RNA–Protein interactions for RNA: ENST00000484556.1

DDR1-245, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 1,038 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-245ENST00000484556 OR52I1Q8NGK6 324 aa13.33□□□□□ -0.28
DDR1-245ENST00000484556 C2CD4CQ8TF44 421 aa13.33□□□□□ -0.28
DDR1-245ENST00000484556 CYYR1Q96J86 154 aa13.33□□□□□ -0.28
DDR1-245ENST00000484556 PDCD1LG2Q9BQ51 273 aa13.33□□□□□ -0.28
DDR1-245ENST00000484556 TAF9BQ9HBM6 251 aa13.33□□□□□ -0.28
DDR1-245ENST00000484556 MBNL3Q9NUK0 354 aaKnown RBP13.33□□□□□ -0.28
DDR1-245ENST00000484556 APLNQ9ULZ1 77 aa13.33□□□□□ -0.28
DDR1-245ENST00000484556 LOC100130705A0A1B0GUX0 176 aa13.32□□□□□ -0.28
DDR1-245ENST00000484556 EBAG9O00559 213 aa13.32□□□□□ -0.28
DDR1-245ENST00000484556 SLC22A1O15245 554 aa13.32□□□□□ -0.28
DDR1-245ENST00000484556 IFNA4P05014 189 aa13.32□□□□□ -0.28
DDR1-245ENST00000484556 CT45A6P0DMU7 189 aa13.32□□□□□ -0.28
DDR1-245ENST00000484556 CT45A5P0DMU8 189 aa13.32□□□□□ -0.28
DDR1-245ENST00000484556 CT45A7P0DMV0 189 aa13.32□□□□□ -0.28
DDR1-245ENST00000484556 SERPINA2P20848 420 aa13.32□□□□□ -0.28
DDR1-245ENST00000484556 APOC4P55056 127 aa13.32□□□□□ -0.28
DDR1-245ENST00000484556 SSBP2P81877 361 aaPredicted RBP13.32□□□□□ -0.28
DDR1-245ENST00000484556 RPL39P5Q59GN2 51 aa13.32□□□□□ -0.28
DDR1-245ENST00000484556 NHLRC3Q5JS37 347 aa13.32□□□□□ -0.28
DDR1-245ENST00000484556 MAPKAPK5-AS1Q8N8E1 139 aa13.32□□□□□ -0.28
DDR1-245ENST00000484556 OR5D14Q8NGL3 314 aa13.32□□□□□ -0.28
DDR1-245ENST00000484556 OR5AK2Q8NH90 309 aa13.32□□□□□ -0.28
DDR1-245ENST00000484556 APH1BQ8WW43 257 aa13.32□□□□□ -0.28
DDR1-245ENST00000484556 MRPL48Q96GC5 212 aaKnown RBP13.32□□□□□ -0.28
DDR1-245ENST00000484556 C9orf16Q9BUW7 83 aa13.32□□□□□ -0.28
DDR1-245ENST00000484556 IFI27L2Q9H2X8 130 aa13.32□□□□□ -0.28
DDR1-245ENST00000484556 MRPS18AQ9NVS2 196 aaKnown RBP13.32□□□□□ -0.28
DDR1-245ENST00000484556 COA4Q9NYJ1 87 aa13.32□□□□□ -0.28
DDR1-245ENST00000484556 A0A1W2PP11 408 aa13.31□□□□□ -0.28
DDR1-245ENST00000484556 TMEM212A6NML5 194 aa13.31□□□□□ -0.28
DDR1-245ENST00000484556 H0YJW9 148 aa13.31□□□□□ -0.28
DDR1-245ENST00000484556 SCAF4O95104 1147 aaKnown RBP13.31□□□□□ -0.28
DDR1-245ENST00000484556 APELAP0DMC3 54 aa13.31□□□□□ -0.28
DDR1-245ENST00000484556 GTF2A1P52655 376 aaPredicted RBP13.31□□□□□ -0.28
DDR1-245ENST00000484556 TM4SF20Q53R12 229 aa13.31□□□□□ -0.28
DDR1-245ENST00000484556 ASCL4Q6XD76 172 aa13.31□□□□□ -0.28
DDR1-245ENST00000484556 C10orf67Q8IYJ2 551 aa13.31□□□□□ -0.28
DDR1-245ENST00000484556 FBLIM1Q8WUP2 373 aa13.31□□□□□ -0.28
DDR1-245ENST00000484556 GHSRQ92847 366 aa13.31□□□□□ -0.28
DDR1-245ENST00000484556 Q96MT0 163 aa13.31□□□□□ -0.28
DDR1-245ENST00000484556 S100A14Q9HCY8 104 aa13.31□□□□□ -0.28
DDR1-245ENST00000484556 TECRQ9NZ01 308 aaKnown RBP13.31□□□□□ -0.28
DDR1-245ENST00000484556 JPT1Q9UK76 154 aa13.31□□□□□ -0.28
DDR1-245ENST00000484556 LRP1BQ9NZR2 4599 aa13.31□□□□□ -0.28
DDR1-245ENST00000484556 OR5H14A6NHG9 310 aa13.3□□□□□ -0.28
DDR1-245ENST00000484556 ST8SIA5O15466 376 aa13.3□□□□□ -0.28
DDR1-245ENST00000484556 LIMS3P0CW19 117 aa13.3□□□□□ -0.28
DDR1-245ENST00000484556 LIMS4P0CW20 117 aa13.3□□□□□ -0.28
DDR1-245ENST00000484556 SMN1Q16637 294 aaKnown RBP13.3□□□□□ -0.28
DDR1-245ENST00000484556 MPV17LQ2QL34 196 aa13.3□□□□□ -0.28
DDR1-245ENST00000484556 XAF1Q6GPH4 301 aa13.3□□□□□ -0.28
DDR1-245ENST00000484556 LINC00596Q86U02 117 aa13.3□□□□□ -0.28
DDR1-245ENST00000484556 CPNE2Q96FN4 548 aaPredicted RBP13.3□□□□□ -0.28
DDR1-245ENST00000484556 USMG5Q96IX5 58 aa13.3□□□□□ -0.28
DDR1-245ENST00000484556 WASHC3Q9Y3C0 194 aa13.3□□□□□ -0.28
DDR1-245ENST00000484556 IGLL5B9A064 214 aa13.29□□□□□ -0.28
DDR1-245ENST00000484556 LGALS7P47929 136 aa13.29□□□□□ -0.28
DDR1-245ENST00000484556 GBX2P52951 348 aaPredicted RBP13.29□□□□□ -0.28
DDR1-245ENST00000484556 RIPK1Q13546 671 aa13.29□□□□□ -0.28
DDR1-245ENST00000484556 EXOSC2Q13868 293 aaKnown RBP13.29□□□□□ -0.28
DDR1-245ENST00000484556 ZNF529Q6P280 563 aa13.29□□□□□ -0.28
DDR1-245ENST00000484556 PQLC1Q8N2U9 271 aa13.29□□□□□ -0.28
DDR1-245ENST00000484556 OR2AK2Q8NG84 335 aa13.29□□□□□ -0.28
DDR1-245ENST00000484556 C11orf45Q8TAV5 145 aa13.29□□□□□ -0.28
DDR1-245ENST00000484556 TSEN15Q8WW01 171 aaKnown RBP13.29□□□□□ -0.28
DDR1-245ENST00000484556 MYCBPQ99417 103 aaPredicted RBP13.29□□□□□ -0.28
DDR1-245ENST00000484556 METTL9Q9H1A3 318 aa13.29□□□□□ -0.28
DDR1-245ENST00000484556 RPL36Q9Y3U8 105 aaKnown RBP13.29□□□□□ -0.28
DDR1-245ENST00000484556 WBP4O75554 376 aaKnown RBP13.28□□□□□ -0.28
DDR1-245ENST00000484556 RBBP9O75884 186 aa13.28□□□□□ -0.28
DDR1-245ENST00000484556 HLA-AP01891 365 aaKnown RBP13.28□□□□□ -0.28
DDR1-245ENST00000484556 MAS1P04201 325 aa13.28□□□□□ -0.28
DDR1-245ENST00000484556 RAB3AP20336 220 aa13.28□□□□□ -0.28
DDR1-245ENST00000484556 SOX2P48431 317 aa13.28□□□□□ -0.28
DDR1-245ENST00000484556 ETV1P50549 477 aa13.28□□□□□ -0.28
DDR1-245ENST00000484556 TCTAP57738 103 aa13.28□□□□□ -0.28
DDR1-245ENST00000484556 PJVKQ0ZLH3 352 aa13.28□□□□□ -0.28
DDR1-245ENST00000484556 MRPL28Q13084 256 aaKnown RBP13.28□□□□□ -0.28
DDR1-245ENST00000484556 ZNF57Q68EA5 555 aaPredicted RBP13.28□□□□□ -0.28
DDR1-245ENST00000484556 TRAT1Q6PIZ9 186 aa13.28□□□□□ -0.28
DDR1-245ENST00000484556 KCNG3Q8TAE7 436 aa13.28□□□□□ -0.28
DDR1-245ENST00000484556 MFFQ9GZY8 342 aa13.28□□□□□ -0.28
DDR1-245ENST00000484556 FGF20Q9NP95 211 aaPredicted RBP13.28□□□□□ -0.28
DDR1-245ENST00000484556 TAS2R4Q9NYW5 299 aa13.28□□□□□ -0.28
DDR1-245ENST00000484556 MLXQ9UH92 298 aa13.28□□□□□ -0.28
DDR1-245ENST00000484556 UBQLN2Q9UHD9 624 aa13.28□□□□□ -0.28
DDR1-245ENST00000484556 FAM90A23PA8MXZ1 464 aa13.27□□□□□ -0.29
DDR1-245ENST00000484556 MCRIP1C9JLW8 97 aa13.27□□□□□ -0.29
DDR1-245ENST00000484556 PPP5D1E7EU14 171 aa13.27□□□□□ -0.29
DDR1-245ENST00000484556 M0R2N4 97 aa13.27□□□□□ -0.29
DDR1-245ENST00000484556 YPEL1O60688 119 aa13.27□□□□□ -0.29
DDR1-245ENST00000484556 RPSAP08865 295 aaKnown RBP13.27□□□□□ -0.29
DDR1-245ENST00000484556 FCGR2BP31994 310 aaPredicted RBP13.27□□□□□ -0.29
DDR1-245ENST00000484556 C6orf141Q5SZD1 244 aa13.27□□□□□ -0.29
DDR1-245ENST00000484556 DMKNQ6E0U4 476 aaPredicted RBP13.27□□□□□ -0.29
DDR1-245ENST00000484556 FAM71F2Q6NXP2 309 aa13.27□□□□□ -0.29
DDR1-245ENST00000484556 STPG3Q8N7X2 389 aa13.27□□□□□ -0.29
DDR1-245ENST00000484556 YPEL2Q96QA6 119 aa13.27□□□□□ -0.29
DDR1-245ENST00000484556 JAM3Q9BX67 310 aa13.27□□□□□ -0.29
DDR1-245ENST00000484556 IL36GQ9NZH8 169 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms