RNA–Protein interactions for RNA: ENST00000480219.1

SCAMP3-207, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-207ENST00000480219 ZNF16P17020 682 aaPredicted RBP13.67□□□□□ -0.22
SCAMP3-207ENST00000480219 PI3P19957 117 aa13.67□□□□□ -0.22
SCAMP3-207ENST00000480219 ANXA7P20073 488 aaKnown RBP13.67□□□□□ -0.22
SCAMP3-207ENST00000480219 COX7A1P24310 79 aa13.67□□□□□ -0.22
SCAMP3-207ENST00000480219 IL3RAP26951 378 aa13.67□□□□□ -0.22
SCAMP3-207ENST00000480219 SUPT4H1P63272 117 aaKnown RBP13.67□□□□□ -0.22
SCAMP3-207ENST00000480219 KLRD1Q13241 179 aa13.67□□□□□ -0.22
SCAMP3-207ENST00000480219 MIDNQ504T8 468 aa13.67□□□□□ -0.22
SCAMP3-207ENST00000480219 LYG1Q8N1E2 194 aa13.67□□□□□ -0.22
SCAMP3-207ENST00000480219 TCTEX1D1Q8N7M0 179 aa13.67□□□□□ -0.22
SCAMP3-207ENST00000480219 OR10X1Q8NGY0 326 aa13.67□□□□□ -0.22
SCAMP3-207ENST00000480219 HSD17B10Q99714 261 aaKnown RBP13.67□□□□□ -0.22
SCAMP3-207ENST00000480219 FAM212BQ9NTI7 297 aaPredicted RBP13.67□□□□□ -0.22
SCAMP3-207ENST00000480219 MPPED1O15442 326 aa13.66□□□□□ -0.22
SCAMP3-207ENST00000480219 AVPP01185 164 aa13.66□□□□□ -0.22
SCAMP3-207ENST00000480219 OR4E1P0C645 316 aa13.66□□□□□ -0.22
SCAMP3-207ENST00000480219 S100GP29377 79 aa13.66□□□□□ -0.22
SCAMP3-207ENST00000480219 DUTP33316 252 aaKnown RBP13.66□□□□□ -0.22
SCAMP3-207ENST00000480219 ZNF816Q0VGE8 651 aaPredicted RBP13.66□□□□□ -0.22
SCAMP3-207ENST00000480219 ABCA11PQ4W5N1 156 aa13.66□□□□□ -0.22
SCAMP3-207ENST00000480219 LDLRAD2Q5SZI1 272 aa13.66□□□□□ -0.22
SCAMP3-207ENST00000480219 GLDNQ6ZMI3 551 aaPredicted RBP13.66□□□□□ -0.22
SCAMP3-207ENST00000480219 TMED4Q7Z7H5 227 aa13.66□□□□□ -0.22
SCAMP3-207ENST00000480219 RTN4IP1Q8WWV3 396 aaPredicted RBP13.66□□□□□ -0.22
SCAMP3-207ENST00000480219 DDB2Q92466 427 aa13.66□□□□□ -0.22
SCAMP3-207ENST00000480219 LHX4Q969G2 390 aa13.66□□□□□ -0.22
SCAMP3-207ENST00000480219 S1PR3Q99500 378 aa13.66□□□□□ -0.22
SCAMP3-207ENST00000480219 NAA60Q9H7X0 242 aa13.66□□□□□ -0.22
SCAMP3-207ENST00000480219 ITGB1BP2Q9UKP3 347 aa13.66□□□□□ -0.22
SCAMP3-207ENST00000480219 KCNS2Q9ULS6 477 aa13.66□□□□□ -0.22
SCAMP3-207ENST00000480219 WNK2Q9Y3S1 2297 aa13.66□□□□□ -0.22
SCAMP3-207ENST00000480219 SETXQ7Z333 2677 aaKnown RBP13.66□□□□□ -0.22
SCAMP3-207ENST00000480219 SNRPGP15A8MWD9 76 aa13.65□□□□□ -0.22
SCAMP3-207ENST00000480219 OOSP1A8MZH6 123 aa13.65□□□□□ -0.22
SCAMP3-207ENST00000480219 TXNL1O43396 289 aa13.65□□□□□ -0.22
SCAMP3-207ENST00000480219 CD5LO43866 347 aa13.65□□□□□ -0.22
SCAMP3-207ENST00000480219 ARG1P05089 322 aa13.65□□□□□ -0.22
SCAMP3-207ENST00000480219 F2RP25116 425 aa13.65□□□□□ -0.22
SCAMP3-207ENST00000480219 HTR1DP28221 377 aa13.65□□□□□ -0.22
SCAMP3-207ENST00000480219 BPIFB3P59826 476 aa13.65□□□□□ -0.22
SCAMP3-207ENST00000480219 PRB3Q04118 309 aaPredicted RBP13.65□□□□□ -0.22
SCAMP3-207ENST00000480219 PPP1R1AQ13522 171 aa13.65□□□□□ -0.22
SCAMP3-207ENST00000480219 PHLDA2Q53GA4 152 aa13.65□□□□□ -0.22
SCAMP3-207ENST00000480219 KLF17Q5JT82 389 aaPredicted RBP13.65□□□□□ -0.22
SCAMP3-207ENST00000480219 TBC1D26Q86UD7 250 aa13.65□□□□□ -0.22
SCAMP3-207ENST00000480219 CAPSLQ8WWF8 208 aa13.65□□□□□ -0.22
SCAMP3-207ENST00000480219 AJUBAQ96IF1 538 aa13.65□□□□□ -0.22
SCAMP3-207ENST00000480219 ADTRPQ96IZ2 230 aa13.65□□□□□ -0.22
SCAMP3-207ENST00000480219 DPM3Q9P2X0 92 aa13.65□□□□□ -0.22
SCAMP3-207ENST00000480219 TEX15Q9BXT5 2789 aa13.65□□□□□ -0.22
SCAMP3-207ENST00000480219 IGHV1-69DA0A0B4J2H0 117 aa13.64□□□□□ -0.23
SCAMP3-207ENST00000480219 C9orf170A2RU37 121 aa13.64□□□□□ -0.23
SCAMP3-207ENST00000480219 RNF212BA8MTL3 300 aa13.64□□□□□ -0.23
SCAMP3-207ENST00000480219 LEUTXA8MZ59 168 aa13.64□□□□□ -0.23
SCAMP3-207ENST00000480219 H0Y980 276 aa13.64□□□□□ -0.23
SCAMP3-207ENST00000480219 IGHV1-69P01742 117 aa13.64□□□□□ -0.23
SCAMP3-207ENST00000480219 RPL30P62888 115 aaKnown RBP13.64□□□□□ -0.23
SCAMP3-207ENST00000480219 DHRS2Q13268 280 aa13.64□□□□□ -0.23
SCAMP3-207ENST00000480219 HABP2Q14520 560 aaPredicted RBP13.64□□□□□ -0.23
SCAMP3-207ENST00000480219 TATDN3Q17R31 274 aa13.64□□□□□ -0.23
SCAMP3-207ENST00000480219 RPL39P5Q59GN2 51 aa13.64□□□□□ -0.23
SCAMP3-207ENST00000480219 TPTE2P1Q5T6R2 138 aa13.64□□□□□ -0.23
SCAMP3-207ENST00000480219 LYG2Q86SG7 212 aa13.64□□□□□ -0.23
SCAMP3-207ENST00000480219 SGPP2Q8IWX5 399 aa13.64□□□□□ -0.23
SCAMP3-207ENST00000480219 C18orf12Q96KH6 178 aa13.64□□□□□ -0.23
SCAMP3-207ENST00000480219 A0A0B4J2A0 478 aa13.63□□□□□ -0.23
SCAMP3-207ENST00000480219 LINC00473A8K010 186 aa13.63□□□□□ -0.23
SCAMP3-207ENST00000480219 NPFFO15130 113 aa13.63□□□□□ -0.23
SCAMP3-207ENST00000480219 RBFOX2O43251 390 aaKnown RBP eCLIP13.63□□□□□ -0.23
SCAMP3-207ENST00000480219 SFT2D2O95562 160 aa13.63□□□□□ -0.23
SCAMP3-207ENST00000480219 DUS4LO95620 317 aaKnown RBP13.63□□□□□ -0.23
SCAMP3-207ENST00000480219 CT45A6P0DMU7 189 aa13.63□□□□□ -0.23
SCAMP3-207ENST00000480219 CT45A5P0DMU8 189 aa13.63□□□□□ -0.23
SCAMP3-207ENST00000480219 CT45A7P0DMV0 189 aa13.63□□□□□ -0.23
SCAMP3-207ENST00000480219 FOSL1P15407 271 aa13.63□□□□□ -0.23
SCAMP3-207ENST00000480219 AKR1C4P17516 323 aa13.63□□□□□ -0.23
SCAMP3-207ENST00000480219 UCP1P25874 307 aa13.63□□□□□ -0.23
SCAMP3-207ENST00000480219 CEACAM3P40198 252 aa13.63□□□□□ -0.23
SCAMP3-207ENST00000480219 THBS3P49746 956 aa13.63□□□□□ -0.23
SCAMP3-207ENST00000480219 RAB25P57735 213 aa13.63□□□□□ -0.23
SCAMP3-207ENST00000480219 BRWD1-AS2P59051 145 aa13.63□□□□□ -0.23
SCAMP3-207ENST00000480219 TAGLNQ01995 201 aaKnown RBP13.63□□□□□ -0.23
SCAMP3-207ENST00000480219 CATR1Q13166 79 aa13.63□□□□□ -0.23
SCAMP3-207ENST00000480219 C11orf88Q6PI97 169 aa13.63□□□□□ -0.23
SCAMP3-207ENST00000480219 NABP2Q9BQ15 211 aa13.63□□□□□ -0.23
SCAMP3-207ENST00000480219 TMUB1Q9BVT8 246 aa13.63□□□□□ -0.23
SCAMP3-207ENST00000480219 LIN7CQ9NUP9 197 aaKnown RBP13.63□□□□□ -0.23
SCAMP3-207ENST00000480219 SHPKQ9UHJ6 478 aa13.63□□□□□ -0.23
SCAMP3-207ENST00000480219 ABCA1O95477 2261 aa13.62□□□□□ -0.23
SCAMP3-207ENST00000480219 SVEP1Q4LDE5 3571 aa13.62□□□□□ -0.23
SCAMP3-207ENST00000480219 C3orf85A0A1B0GTC6 90 aa13.62□□□□□ -0.23
SCAMP3-207ENST00000480219 M0R1X1 148 aa13.62□□□□□ -0.23
SCAMP3-207ENST00000480219 SMAD7O15105 426 aaKnown RBP13.62□□□□□ -0.23
SCAMP3-207ENST00000480219 GAPDHP04406 335 aaKnown RBP13.62□□□□□ -0.23
SCAMP3-207ENST00000480219 TMEM187Q14656 261 aa13.62□□□□□ -0.23
SCAMP3-207ENST00000480219 GPR157Q5UAW9 335 aa13.62□□□□□ -0.23
SCAMP3-207ENST00000480219 TGIF2LXQ8IUE1 241 aa13.62□□□□□ -0.23
SCAMP3-207ENST00000480219 OR8H3Q8N146 312 aa13.62□□□□□ -0.23
SCAMP3-207ENST00000480219 PIP4P2Q8N4L2 257 aa13.62□□□□□ -0.23
SCAMP3-207ENST00000480219 TEX29Q8N6K0 151 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms