RNA–Protein interactions for RNA: ENST00000483764.5

MRPL28-210, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,512 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-210ENST00000483764 RNF212BA8MTL3 300 aa14.23□□□□□ -0.13
MRPL28-210ENST00000483764 ADAM20O43506 726 aa14.23□□□□□ -0.13
MRPL28-210ENST00000483764 IGHV4-39P01824 125 aa14.23□□□□□ -0.13
MRPL28-210ENST00000483764 SCTP09683 121 aa14.23□□□□□ -0.13
MRPL28-210ENST00000483764 NKX2-1P43699 371 aaPredicted RBP14.23□□□□□ -0.13
MRPL28-210ENST00000483764 BAXQ07812 192 aa14.23□□□□□ -0.13
MRPL28-210ENST00000483764 ZNF266Q14584 549 aa14.23□□□□□ -0.13
MRPL28-210ENST00000483764 KRBOX4Q5JUW0 171 aa14.23□□□□□ -0.13
MRPL28-210ENST00000483764 AVPI1Q5T686 147 aa14.23□□□□□ -0.13
MRPL28-210ENST00000483764 RPL7L1Q6DKI1 246 aaKnown RBP14.23□□□□□ -0.13
MRPL28-210ENST00000483764 LYPD2Q6UXB3 125 aa14.23□□□□□ -0.13
MRPL28-210ENST00000483764 ZBTB34Q8NCN2 500 aa14.23□□□□□ -0.13
MRPL28-210ENST00000483764 NRGNQ92686 78 aa14.23□□□□□ -0.13
MRPL28-210ENST00000483764 TP53RKQ96S44 253 aa14.23□□□□□ -0.13
MRPL28-210ENST00000483764 GINS3Q9BRX5 216 aa14.23□□□□□ -0.13
MRPL28-210ENST00000483764 OR2S2Q9NQN1 319 aa14.23□□□□□ -0.13
MRPL28-210ENST00000483764 KAAG1Q9UBP8 84 aa14.23□□□□□ -0.13
MRPL28-210ENST00000483764 TRAPPC2LQ9UL33 140 aa14.23□□□□□ -0.13
MRPL28-210ENST00000483764 CARHSP1Q9Y2V2 147 aaKnown RBP14.23□□□□□ -0.13
MRPL28-210ENST00000483764 CRYBG3Q68DQ2 2970 aa14.23□□□□□ -0.13
MRPL28-210ENST00000483764 SCGB1D2O95969 90 aa14.22□□□□□ -0.13
MRPL28-210ENST00000483764 GLIPR1P48060 266 aa14.22□□□□□ -0.13
MRPL28-210ENST00000483764 CAV2P51636 162 aa14.22□□□□□ -0.13
MRPL28-210ENST00000483764 EDDM3AQ14507 147 aa14.22□□□□□ -0.13
MRPL28-210ENST00000483764 HMGN3Q15651 99 aa14.22□□□□□ -0.13
MRPL28-210ENST00000483764 C10orf91Q5T1B1 145 aa14.22□□□□□ -0.13
MRPL28-210ENST00000483764 FOXRED2Q8IWF2 684 aa14.22□□□□□ -0.13
MRPL28-210ENST00000483764 SELENOHQ8IZQ5 122 aaKnown RBP14.22□□□□□ -0.13
MRPL28-210ENST00000483764 LHFPL5Q8TAF8 219 aa14.22□□□□□ -0.13
MRPL28-210ENST00000483764 MBNL3Q9NUK0 354 aaKnown RBP14.22□□□□□ -0.13
MRPL28-210ENST00000483764 USF3Q68DE3 2245 aa14.22□□□□□ -0.13
MRPL28-210ENST00000483764 TRAV39A0A0B4J263 110 aa14.21□□□□□ -0.13
MRPL28-210ENST00000483764 A0A1B0GU03 582 aa14.21□□□□□ -0.13
MRPL28-210ENST00000483764 TRIM77I1YAP6 450 aa14.21□□□□□ -0.13
MRPL28-210ENST00000483764 ATG12O94817 140 aa14.21□□□□□ -0.13
MRPL28-210ENST00000483764 APOC3P02656 99 aa14.21□□□□□ -0.13
MRPL28-210ENST00000483764 RCC1P18754 421 aaPredicted RBP14.21□□□□□ -0.13
MRPL28-210ENST00000483764 F2RP25116 425 aa14.21□□□□□ -0.13
MRPL28-210ENST00000483764 KRTAP10-9P60411 292 aa14.21□□□□□ -0.13
MRPL28-210ENST00000483764 HERPUD1Q15011 391 aa14.21□□□□□ -0.13
MRPL28-210ENST00000483764 TPRX1Q8N7U7 411 aa14.21□□□□□ -0.13
MRPL28-210ENST00000483764 LYPD6BQ8NI32 183 aa14.21□□□□□ -0.13
MRPL28-210ENST00000483764 LSM10Q969L4 123 aaKnown RBP14.21□□□□□ -0.13
MRPL28-210ENST00000483764 NDUFB3O43676 98 aa14.2□□□□□ -0.14
MRPL28-210ENST00000483764 GPR6P46095 362 aaPredicted RBP14.2□□□□□ -0.14
MRPL28-210ENST00000483764 TMEM155Q4W5P6 130 aa14.2□□□□□ -0.14
MRPL28-210ENST00000483764 NMSQ5H8A3 153 aa14.2□□□□□ -0.14
MRPL28-210ENST00000483764 HIST2H2BCQ6DN03 193 aa14.2□□□□□ -0.14
MRPL28-210ENST00000483764 TRAT1Q6PIZ9 186 aa14.2□□□□□ -0.14
MRPL28-210ENST00000483764 ZNF818PQ6ZRF7 136 aa14.2□□□□□ -0.14
MRPL28-210ENST00000483764 ZNF525Q8N782 197 aa14.2□□□□□ -0.14
MRPL28-210ENST00000483764 TCTEX1D1Q8N7M0 179 aa14.2□□□□□ -0.14
MRPL28-210ENST00000483764 OR10V1Q8NGI7 309 aa14.2□□□□□ -0.14
MRPL28-210ENST00000483764 NARS2Q96I59 477 aaKnown RBP14.2□□□□□ -0.14
MRPL28-210ENST00000483764 SEC11CQ9BY50 192 aa14.2□□□□□ -0.14
MRPL28-210ENST00000483764 KCNIP1Q9NZI2 227 aa14.2□□□□□ -0.14
MRPL28-210ENST00000483764 SLC25A10Q9UBX3 287 aaPredicted RBP14.2□□□□□ -0.14
MRPL28-210ENST00000483764 AKAP6Q13023 2319 aa14.2□□□□□ -0.14
MRPL28-210ENST00000483764 DOPEY2Q9Y3R5 2298 aa14.2□□□□□ -0.14
MRPL28-210ENST00000483764 TACC2O95359 2948 aa14.2□□□□□ -0.14
MRPL28-210ENST00000483764 ODAMA1E959 279 aa14.2□□□□□ -0.14
MRPL28-210ENST00000483764 KCNAB3O43448 404 aa14.2□□□□□ -0.14
MRPL28-210ENST00000483764 PITX3O75364 302 aa14.2□□□□□ -0.14
MRPL28-210ENST00000483764 MED6O75586 246 aa14.2□□□□□ -0.14
MRPL28-210ENST00000483764 PGLYRP1O75594 196 aaPredicted RBP14.2□□□□□ -0.14
MRPL28-210ENST00000483764 SPP1P10451 314 aa14.2□□□□□ -0.14
MRPL28-210ENST00000483764 PAX1P15863 534 aa14.2□□□□□ -0.14
MRPL28-210ENST00000483764 NDUFB7P17568 137 aa14.2□□□□□ -0.14
MRPL28-210ENST00000483764 ATP5J2P56134 94 aa14.2□□□□□ -0.14
MRPL28-210ENST00000483764 EDDM3BP56851 147 aa14.2□□□□□ -0.14
MRPL28-210ENST00000483764 VAMP2P63027 116 aa14.2□□□□□ -0.14
MRPL28-210ENST00000483764 LRRC10Q5BKY1 277 aa14.2□□□□□ -0.14
MRPL28-210ENST00000483764 PXDC1Q5TGL8 231 aa14.2□□□□□ -0.14
MRPL28-210ENST00000483764 OR2C3Q8N628 320 aa14.2□□□□□ -0.14
MRPL28-210ENST00000483764 LFNGQ8NES3 379 aa14.2□□□□□ -0.14
MRPL28-210ENST00000483764 TOLLIPQ9H0E2 274 aa14.2□□□□□ -0.14
MRPL28-210ENST00000483764 NCOR1P1Q9H4R4 102 aa14.2□□□□□ -0.14
MRPL28-210ENST00000483764 C11orf1Q9H5F2 150 aa14.2□□□□□ -0.14
MRPL28-210ENST00000483764 LIN7CQ9NUP9 197 aaKnown RBP14.2□□□□□ -0.14
MRPL28-210ENST00000483764 CTSZQ9UBR2 303 aa14.2□□□□□ -0.14
MRPL28-210ENST00000483764 IGKV1-6A0A0C4DH72 117 aa14.19□□□□□ -0.14
MRPL28-210ENST00000483764 UMAD1C9J7I0 102 aa14.19□□□□□ -0.14
MRPL28-210ENST00000483764 HSPA12AO43301 675 aa14.19□□□□□ -0.14
MRPL28-210ENST00000483764 SCO1O75880 301 aa14.19□□□□□ -0.14
MRPL28-210ENST00000483764 SNAPINO95295 136 aa14.19□□□□□ -0.14
MRPL28-210ENST00000483764 SERPINE2P07093 398 aa14.19□□□□□ -0.14
MRPL28-210ENST00000483764 ID3Q02535 119 aa14.19□□□□□ -0.14
MRPL28-210ENST00000483764 BTNL8Q6UX41 500 aa14.19□□□□□ -0.14
MRPL28-210ENST00000483764 DMBX1Q8NFW5 382 aa14.19□□□□□ -0.14
MRPL28-210ENST00000483764 TSNAXQ99598 290 aaKnown RBP14.19□□□□□ -0.14
MRPL28-210ENST00000483764 SMDT1Q9H4I9 107 aa14.19□□□□□ -0.14
MRPL28-210ENST00000483764 LYRM2Q9NU23 88 aaPredicted RBP14.19□□□□□ -0.14
MRPL28-210ENST00000483764 MIOXQ9UGB7 285 aa14.19□□□□□ -0.14
MRPL28-210ENST00000483764 RCL1Q9Y2P8 373 aaKnown RBP14.19□□□□□ -0.14
MRPL28-210ENST00000483764 CELSR2Q9HCU4 2923 aa14.18□□□□□ -0.14
MRPL28-210ENST00000483764 DVL1O14640 695 aa14.18□□□□□ -0.14
MRPL28-210ENST00000483764 FCN3O75636 299 aa14.18□□□□□ -0.14
MRPL28-210ENST00000483764 PDLIM4P50479 330 aa14.18□□□□□ -0.14
MRPL28-210ENST00000483764 BTN1A1Q13410 526 aa14.18□□□□□ -0.14
MRPL28-210ENST00000483764 ZNF273Q14593 569 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms