RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 GPR146Q96CH1 333 aa6.59□□□□□ -1.35
VMA21-203ENST00000477649 CIB3Q96Q77 187 aaPredicted RBP6.59□□□□□ -1.35
VMA21-203ENST00000477649 AGMATQ9BSE5 352 aa6.59□□□□□ -1.35
VMA21-203ENST00000477649 RAB1BQ9H0U4 201 aa6.59□□□□□ -1.35
VMA21-203ENST00000477649 ARV1Q9H2C2 271 aa6.59□□□□□ -1.35
VMA21-203ENST00000477649 C11orf1Q9H5F2 150 aa6.59□□□□□ -1.35
VMA21-203ENST00000477649 CYTL1Q9NRR1 136 aa6.59□□□□□ -1.35
VMA21-203ENST00000477649 LYRM2Q9NU23 88 aaPredicted RBP6.59□□□□□ -1.35
VMA21-203ENST00000477649 IDI2-AS1Q9NZ38 188 aa6.59□□□□□ -1.35
VMA21-203ENST00000477649 SLC25A10Q9UBX3 287 aaPredicted RBP6.59□□□□□ -1.35
VMA21-203ENST00000477649 SHANK1Q9Y566 2161 aa6.58□□□□□ -1.36
VMA21-203ENST00000477649 SETXQ7Z333 2677 aaKnown RBP6.58□□□□□ -1.36
VMA21-203ENST00000477649 IGHV3OR15-7A0A075B7D8 119 aa6.58□□□□□ -1.36
VMA21-203ENST00000477649 MSGN1A6NI15 193 aa6.58□□□□□ -1.36
VMA21-203ENST00000477649 LEUTXA8MZ59 168 aa6.58□□□□□ -1.36
VMA21-203ENST00000477649 KRBOX1C9JBD0 128 aa6.58□□□□□ -1.36
VMA21-203ENST00000477649 TNFRSF13BO14836 293 aaPredicted RBP6.58□□□□□ -1.36
VMA21-203ENST00000477649 TMPRSS2O15393 492 aa6.58□□□□□ -1.36
VMA21-203ENST00000477649 FGF16O43320 207 aa6.58□□□□□ -1.36
VMA21-203ENST00000477649 ZG16O60844 167 aa6.58□□□□□ -1.36
VMA21-203ENST00000477649 HPRT1P00492 218 aa6.58□□□□□ -1.36
VMA21-203ENST00000477649 GYPAP02724 150 aa6.58□□□□□ -1.36
VMA21-203ENST00000477649 SEC11BP0C7V7 166 aa6.58□□□□□ -1.36
VMA21-203ENST00000477649 DAOP14920 347 aa6.58□□□□□ -1.36
VMA21-203ENST00000477649 PPP1CCP36873 323 aaKnown RBP6.58□□□□□ -1.36
VMA21-203ENST00000477649 LPAR6P43657 344 aa6.58□□□□□ -1.36
VMA21-203ENST00000477649 THBS3P49746 956 aa6.58□□□□□ -1.36
VMA21-203ENST00000477649 BLOC1S1P78537 153 aa6.58□□□□□ -1.36
VMA21-203ENST00000477649 C17orf58Q2M2W7 97 aa6.58□□□□□ -1.36
VMA21-203ENST00000477649 MST1LQ2TV78 715 aa6.58□□□□□ -1.36
VMA21-203ENST00000477649 ZNF585BQ52M93 769 aa6.58□□□□□ -1.36
VMA21-203ENST00000477649 DHRS7BQ6IAN0 325 aaPredicted RBP6.58□□□□□ -1.36
VMA21-203ENST00000477649 FAM71F2Q6NXP2 309 aa6.58□□□□□ -1.36
VMA21-203ENST00000477649 UQCC3Q6UW78 93 aa6.58□□□□□ -1.36
VMA21-203ENST00000477649 STX12Q86Y82 276 aa6.58□□□□□ -1.36
VMA21-203ENST00000477649 FOXRED2Q8IWF2 684 aa6.58□□□□□ -1.36
VMA21-203ENST00000477649 SPAG16Q8N0X2 631 aa6.58□□□□□ -1.36
VMA21-203ENST00000477649 FGFRL1Q8N441 504 aa6.58□□□□□ -1.36
VMA21-203ENST00000477649 TCTEX1D2Q8WW35 142 aa6.58□□□□□ -1.36
VMA21-203ENST00000477649 SMIM8Q96KF7 97 aa6.58□□□□□ -1.36
VMA21-203ENST00000477649 CCL13Q99616 98 aa6.58□□□□□ -1.36
VMA21-203ENST00000477649 ABHD14AQ9BUJ0 271 aa6.58□□□□□ -1.36
VMA21-203ENST00000477649 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.58□□□□□ -1.36
VMA21-203ENST00000477649 SDHAF2Q9NX18 166 aa6.58□□□□□ -1.36
VMA21-203ENST00000477649 FBXL17Q9UF56 701 aa6.58□□□□□ -1.36
VMA21-203ENST00000477649 RPUSD1Q9UJJ7 312 aaKnown RBP6.58□□□□□ -1.36
VMA21-203ENST00000477649 PSG11Q9UQ72 335 aa6.58□□□□□ -1.36
VMA21-203ENST00000477649 RCL1Q9Y2P8 373 aaKnown RBP6.58□□□□□ -1.36
VMA21-203ENST00000477649 ESPL1Q14674 2120 aa6.58□□□□□ -1.36
VMA21-203ENST00000477649 HEATR1Q9H583 2144 aaKnown RBP6.58□□□□□ -1.36
VMA21-203ENST00000477649 PKD1L2Q7Z442 2459 aa6.57□□□□□ -1.36
VMA21-203ENST00000477649 RAB19A4D1S5 217 aa6.57□□□□□ -1.36
VMA21-203ENST00000477649 DEFB108AA8MXU0 73 aa6.57□□□□□ -1.36
VMA21-203ENST00000477649 UMAD1C9J7I0 102 aa6.57□□□□□ -1.36
VMA21-203ENST00000477649 TEX46H3BTG2 121 aa6.57□□□□□ -1.36
VMA21-203ENST00000477649 SYNGR2O43760 224 aa6.57□□□□□ -1.36
VMA21-203ENST00000477649 P0C879 139 aa6.57□□□□□ -1.36
VMA21-203ENST00000477649 ZNF16P17020 682 aaPredicted RBP6.57□□□□□ -1.36
VMA21-203ENST00000477649 DUTP33316 252 aaKnown RBP6.57□□□□□ -1.36
VMA21-203ENST00000477649 SULT1A2P50226 295 aa6.57□□□□□ -1.36
VMA21-203ENST00000477649 CAV2P51636 162 aa6.57□□□□□ -1.36
VMA21-203ENST00000477649 ERVK-16P61578 105 aa6.57□□□□□ -1.36
VMA21-203ENST00000477649 POLR2GP62487 172 aaKnown RBP eCLIP6.57□□□□□ -1.36
VMA21-203ENST00000477649 RPL31P62899 125 aaKnown RBP6.57□□□□□ -1.36
VMA21-203ENST00000477649 HBG1P69891 147 aa6.57□□□□□ -1.36
VMA21-203ENST00000477649 HBG2P69892 147 aa6.57□□□□□ -1.36
VMA21-203ENST00000477649 RPP30P78346 268 aaKnown RBP6.57□□□□□ -1.36
VMA21-203ENST00000477649 EWSR1Q01844 656 aaKnown RBP eCLIP6.57□□□□□ -1.36
VMA21-203ENST00000477649 TFF3Q07654 80 aa6.57□□□□□ -1.36
VMA21-203ENST00000477649 AARDQ4LEZ3 155 aa6.57□□□□□ -1.36
VMA21-203ENST00000477649 SPRNQ5BIV9 151 aa6.57□□□□□ -1.36
VMA21-203ENST00000477649 HEPN1Q6WQI6 88 aa6.57□□□□□ -1.36
VMA21-203ENST00000477649 H2BFWTQ7Z2G1 175 aa6.57□□□□□ -1.36
VMA21-203ENST00000477649 C5orf24Q7Z6I8 188 aa6.57□□□□□ -1.36
VMA21-203ENST00000477649 ZGRF1Q86YA3 2104 aa6.57□□□□□ -1.36
VMA21-203ENST00000477649 STPG2Q8N412 459 aa6.57□□□□□ -1.36
VMA21-203ENST00000477649 COMMD1Q8N668 190 aa6.57□□□□□ -1.36
VMA21-203ENST00000477649 TMEM252Q8N6L7 170 aa6.57□□□□□ -1.36
VMA21-203ENST00000477649 TPRX1Q8N7U7 411 aa6.57□□□□□ -1.36
VMA21-203ENST00000477649 DEFB108BQ8NET1 73 aa6.57□□□□□ -1.36
VMA21-203ENST00000477649 OR4S2Q8NH73 311 aa6.57□□□□□ -1.36
VMA21-203ENST00000477649 RFESDQ8TAC1 157 aa6.57□□□□□ -1.36
VMA21-203ENST00000477649 LINC01560Q8TB33 94 aa6.57□□□□□ -1.36
VMA21-203ENST00000477649 CCL17Q92583 94 aa6.57□□□□□ -1.36
VMA21-203ENST00000477649 TNFRSF14Q92956 283 aa6.57□□□□□ -1.36
VMA21-203ENST00000477649 GNPNAT1Q96EK6 184 aaPredicted RBP6.57□□□□□ -1.36
VMA21-203ENST00000477649 CITED4Q96RK1 184 aa6.57□□□□□ -1.36
VMA21-203ENST00000477649 S1PR3Q99500 378 aa6.57□□□□□ -1.36
VMA21-203ENST00000477649 GINS3Q9BRX5 216 aa6.57□□□□□ -1.36
VMA21-203ENST00000477649 CBLN4Q9NTU7 201 aa6.57□□□□□ -1.36
VMA21-203ENST00000477649 CACNG5Q9UF02 275 aa6.57□□□□□ -1.36
VMA21-203ENST00000477649 STRAPQ9Y3F4 350 aaKnown RBP6.57□□□□□ -1.36
VMA21-203ENST00000477649 POLEQ07864 2286 aa6.56□□□□□ -1.36
VMA21-203ENST00000477649 MFSD2BA6NFX1 497 aa6.56□□□□□ -1.36
VMA21-203ENST00000477649 TRIM77I1YAP6 450 aa6.56□□□□□ -1.36
VMA21-203ENST00000477649 CHST1O43916 411 aa6.56□□□□□ -1.36
VMA21-203ENST00000477649 SSSCA1O60232 199 aa6.56□□□□□ -1.36
VMA21-203ENST00000477649 IGKV1-39P01597 117 aa6.56□□□□□ -1.36
VMA21-203ENST00000477649 IGKV1-5P01602 117 aa6.56□□□□□ -1.36
VMA21-203ENST00000477649 RBP4P02753 201 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms