RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 VSIG10L2P0DP72 767 aa13.19□□□□□ -0.3
HMGN1-214ENST00000482733 ELK1P19419 428 aa13.19□□□□□ -0.3
HMGN1-214ENST00000482733 KRTAP10-3P60369 221 aa13.19□□□□□ -0.3
HMGN1-214ENST00000482733 C9orf152Q5JTZ5 239 aa13.19□□□□□ -0.3
HMGN1-214ENST00000482733 GVQW1Q8N7I0 195 aa13.19□□□□□ -0.3
HMGN1-214ENST00000482733 OR5AN1Q8NGI8 311 aa13.19□□□□□ -0.3
HMGN1-214ENST00000482733 ISOC1Q96CN7 298 aa13.19□□□□□ -0.3
HMGN1-214ENST00000482733 WNT10AQ9GZT5 417 aa13.19□□□□□ -0.3
HMGN1-214ENST00000482733 PLSCR3Q9NRY6 295 aa13.19□□□□□ -0.3
HMGN1-214ENST00000482733 LIN7CQ9NUP9 197 aaKnown RBP13.19□□□□□ -0.3
HMGN1-214ENST00000482733 CCDC59Q9P031 241 aaKnown RBP13.19□□□□□ -0.3
HMGN1-214ENST00000482733 OR2W1Q9Y3N9 320 aa13.19□□□□□ -0.3
HMGN1-214ENST00000482733 RBBP9O75884 186 aa13.18□□□□□ -0.3
HMGN1-214ENST00000482733 SLC22A5O76082 557 aa13.18□□□□□ -0.3
HMGN1-214ENST00000482733 TPPPO94811 219 aa13.18□□□□□ -0.3
HMGN1-214ENST00000482733 HLA-DQB1P01920 261 aa13.18□□□□□ -0.3
HMGN1-214ENST00000482733 PTHLHP12272 177 aa13.18□□□□□ -0.3
HMGN1-214ENST00000482733 LUMP51884 338 aaPredicted RBP13.18□□□□□ -0.3
HMGN1-214ENST00000482733 ACTBP60709 375 aa13.18□□□□□ -0.3
HMGN1-214ENST00000482733 Q8N9W7 124 aa13.18□□□□□ -0.3
HMGN1-214ENST00000482733 RNF5Q99942 180 aa13.18□□□□□ -0.3
HMGN1-214ENST00000482733 RASL11BQ9BPW5 248 aa13.18□□□□□ -0.3
HMGN1-214ENST00000482733 SCPEP1Q9HB40 452 aa13.18□□□□□ -0.3
HMGN1-214ENST00000482733 NECAP2Q9NVZ3 263 aa13.18□□□□□ -0.3
HMGN1-214ENST00000482733 SDHAF2Q9NX18 166 aa13.18□□□□□ -0.3
HMGN1-214ENST00000482733 ADAM30Q9UKF2 790 aa13.18□□□□□ -0.3
HMGN1-214ENST00000482733 MRPS7Q9Y2R9 242 aaKnown RBP13.18□□□□□ -0.3
HMGN1-214ENST00000482733 WASHC3Q9Y3C0 194 aa13.18□□□□□ -0.3
HMGN1-214ENST00000482733 CEPT1Q9Y6K0 416 aa13.18□□□□□ -0.3
HMGN1-214ENST00000482733 H0YJW9 148 aa13.17□□□□□ -0.3
HMGN1-214ENST00000482733 H3BMQ9 156 aa13.17□□□□□ -0.3
HMGN1-214ENST00000482733 H7C2Y5 167 aa13.17□□□□□ -0.3
HMGN1-214ENST00000482733 M0R1X1 148 aa13.17□□□□□ -0.3
HMGN1-214ENST00000482733 PROP1O75360 226 aa13.17□□□□□ -0.3
HMGN1-214ENST00000482733 APOA2P02652 100 aa13.17□□□□□ -0.3
HMGN1-214ENST00000482733 NFYAP23511 347 aaPredicted RBP13.17□□□□□ -0.3
HMGN1-214ENST00000482733 TAGLNQ01995 201 aaKnown RBP13.17□□□□□ -0.3
HMGN1-214ENST00000482733 SRSF4Q08170 494 aaKnown RBP13.17□□□□□ -0.3
HMGN1-214ENST00000482733 MMDQ15546 238 aa13.17□□□□□ -0.3
HMGN1-214ENST00000482733 FAM131AQ6UXB0 335 aa13.17□□□□□ -0.3
HMGN1-214ENST00000482733 OR5AP2Q8NGF4 316 aa13.17□□□□□ -0.3
HMGN1-214ENST00000482733 DYNC2LI1Q8TCX1 351 aa13.17□□□□□ -0.3
HMGN1-214ENST00000482733 C15orf40Q8WUR7 153 aa13.17□□□□□ -0.3
HMGN1-214ENST00000482733 ANAPC10Q9UM13 185 aa13.17□□□□□ -0.3
HMGN1-214ENST00000482733 SH2D7A6NKC9 451 aaPredicted RBP13.16□□□□□ -0.3
HMGN1-214ENST00000482733 SULT1C2O00338 296 aa13.16□□□□□ -0.3
HMGN1-214ENST00000482733 TUSC2O75896 110 aa13.16□□□□□ -0.3
HMGN1-214ENST00000482733 IGHG2P01859 326 aa13.16□□□□□ -0.3
HMGN1-214ENST00000482733 THBS3P49746 956 aa13.16□□□□□ -0.3
HMGN1-214ENST00000482733 F2RL1P55085 397 aa13.16□□□□□ -0.3
HMGN1-214ENST00000482733 TMEM95Q3KNT9 176 aa13.16□□□□□ -0.3
HMGN1-214ENST00000482733 GLDNQ6ZMI3 551 aaPredicted RBP13.16□□□□□ -0.3
HMGN1-214ENST00000482733 SLC35E3Q7Z769 313 aa13.16□□□□□ -0.3
HMGN1-214ENST00000482733 PDPNQ86YL7 162 aa13.16□□□□□ -0.3
HMGN1-214ENST00000482733 FAM71E2Q8N5Q1 922 aa13.16□□□□□ -0.3
HMGN1-214ENST00000482733 ZNF645Q8N7E2 425 aa13.16□□□□□ -0.3
HMGN1-214ENST00000482733 NPBQ8NG41 125 aa13.16□□□□□ -0.3
HMGN1-214ENST00000482733 GPX8Q8TED1 209 aa13.16□□□□□ -0.3
HMGN1-214ENST00000482733 WIPF2Q8TF74 440 aaPredicted RBP13.16□□□□□ -0.3
HMGN1-214ENST00000482733 SNAPC3Q92966 411 aa13.16□□□□□ -0.3
HMGN1-214ENST00000482733 ADTRPQ96IZ2 230 aa13.16□□□□□ -0.3
HMGN1-214ENST00000482733 KIAA1456Q9P272 454 aa13.16□□□□□ -0.3
HMGN1-214ENST00000482733 EXTL2Q9UBQ6 330 aa13.16□□□□□ -0.3
HMGN1-214ENST00000482733 MEIS3P1A6NDR6 274 aa13.15□□□□□ -0.3
HMGN1-214ENST00000482733 CCDC160A6NGH7 325 aa13.15□□□□□ -0.3
HMGN1-214ENST00000482733 M0QZ24 198 aa13.15□□□□□ -0.3
HMGN1-214ENST00000482733 NBR2O15453 112 aa13.15□□□□□ -0.3
HMGN1-214ENST00000482733 RGS5O15539 181 aa13.15□□□□□ -0.3
HMGN1-214ENST00000482733 KCNAB3O43448 404 aa13.15□□□□□ -0.3
HMGN1-214ENST00000482733 OR5H8P0DN80 308 aa13.15□□□□□ -0.3
HMGN1-214ENST00000482733 NAT1P18440 290 aa13.15□□□□□ -0.3
HMGN1-214ENST00000482733 TAS2R46P59540 309 aa13.15□□□□□ -0.3
HMGN1-214ENST00000482733 CDK10Q15131 360 aa13.15□□□□□ -0.3
HMGN1-214ENST00000482733 CENPVQ7Z7K6 275 aaPredicted RBP13.15□□□□□ -0.3
HMGN1-214ENST00000482733 SNX29P2Q8IUI4 249 aa13.15□□□□□ -0.3
HMGN1-214ENST00000482733 FOXRED2Q8IWF2 684 aa13.15□□□□□ -0.3
HMGN1-214ENST00000482733 ZNF383Q8NA42 475 aa13.15□□□□□ -0.3
HMGN1-214ENST00000482733 DRAXINQ8NBI3 349 aaPredicted RBP13.15□□□□□ -0.3
HMGN1-214ENST00000482733 FBXO24O75426 580 aa13.14□□□□□ -0.31
HMGN1-214ENST00000482733 RRASP10301 218 aa13.14□□□□□ -0.31
HMGN1-214ENST00000482733 FCGR2CP31995 323 aa13.14□□□□□ -0.31
HMGN1-214ENST00000482733 CBX3Q13185 183 aa13.14□□□□□ -0.31
HMGN1-214ENST00000482733 GIMAP1Q8WWP7 306 aa13.14□□□□□ -0.31
HMGN1-214ENST00000482733 RITA1Q96K30 269 aa13.14□□□□□ -0.31
HMGN1-214ENST00000482733 SLC35D1Q9NTN3 355 aa13.14□□□□□ -0.31
HMGN1-214ENST00000482733 RABL2AQ9UBK7 228 aaPredicted RBP13.14□□□□□ -0.31
HMGN1-214ENST00000482733 RABL2BQ9UNT1 228 aa13.14□□□□□ -0.31
HMGN1-214ENST00000482733 J3QRK9 145 aa13.13□□□□□ -0.31
HMGN1-214ENST00000482733 ZNF701M0R085 212 aaPredicted RBP13.13□□□□□ -0.31
HMGN1-214ENST00000482733 AP4M1O00189 453 aa13.13□□□□□ -0.31
HMGN1-214ENST00000482733 CTDSP2O14595 271 aa13.13□□□□□ -0.31
HMGN1-214ENST00000482733 NDUFA3O95167 84 aa13.13□□□□□ -0.31
HMGN1-214ENST00000482733 FCER2P06734 321 aa13.13□□□□□ -0.31
HMGN1-214ENST00000482733 MSMO1Q15800 293 aa13.13□□□□□ -0.31
HMGN1-214ENST00000482733 RTL8BQ17RB0 113 aa13.13□□□□□ -0.31
HMGN1-214ENST00000482733 C5orf64Q2M2E5 130 aa13.13□□□□□ -0.31
HMGN1-214ENST00000482733 PRR31Q5SQ13 230 aa13.13□□□□□ -0.31
HMGN1-214ENST00000482733 OR5AU1Q8NGC0 362 aa13.13□□□□□ -0.31
HMGN1-214ENST00000482733 OR5H2Q8NGV7 314 aa13.13□□□□□ -0.31
HMGN1-214ENST00000482733 CHPT1Q8WUD6 406 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms