□□□□□ -0.31
RXRA-203ENST00000484822 P2RX4Q99571 388 aa13.09□□□□□ -0.31
RXRA-203ENST00000484822 RBKSQ9H477 322 aa13.09□□□□□ -0.31
RXRA-203ENST00000484822 UBTD1Q9HAC8 227 aa13.09□□□□□ -0.31
RXRA-203ENST00000484822 RTTNQ86VV8 2226 aa13.09□□□□□ -0.31
RXRA-203ENST00000484822 SHISA3A0PJX4 238 aa13.09□□□□□ -0.31
RXRA-203ENST00000484822 UPK3AO75631 287 aa13.09□□□□□ -0.31
RXRA-203ENST00000484822 SP9P0CG40 484 aa13.09□□□□□ -0.31
RXRA-203ENST00000484822 ERGP11308 486 aa13.09□□□□□ -0.31
RXRA-203ENST00000484822 ERVFRD-1P60508 538 aa13.09□□□□□ -0.31
RXRA-203ENST00000484822 FHL5Q5TD97 284 aa13.09□□□□□ -0.31
RXRA-203ENST00000484822 BHLHA15Q7RTS1 189 aaPredicted RBP13.09□□□□□ -0.31
RXRA-203ENST00000484822 ZBTB34Q8NCN2 500 aa13.09□□□□□ -0.31
RXRA-203ENST00000484822 SCTP09683 121 aa13.08□□□□□ -0.31
RXRA-203ENST00000484822 CLDN18P56856 261 aa13.08□□□□□ -0.31
RXRA-203ENST00000484822 ZDHHC8Q9ULC8 765 aa13.08□□□□□ -0.31
RXRA-203ENST00000484822 PQLC2Q6ZP29 291 aa13.08□□□□□ -0.32
RXRA-203ENST00000484822 ZNF441Q8N8Z8 693 aa13.08□□□□□ -0.32
RXRA-203ENST00000484822 IGKV3-7A0A075B6H7 116 aa13.08□□□□□ -0.32
RXRA-203ENST00000484822 PRF1P14222 555 aa13.08□□□□□ -0.32
RXRA-203ENST00000484822 TMEM183AQ8IXX5 376 aa13.08□□□□□ -0.32
RXRA-203ENST00000484822 TPRX1Q8N7U7 411 aa13.08□□□□□ -0.32
RXRA-203ENST00000484822 ZCCHC14Q8WYQ9 949 aaKnown RBP13.08□□□□□ -0.32
RXRA-203ENST00000484822 AQP3Q92482 292 aa13.08□□□□□ -0.32
RXRA-203ENST00000484822 ZNF729A6NN14 1252 aaPredicted RBP13.07□□□□□ -0.32
RXRA-203ENST00000484822 DHRS7CA6NNS2 312 aa13.07□□□□□ -0.32
RXRA-203ENST00000484822 ZNF788Q6ZQV5 615 aa13.07□□□□□ -0.32
RXRA-203ENST00000484822 DNASE2BQ8WZ79 361 aa13.07□□□□□ -0.32
RXRA-203ENST00000484822 OR8B2Q96RD0 313 aa13.07□□□□□ -0.32
RXRA-203ENST00000484822 KCNMB2Q9Y691 235 aa13.07□□□□□ -0.32
RXRA-203ENST00000484822 SPTA1P02549 2419 aa13.07□□□□□ -0.32
RXRA-203ENST00000484822 DNASE2O00115 360 aaPredicted RBP13.07□□□□□ -0.32
RXRA-203ENST00000484822 ASAH2BP0C7U1 165 aa13.07□□□□□ -0.32
RXRA-203ENST00000484822 FUT5Q11128 374 aa13.07□□□□□ -0.32
RXRA-203ENST00000484822 ZNF385AQ96PM9 386 aaKnown RBP13.07□□□□□ -0.32
RXRA-203ENST00000484822 SF3B5Q9BWJ5 86 aaKnown RBP13.07□□□□□ -0.32
RXRA-203ENST00000484822 CISD1Q9NZ45 108 aaKnown RBP13.07□□□□□ -0.32
RXRA-203ENST00000484822 F11RQ9Y624 299 aaKnown RBP13.07□□□□□ -0.32
RXRA-203ENST00000484822 PLAUP00749 431 aa13.07□□□□□ -0.32
RXRA-203ENST00000484822 MIC13Q5XKP0 118 aa13.07□□□□□ -0.32
RXRA-203ENST00000484822 CRIPAKQ8N1N5 446 aa13.07□□□□□ -0.32
RXRA-203ENST00000484822 GRAMD2BQ96HH9 432 aa13.07□□□□□ -0.32
RXRA-203ENST00000484822 CDC42EP3Q9UKI2 254 aa13.07□□□□□ -0.32
RXRA-203ENST00000484822 TET1Q8NFU7 2136 aa13.07□□□□□ -0.32
RXRA-203ENST00000484822 H0Y980 276 aa13.07□□□□□ -0.32
RXRA-203ENST00000484822 BTF3P20290 206 aaKnown RBP13.07□□□□□ -0.32
RXRA-203ENST00000484822 CSRP3P50461 194 aa13.07□□□□□ -0.32
RXRA-203ENST00000484822 C3AR1Q16581 482 aa13.07□□□□□ -0.32
RXRA-203ENST00000484822 PRSS53Q2L4Q9 553 aa13.07□□□□□ -0.32
RXRA-203ENST00000484822 FOXS1O43638 330 aa13.06□□□□□ -0.32
RXRA-203ENST00000484822 KBTBD11O94819 623 aa13.06□□□□□ -0.32
RXRA-203ENST00000484822 OR4A8P0C604 315 aa13.06□□□□□ -0.32
RXRA-203ENST00000484822 FOLR2P14207 255 aa13.06□□□□□ -0.32
RXRA-203ENST00000484822 EGR1P18146 543 aa13.06□□□□□ -0.32
RXRA-203ENST00000484822 HERPUD1Q15011 391 aa13.06□□□□□ -0.32
RXRA-203ENST00000484822 DNLZQ5SXM8 178 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms