RNA–Protein interactions for RNA: ENST00000481116.5

ABCF3-215, Transcript of ATP binding cassette subfamily F member 3, human

TSL 4

Gene ABCF3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCF3-215	ENST00000481116	CABLES2	Q9BTV7	478 aa		10.1	□□□□□ -0.79
ABCF3-215	ENST00000481116	ZNF221	Q9UK13	617 aa		10.1	□□□□□ -0.79
ABCF3-215	ENST00000481116	WSB1	Q9Y6I7	421 aa		10.1	□□□□□ -0.79
ABCF3-215	ENST00000481116	NOTCH3	Q9UM47	2321 aa		10.1	□□□□□ -0.79
ABCF3-215	ENST00000481116	TRBV6-7	A0A0A0MS04	114 aa		10.09	□□□□□ -0.79
ABCF3-215	ENST00000481116	IGHV7-81	A0A0B4J1V7	117 aa		10.09	□□□□□ -0.79
ABCF3-215	ENST00000481116	TMEM235	A6NFC5	223 aa		10.09	□□□□□ -0.79
ABCF3-215	ENST00000481116	OR5H14	A6NHG9	310 aa		10.09	□□□□□ -0.79
ABCF3-215	ENST00000481116	NUDT19	A8MXV4	375 aa		10.09	□□□□□ -0.79
ABCF3-215	ENST00000481116		G3V318	75 aa		10.09	□□□□□ -0.79
ABCF3-215	ENST00000481116		J3QRK9	145 aa		10.09	□□□□□ -0.79
ABCF3-215	ENST00000481116	ATP6V0E1	O15342	81 aa		10.09	□□□□□ -0.79
ABCF3-215	ENST00000481116	NDUFA3	O95167	84 aa		10.09	□□□□□ -0.79
ABCF3-215	ENST00000481116	OR8U9	P0C7N5	309 aa		10.09	□□□□□ -0.79
ABCF3-215	ENST00000481116	VDAC1	P21796	283 aa		10.09	□□□□□ -0.79
ABCF3-215	ENST00000481116	TALDO1	P37837	337 aa		10.09	□□□□□ -0.79
ABCF3-215	ENST00000481116	LSM3	P62310	102 aa	Known RBP	10.09	□□□□□ -0.79
ABCF3-215	ENST00000481116	CFHR3	Q02985	330 aa		10.09	□□□□□ -0.79
ABCF3-215	ENST00000481116	KIR2DS1	Q14954	304 aa		10.09	□□□□□ -0.79
ABCF3-215	ENST00000481116	TEX38	Q6PEX7	206 aa		10.09	□□□□□ -0.79
ABCF3-215	ENST00000481116	ZNF383	Q8NA42	475 aa		10.09	□□□□□ -0.79
ABCF3-215	ENST00000481116	TSPAN14	Q8NG11	270 aa		10.09	□□□□□ -0.79
ABCF3-215	ENST00000481116	NPB	Q8NG41	125 aa		10.09	□□□□□ -0.79
ABCF3-215	ENST00000481116	OR8U1	Q8NH10	309 aa		10.09	□□□□□ -0.79
ABCF3-215	ENST00000481116	OR10J5	Q8NHC4	309 aa		10.09	□□□□□ -0.79
ABCF3-215	ENST00000481116	NUDCD2	Q8WVJ2	157 aa		10.09	□□□□□ -0.79
ABCF3-215	ENST00000481116	C5orf30	Q96GV9	206 aa		10.09	□□□□□ -0.79
ABCF3-215	ENST00000481116	CLCC1	Q96S66	551 aa		10.09	□□□□□ -0.79
ABCF3-215	ENST00000481116	ST6GALNAC5	Q9BVH7	336 aa		10.09	□□□□□ -0.79
ABCF3-215	ENST00000481116	OR2D2	Q9H210	308 aa		10.09	□□□□□ -0.79
ABCF3-215	ENST00000481116	PARP11	Q9NR21	331 aa		10.09	□□□□□ -0.79
ABCF3-215	ENST00000481116	KIAA1456	Q9P272	454 aa		10.09	□□□□□ -0.79
ABCF3-215	ENST00000481116		M0R1X1	148 aa		10.08	□□□□□ -0.8
ABCF3-215	ENST00000481116	FCN1	O00602	326 aa		10.08	□□□□□ -0.8
ABCF3-215	ENST00000481116	RRH	O14718	337 aa		10.08	□□□□□ -0.8
ABCF3-215	ENST00000481116	HLA-DRB1	P01911	266 aa		10.08	□□□□□ -0.8
ABCF3-215	ENST00000481116	GSTP1	P09211	210 aa	Known RBP	10.08	□□□□□ -0.8
ABCF3-215	ENST00000481116	SERPINB10	P48595	397 aa		10.08	□□□□□ -0.8
ABCF3-215	ENST00000481116	THBS3	P49746	956 aa		10.08	□□□□□ -0.8
ABCF3-215	ENST00000481116	NDP	Q00604	133 aa		10.08	□□□□□ -0.8
ABCF3-215	ENST00000481116	ZNF260	Q3ZCT1	412 aa		10.08	□□□□□ -0.8
ABCF3-215	ENST00000481116	KPRP	Q5T749	579 aa	Predicted RBP	10.08	□□□□□ -0.8
ABCF3-215	ENST00000481116	HACD4	Q5VWC8	232 aa		10.08	□□□□□ -0.8
ABCF3-215	ENST00000481116	LIN54	Q6MZP7	749 aa		10.08	□□□□□ -0.8
ABCF3-215	ENST00000481116	COMMD1	Q8N668	190 aa		10.08	□□□□□ -0.8
ABCF3-215	ENST00000481116	WFDC9	Q8NEX5	89 aa		10.08	□□□□□ -0.8
ABCF3-215	ENST00000481116	OR5AN1	Q8NGI8	311 aa		10.08	□□□□□ -0.8
ABCF3-215	ENST00000481116	YIPF6	Q96EC8	236 aa		10.08	□□□□□ -0.8
ABCF3-215	ENST00000481116	TOLLIP	Q9H0E2	274 aa		10.08	□□□□□ -0.8
ABCF3-215	ENST00000481116	OR51J1	Q9H342	316 aa		10.08	□□□□□ -0.8
ABCF3-215	ENST00000481116	GHITM	Q9H3K2	345 aa		10.08	□□□□□ -0.8
ABCF3-215	ENST00000481116	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	10.08	□□□□□ -0.8
ABCF3-215	ENST00000481116	ZFP57	Q9NU63	452 aa		10.08	□□□□□ -0.8
ABCF3-215	ENST00000481116	SDHAF2	Q9NX18	166 aa		10.08	□□□□□ -0.8
ABCF3-215	ENST00000481116	RHBDL2	Q9NX52	303 aa		10.08	□□□□□ -0.8
ABCF3-215	ENST00000481116	WASHC3	Q9Y3C0	194 aa		10.08	□□□□□ -0.8
ABCF3-215	ENST00000481116	FBXO7	Q9Y3I1	522 aa		10.08	□□□□□ -0.8
ABCF3-215	ENST00000481116		A0A087WXM4	84 aa		10.07	□□□□□ -0.8
ABCF3-215	ENST00000481116	SSX5	O60225	188 aa		10.07	□□□□□ -0.8
ABCF3-215	ENST00000481116	TNFAIP8	O95379	198 aa		10.07	□□□□□ -0.8
ABCF3-215	ENST00000481116	IGKV1-16	P04430	117 aa		10.07	□□□□□ -0.8
ABCF3-215	ENST00000481116	IGF1	P05019	195 aa		10.07	□□□□□ -0.8
ABCF3-215	ENST00000481116	TFAP2A	P05549	437 aa		10.07	□□□□□ -0.8
ABCF3-215	ENST00000481116	MC5R	P33032	325 aa		10.07	□□□□□ -0.8
ABCF3-215	ENST00000481116	RPS16	P62249	146 aa	Known RBP	10.07	□□□□□ -0.8
ABCF3-215	ENST00000481116	PLGLA	Q15195	96 aa		10.07	□□□□□ -0.8
ABCF3-215	ENST00000481116	DEFB136	Q30KP8	78 aa		10.07	□□□□□ -0.8
ABCF3-215	ENST00000481116	CXorf66	Q5JRM2	361 aa	Predicted RBP	10.07	□□□□□ -0.8
ABCF3-215	ENST00000481116	FOXB2	Q5VYV0	432 aa		10.07	□□□□□ -0.8
ABCF3-215	ENST00000481116	ZNF695	Q8IW36	515 aa		10.07	□□□□□ -0.8
ABCF3-215	ENST00000481116	MRPL41	Q8IXM3	137 aa	Known RBP	10.07	□□□□□ -0.8
ABCF3-215	ENST00000481116	LINC00482	Q8N8I6	264 aa		10.07	□□□□□ -0.8
ABCF3-215	ENST00000481116	SLC25A38	Q96DW6	304 aa		10.07	□□□□□ -0.8
ABCF3-215	ENST00000481116	GINS4	Q9BRT9	223 aa		10.07	□□□□□ -0.8
ABCF3-215	ENST00000481116	GON7	Q9BXV9	100 aa		10.07	□□□□□ -0.8
ABCF3-215	ENST00000481116	GAB2	Q9UQC2	676 aa		10.07	□□□□□ -0.8
ABCF3-215	ENST00000481116	RBM7	Q9Y580	266 aa	Known RBP	10.07	□□□□□ -0.8
ABCF3-215	ENST00000481116	TG	P01266	2768 aa		10.06	□□□□□ -0.8
ABCF3-215	ENST00000481116	TRAV18	A0A075B6X5	111 aa		10.06	□□□□□ -0.8
ABCF3-215	ENST00000481116	AIRE	O43918	545 aa		10.06	□□□□□ -0.8
ABCF3-215	ENST00000481116	IGHG4	P01861	327 aa		10.06	□□□□□ -0.8
ABCF3-215	ENST00000481116	PTHLH	P12272	177 aa		10.06	□□□□□ -0.8
ABCF3-215	ENST00000481116	DTYMK	P23919	212 aa		10.06	□□□□□ -0.8
ABCF3-215	ENST00000481116	PPIF	P30405	207 aa	Known RBP	10.06	□□□□□ -0.8
ABCF3-215	ENST00000481116	FOXE3	Q13461	319 aa		10.06	□□□□□ -0.8
ABCF3-215	ENST00000481116	PSG5	Q15238	335 aa		10.06	□□□□□ -0.8
ABCF3-215	ENST00000481116	SRSF7	Q16629	238 aa	Known RBP eCLIP	10.06	□□□□□ -0.8
ABCF3-215	ENST00000481116	ECSCR	Q19T08	205 aa		10.06	□□□□□ -0.8
ABCF3-215	ENST00000481116		Q6ZS49	121 aa		10.06	□□□□□ -0.8
ABCF3-215	ENST00000481116	H1FOO	Q8IZA3	346 aa	Predicted RBP	10.06	□□□□□ -0.8
ABCF3-215	ENST00000481116	RAX2	Q96IS3	184 aa		10.06	□□□□□ -0.8
ABCF3-215	ENST00000481116	KLK15	Q9H2R5	256 aa		10.06	□□□□□ -0.8
ABCF3-215	ENST00000481116	TPSG1	Q9NRR2	321 aa		10.06	□□□□□ -0.8
ABCF3-215	ENST00000481116	SLC35D1	Q9NTN3	355 aa		10.06	□□□□□ -0.8
ABCF3-215	ENST00000481116	METTL1	Q9UBP6	276 aa	Known RBP	10.06	□□□□□ -0.8
ABCF3-215	ENST00000481116	A3GALT2	U3KPV4	340 aa		10.06	□□□□□ -0.8
ABCF3-215	ENST00000481116	TRAV41	A0A0B4J266	112 aa		10.05	□□□□□ -0.8
ABCF3-215	ENST00000481116	APOA2	P02652	100 aa		10.05	□□□□□ -0.8
ABCF3-215	ENST00000481116	FCER2	P06734	321 aa		10.05	□□□□□ -0.8
ABCF3-215	ENST00000481116	ELANE	P08246	267 aa		10.05	□□□□□ -0.8

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