RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 UNQ5815/PRO19632Q6UWF5 114 aa5.65□□□□□ -1.5
CSDE1-206ENST00000483030 ZNF833PQ6ZTB9 187 aa5.65□□□□□ -1.5
CSDE1-206ENST00000483030 PPP1R27Q86WC6 154 aa5.65□□□□□ -1.5
CSDE1-206ENST00000483030 GAPTQ8N292 157 aa5.65□□□□□ -1.5
CSDE1-206ENST00000483030 MRPS24Q96EL2 167 aaKnown RBP5.65□□□□□ -1.5
CSDE1-206ENST00000483030 CYYR1Q96J86 154 aa5.65□□□□□ -1.5
CSDE1-206ENST00000483030 CCDC140Q96MF4 163 aa5.65□□□□□ -1.5
CSDE1-206ENST00000483030 CLCC1Q96S66 551 aa5.65□□□□□ -1.5
CSDE1-206ENST00000483030 ZNF184Q99676 751 aaPredicted RBP5.65□□□□□ -1.5
CSDE1-206ENST00000483030 FAM103A1Q9BTL3 118 aaKnown RBP5.65□□□□□ -1.5
CSDE1-206ENST00000483030 TMED9Q9BVK6 235 aa5.65□□□□□ -1.5
CSDE1-206ENST00000483030 KRTAP4-8Q9BYQ9 185 aa5.65□□□□□ -1.5
CSDE1-206ENST00000483030 TUBA4BQ9H853 241 aa5.65□□□□□ -1.5
CSDE1-206ENST00000483030 VCX3AQ9NNX9 186 aa5.65□□□□□ -1.5
CSDE1-206ENST00000483030 KCNIP1Q9NZI2 227 aa5.65□□□□□ -1.5
CSDE1-206ENST00000483030 CNOT2Q9NZN8 540 aaKnown RBP5.65□□□□□ -1.5
CSDE1-206ENST00000483030 RCC2Q9P258 522 aaKnown RBP5.65□□□□□ -1.5
CSDE1-206ENST00000483030 GAB2Q9UQC2 676 aa5.65□□□□□ -1.5
CSDE1-206ENST00000483030 ORC6Q9Y5N6 252 aa5.65□□□□□ -1.5
CSDE1-206ENST00000483030 SAA2-SAA4A0A096LPE2 208 aa5.64□□□□□ -1.51
CSDE1-206ENST00000483030 RRHO14718 337 aa5.64□□□□□ -1.51
CSDE1-206ENST00000483030 ARPC1BO15143 372 aaKnown RBP5.64□□□□□ -1.51
CSDE1-206ENST00000483030 YPEL1O60688 119 aa5.64□□□□□ -1.51
CSDE1-206ENST00000483030 CA11O75493 328 aa5.64□□□□□ -1.51
CSDE1-206ENST00000483030 TRGV3P03979 118 aa5.64□□□□□ -1.51
CSDE1-206ENST00000483030 MAS1P04201 325 aa5.64□□□□□ -1.51
CSDE1-206ENST00000483030 ALPLP05186 524 aa5.64□□□□□ -1.51
CSDE1-206ENST00000483030 SAA2P0DJI9 122 aaPredicted RBP5.64□□□□□ -1.51
CSDE1-206ENST00000483030 GABRB1P18505 474 aa5.64□□□□□ -1.51
CSDE1-206ENST00000483030 FUT3P21217 361 aa5.64□□□□□ -1.51
CSDE1-206ENST00000483030 CD40LGP29965 261 aa5.64□□□□□ -1.51
CSDE1-206ENST00000483030 RIPK1Q13546 671 aa5.64□□□□□ -1.51
CSDE1-206ENST00000483030 RGS21Q2M5E4 152 aa5.64□□□□□ -1.51
CSDE1-206ENST00000483030 AKIRIN2Q53H80 203 aa5.64□□□□□ -1.51
CSDE1-206ENST00000483030 PYHIN1Q6K0P9 492 aa5.64□□□□□ -1.51
CSDE1-206ENST00000483030 RPL22L1Q6P5R6 122 aaKnown RBP5.64□□□□□ -1.51
CSDE1-206ENST00000483030 GLIPR1L1Q6UWM5 242 aa5.64□□□□□ -1.51
CSDE1-206ENST00000483030 FAM131AQ6UXB0 335 aa5.64□□□□□ -1.51
CSDE1-206ENST00000483030 GLDNQ6ZMI3 551 aaPredicted RBP5.64□□□□□ -1.51
CSDE1-206ENST00000483030 CDH26Q8IXH8 852 aa5.64□□□□□ -1.51
CSDE1-206ENST00000483030 TCTEX1D1Q8N7M0 179 aa5.64□□□□□ -1.51
CSDE1-206ENST00000483030 LFNGQ8NES3 379 aa5.64□□□□□ -1.51
CSDE1-206ENST00000483030 OR52I1Q8NGK6 324 aa5.64□□□□□ -1.51
CSDE1-206ENST00000483030 RHOXF1Q8NHV9 184 aa5.64□□□□□ -1.51
CSDE1-206ENST00000483030 IL17DQ8TAD2 202 aa5.64□□□□□ -1.51
CSDE1-206ENST00000483030 MUL1Q969V5 352 aa5.64□□□□□ -1.51
CSDE1-206ENST00000483030 Q96MT0 163 aa5.64□□□□□ -1.51
CSDE1-206ENST00000483030 RDH12Q96NR8 316 aa5.64□□□□□ -1.51
CSDE1-206ENST00000483030 YPEL2Q96QA6 119 aa5.64□□□□□ -1.51
CSDE1-206ENST00000483030 SELENOIQ9C0D9 397 aa5.64□□□□□ -1.51
CSDE1-206ENST00000483030 BANF2Q9H503 90 aa5.64□□□□□ -1.51
CSDE1-206ENST00000483030 RANGRFQ9HD47 186 aaPredicted RBP5.64□□□□□ -1.51
CSDE1-206ENST00000483030 RETNQ9HD89 108 aa5.64□□□□□ -1.51
CSDE1-206ENST00000483030 ZNF355PQ9NSJ1 428 aa5.64□□□□□ -1.51
CSDE1-206ENST00000483030 MBNL3Q9NUK0 354 aaKnown RBP5.64□□□□□ -1.51
CSDE1-206ENST00000483030 JPT1Q9UK76 154 aa5.64□□□□□ -1.51
CSDE1-206ENST00000483030 RNF150Q9ULK6 438 aa5.64□□□□□ -1.51
CSDE1-206ENST00000483030 GMPPBQ9Y5P6 360 aa5.64□□□□□ -1.51
CSDE1-206ENST00000483030 CSMD3Q7Z407 3707 aa5.63□□□□□ -1.51
CSDE1-206ENST00000483030 TRAV8-7A0A075B6U6 113 aa5.63□□□□□ -1.51
CSDE1-206ENST00000483030 NOTOA8MTQ0 251 aa5.63□□□□□ -1.51
CSDE1-206ENST00000483030 H0Y980 276 aa5.63□□□□□ -1.51
CSDE1-206ENST00000483030 H7C2Y5 167 aa5.63□□□□□ -1.51
CSDE1-206ENST00000483030 EI24O14681 340 aa5.63□□□□□ -1.51
CSDE1-206ENST00000483030 SHOXO15266 292 aa5.63□□□□□ -1.51
CSDE1-206ENST00000483030 SC5DO75845 299 aa5.63□□□□□ -1.51
CSDE1-206ENST00000483030 RGS11O94810 467 aa5.63□□□□□ -1.51
CSDE1-206ENST00000483030 GLAP06280 429 aa5.63□□□□□ -1.51
CSDE1-206ENST00000483030 GSTT2P0CG29 244 aa5.63□□□□□ -1.51
CSDE1-206ENST00000483030 GSTT2BP0CG30 244 aa5.63□□□□□ -1.51
CSDE1-206ENST00000483030 LIMS3P0CW19 117 aa5.63□□□□□ -1.51
CSDE1-206ENST00000483030 LIMS4P0CW20 117 aa5.63□□□□□ -1.51
CSDE1-206ENST00000483030 CT45A6P0DMU7 189 aa5.63□□□□□ -1.51
CSDE1-206ENST00000483030 CT45A5P0DMU8 189 aa5.63□□□□□ -1.51
CSDE1-206ENST00000483030 CT45A7P0DMV0 189 aa5.63□□□□□ -1.51
CSDE1-206ENST00000483030 SNRPBP14678 240 aaKnown RBP5.63□□□□□ -1.51
CSDE1-206ENST00000483030 IGFBP3P17936 291 aaPredicted RBP5.63□□□□□ -1.51
CSDE1-206ENST00000483030 ZP3P21754 424 aa5.63□□□□□ -1.51
CSDE1-206ENST00000483030 TSPAN5P62079 268 aa5.63□□□□□ -1.51
CSDE1-206ENST00000483030 HTD2P86397 168 aa5.63□□□□□ -1.51
CSDE1-206ENST00000483030 KLF5Q13887 457 aaPredicted RBP5.63□□□□□ -1.51
CSDE1-206ENST00000483030 ODF1Q14990 250 aa5.63□□□□□ -1.51
CSDE1-206ENST00000483030 CCDC58Q4VC31 144 aa5.63□□□□□ -1.51
CSDE1-206ENST00000483030 RPL39P5Q59GN2 51 aa5.63□□□□□ -1.51
CSDE1-206ENST00000483030 LY6G6FQ5SQ64 297 aa5.63□□□□□ -1.51
CSDE1-206ENST00000483030 OR2G6Q5TZ20 316 aa5.63□□□□□ -1.51
CSDE1-206ENST00000483030 ZNF562Q6V9R5 426 aa5.63□□□□□ -1.51
CSDE1-206ENST00000483030 IL34Q6ZMJ4 242 aa5.63□□□□□ -1.51
CSDE1-206ENST00000483030 JAGN1Q8N5M9 183 aa5.63□□□□□ -1.51
CSDE1-206ENST00000483030 OR5T1Q8NG75 326 aa5.63□□□□□ -1.51
CSDE1-206ENST00000483030 OR2AK2Q8NG84 335 aa5.63□□□□□ -1.51
CSDE1-206ENST00000483030 OR13C5Q8NGS8 318 aa5.63□□□□□ -1.51
CSDE1-206ENST00000483030 MRPL30Q8TCC3 161 aaKnown RBP5.63□□□□□ -1.51
CSDE1-206ENST00000483030 GHSRQ92847 366 aa5.63□□□□□ -1.51
CSDE1-206ENST00000483030 GALMQ96C23 342 aa5.63□□□□□ -1.51
CSDE1-206ENST00000483030 WDR89Q96FK6 387 aaPredicted RBP5.63□□□□□ -1.51
CSDE1-206ENST00000483030 TXN2Q99757 166 aa5.63□□□□□ -1.51
CSDE1-206ENST00000483030 FAM110AQ9BQ89 295 aa5.63□□□□□ -1.51
CSDE1-206ENST00000483030 HIPK2Q9H2X6 1198 aa5.63□□□□□ -1.51
CSDE1-206ENST00000483030 IFI27L2Q9H2X8 130 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms