RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 KIR2DS1Q14954 304 aa18.34■□□□□ 0.53
C9orf3-215ENST00000478473 ARL6IP1Q15041 203 aa18.34■□□□□ 0.53
C9orf3-215ENST00000478473 CXorf66Q5JRM2 361 aaPredicted RBP18.34■□□□□ 0.53
C9orf3-215ENST00000478473 FAM131AQ6UXB0 335 aa18.34■□□□□ 0.53
C9orf3-215ENST00000478473 C8orf86Q6ZUL3 223 aa18.34■□□□□ 0.53
C9orf3-215ENST00000478473 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.34■□□□□ 0.53
C9orf3-215ENST00000478473 OR51J1Q9H342 316 aa18.34■□□□□ 0.53
C9orf3-215ENST00000478473 TRBV6-7A0A0A0MS04 114 aa18.33■□□□□ 0.52
C9orf3-215ENST00000478473 FABP7O15540 132 aa18.33■□□□□ 0.52
C9orf3-215ENST00000478473 RPLP1P05386 114 aaKnown RBP18.33■□□□□ 0.52
C9orf3-215ENST00000478473 SLC2A2P11168 524 aaPredicted RBP18.33■□□□□ 0.52
C9orf3-215ENST00000478473 EGFEM1PQ0D2K5 195 aa18.33■□□□□ 0.52
C9orf3-215ENST00000478473 LIN54Q6MZP7 749 aa18.33■□□□□ 0.52
C9orf3-215ENST00000478473 KLHL30-AS1Q8NEE0 82 aa18.33■□□□□ 0.52
C9orf3-215ENST00000478473 KCTD7Q96MP8 289 aa18.33■□□□□ 0.52
C9orf3-215ENST00000478473 CENPOQ9BU64 300 aa18.33■□□□□ 0.52
C9orf3-215ENST00000478473 RDH8Q9NYR8 311 aa18.33■□□□□ 0.52
C9orf3-215ENST00000478473 WASHC3Q9Y3C0 194 aa18.33■□□□□ 0.52
C9orf3-215ENST00000478473 IGLV1-40P01703 118 aa18.32■□□□□ 0.52
C9orf3-215ENST00000478473 MRPS15P82914 257 aaKnown RBP18.32■□□□□ 0.52
C9orf3-215ENST00000478473 KCTD21Q4G0X4 260 aa18.32■□□□□ 0.52
C9orf3-215ENST00000478473 C19orf54Q5BKX5 351 aa18.32■□□□□ 0.52
C9orf3-215ENST00000478473 GPR61Q9BZJ8 451 aa18.32■□□□□ 0.52
C9orf3-215ENST00000478473 AURKAIP1Q9NWT8 199 aaPredicted RBP18.32■□□□□ 0.52
C9orf3-215ENST00000478473 A0A0B4J203 849 aa18.31■□□□□ 0.52
C9orf3-215ENST00000478473 RRHO14718 337 aa18.31■□□□□ 0.52
C9orf3-215ENST00000478473 PRB2P02812 416 aaPredicted RBP18.31■□□□□ 0.52
C9orf3-215ENST00000478473 GNB3P16520 340 aa18.31■□□□□ 0.52
C9orf3-215ENST00000478473 ZNF660Q6AZW8 331 aaPredicted RBP18.31■□□□□ 0.52
C9orf3-215ENST00000478473 MINDY2Q8NBR6 621 aa18.31■□□□□ 0.52
C9orf3-215ENST00000478473 MCRIP2Q9BUT9 160 aaKnown RBP18.31■□□□□ 0.52
C9orf3-215ENST00000478473 KIAA1456Q9P272 454 aa18.31■□□□□ 0.52
C9orf3-215ENST00000478473 SSR3Q9UNL2 185 aa18.31■□□□□ 0.52
C9orf3-215ENST00000478473 NUDT19A8MXV4 375 aa18.3■□□□□ 0.52
C9orf3-215ENST00000478473 ATP6V0E1O15342 81 aa18.3■□□□□ 0.52
C9orf3-215ENST00000478473 SCAND1P57086 179 aa18.3■□□□□ 0.52
C9orf3-215ENST00000478473 KIAA0141Q14154 515 aaPredicted RBP18.3■□□□□ 0.52
C9orf3-215ENST00000478473 ZNF383Q8NA42 475 aa18.3■□□□□ 0.52
C9orf3-215ENST00000478473 RAX2Q96IS3 184 aa18.3■□□□□ 0.52
C9orf3-215ENST00000478473 ZNF221Q9UK13 617 aa18.3■□□□□ 0.52
C9orf3-215ENST00000478473 CCL24O00175 119 aa18.29■□□□□ 0.52
C9orf3-215ENST00000478473 GSTT2P0CG29 244 aa18.29■□□□□ 0.52
C9orf3-215ENST00000478473 GSTT2BP0CG30 244 aa18.29■□□□□ 0.52
C9orf3-215ENST00000478473 DTYMKP23919 212 aa18.29■□□□□ 0.52
C9orf3-215ENST00000478473 IGSF11Q5DX21 431 aa18.29■□□□□ 0.52
C9orf3-215ENST00000478473 GLDNQ6ZMI3 551 aaPredicted RBP18.29■□□□□ 0.52
C9orf3-215ENST00000478473 LCNL1Q6ZST4 164 aa18.29■□□□□ 0.52
C9orf3-215ENST00000478473 RNF150Q9ULK6 438 aa18.29■□□□□ 0.52
C9orf3-215ENST00000478473 SCGNO76038 276 aa18.28■□□□□ 0.52
C9orf3-215ENST00000478473 SPDEFO95238 335 aa18.28■□□□□ 0.52
C9orf3-215ENST00000478473 TFAP2AP05549 437 aa18.28■□□□□ 0.52
C9orf3-215ENST00000478473 NDPQ00604 133 aa18.28■□□□□ 0.52
C9orf3-215ENST00000478473 RUNX1Q01196 453 aa18.28■□□□□ 0.52
C9orf3-215ENST00000478473 FHL3Q13643 280 aa18.28■□□□□ 0.52
C9orf3-215ENST00000478473 PDPNQ86YL7 162 aa18.28■□□□□ 0.52
C9orf3-215ENST00000478473 OR8U1Q8NH10 309 aa18.28■□□□□ 0.52
C9orf3-215ENST00000478473 OR10J5Q8NHC4 309 aa18.28■□□□□ 0.52
C9orf3-215ENST00000478473 C4orf3Q8WVX3 66 aa18.28■□□□□ 0.52
C9orf3-215ENST00000478473 UBE2E2Q96LR5 201 aa18.28■□□□□ 0.52
C9orf3-215ENST00000478473 OR51E2Q9H255 320 aa18.28■□□□□ 0.52
C9orf3-215ENST00000478473 TRAV41A0A0B4J266 112 aa18.27■□□□□ 0.52
C9orf3-215ENST00000478473 G3V318 75 aa18.27■□□□□ 0.52
C9orf3-215ENST00000478473 CX3CL1P78423 397 aa18.27■□□□□ 0.52
C9orf3-215ENST00000478473 SFXN4Q6P4A7 337 aa18.27■□□□□ 0.52
C9orf3-215ENST00000478473 TCTEX1D1Q8N7M0 179 aa18.27■□□□□ 0.52
C9orf3-215ENST00000478473 ATG5Q9H1Y0 275 aa18.27■□□□□ 0.52
C9orf3-215ENST00000478473 FBXL15Q9H469 300 aa18.27■□□□□ 0.52
C9orf3-215ENST00000478473 NUBP2Q9Y5Y2 271 aa18.27■□□□□ 0.52
C9orf3-215ENST00000478473 H7C2Y5 167 aa18.26■□□□□ 0.51
C9orf3-215ENST00000478473 IGKV1-16P04430 117 aa18.26■□□□□ 0.51
C9orf3-215ENST00000478473 GSTP1P09211 210 aaKnown RBP18.26■□□□□ 0.51
C9orf3-215ENST00000478473 EGR2P11161 476 aaPredicted RBP18.26■□□□□ 0.51
C9orf3-215ENST00000478473 SDC2P34741 201 aa18.26■□□□□ 0.51
C9orf3-215ENST00000478473 ARFRP1Q13795 201 aa18.26■□□□□ 0.51
C9orf3-215ENST00000478473 PSG5Q15238 335 aa18.26■□□□□ 0.51
C9orf3-215ENST00000478473 HACD4Q5VWC8 232 aa18.26■□□□□ 0.51
C9orf3-215ENST00000478473 ZNF491Q8N8L2 437 aa18.26■□□□□ 0.51
C9orf3-215ENST00000478473 DRAXINQ8NBI3 349 aaPredicted RBP18.26■□□□□ 0.51
C9orf3-215ENST00000478473 TSNAXQ99598 290 aaKnown RBP18.26■□□□□ 0.51
C9orf3-215ENST00000478473 DCSTAMPQ9H295 470 aa18.26■□□□□ 0.51
C9orf3-215ENST00000478473 KLK15Q9H2R5 256 aa18.26■□□□□ 0.51
C9orf3-215ENST00000478473 PARP11Q9NR21 331 aa18.26■□□□□ 0.51
C9orf3-215ENST00000478473 SDHAF2Q9NX18 166 aa18.26■□□□□ 0.51
C9orf3-215ENST00000478473 ZNF230Q9UIE0 474 aaPredicted RBP18.26■□□□□ 0.51
C9orf3-215ENST00000478473 FBXO7Q9Y3I1 522 aa18.26■□□□□ 0.51
C9orf3-215ENST00000478473 WSB1Q9Y6I7 421 aa18.26■□□□□ 0.51
C9orf3-215ENST00000478473 SMIM30A4D0T7 59 aa18.25■□□□□ 0.51
C9orf3-215ENST00000478473 FCN1O00602 326 aa18.25■□□□□ 0.51
C9orf3-215ENST00000478473 BET1O15155 118 aa18.25■□□□□ 0.51
C9orf3-215ENST00000478473 TMEM127O75204 238 aa18.25■□□□□ 0.51
C9orf3-215ENST00000478473 LINC00205P59089 165 aa18.25■□□□□ 0.51
C9orf3-215ENST00000478473 KRTAP10-11P60412 298 aa18.25■□□□□ 0.51
C9orf3-215ENST00000478473 TAGLNQ01995 201 aaKnown RBP18.25■□□□□ 0.51
C9orf3-215ENST00000478473 CDNFQ49AH0 187 aa18.25■□□□□ 0.51
C9orf3-215ENST00000478473 ZNF562Q6V9R5 426 aa18.25■□□□□ 0.51
C9orf3-215ENST00000478473 H1FOOQ8IZA3 346 aaPredicted RBP18.25■□□□□ 0.51
C9orf3-215ENST00000478473 MRAPQ8TCY5 172 aa18.25■□□□□ 0.51
C9orf3-215ENST00000478473 DAPK2Q9UIK4 370 aa18.25■□□□□ 0.51
C9orf3-215ENST00000478473 RRP15Q9Y3B9 282 aaKnown RBP18.25■□□□□ 0.51
C9orf3-215ENST00000478473 A0A075B6Q4 140 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms