RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 RDH8Q9NYR8 311 aa17.05■□□□□ 0.32
COL9A3-211ENST00000477612 TRBV6-7A0A0A0MS04 114 aa17.04■□□□□ 0.32
COL9A3-211ENST00000477612 IGHV7-81A0A0B4J1V7 117 aa17.04■□□□□ 0.32
COL9A3-211ENST00000477612 RBBP9O75884 186 aa17.04■□□□□ 0.32
COL9A3-211ENST00000477612 OR5H8P0DN80 308 aa17.04■□□□□ 0.32
COL9A3-211ENST00000477612 CXorf66Q5JRM2 361 aaPredicted RBP17.04■□□□□ 0.32
COL9A3-211ENST00000477612 FOXB2Q5VYV0 432 aa17.04■□□□□ 0.32
COL9A3-211ENST00000477612 LIN54Q6MZP7 749 aa17.04■□□□□ 0.32
COL9A3-211ENST00000477612 C8orf86Q6ZUL3 223 aa17.04■□□□□ 0.32
COL9A3-211ENST00000477612 ZNF695Q8IW36 515 aa17.04■□□□□ 0.32
COL9A3-211ENST00000477612 MRPL41Q8IXM3 137 aaKnown RBP17.04■□□□□ 0.32
COL9A3-211ENST00000477612 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.04■□□□□ 0.32
COL9A3-211ENST00000477612 KCTD7Q96MP8 289 aa17.04■□□□□ 0.32
COL9A3-211ENST00000477612 P2RX4Q99571 388 aa17.04■□□□□ 0.32
COL9A3-211ENST00000477612 CENPOQ9BU64 300 aa17.04■□□□□ 0.32
COL9A3-211ENST00000477612 OR51J1Q9H342 316 aa17.04■□□□□ 0.32
COL9A3-211ENST00000477612 KIAA1456Q9P272 454 aa17.04■□□□□ 0.32
COL9A3-211ENST00000477612 RRP15Q9Y3B9 282 aaKnown RBP17.04■□□□□ 0.32
COL9A3-211ENST00000477612 RPLP1P05386 114 aaKnown RBP17.03■□□□□ 0.32
COL9A3-211ENST00000477612 GSTT2P0CG29 244 aa17.03■□□□□ 0.32
COL9A3-211ENST00000477612 GSTT2BP0CG30 244 aa17.03■□□□□ 0.32
COL9A3-211ENST00000477612 VDAC1P21796 283 aa17.03■□□□□ 0.32
COL9A3-211ENST00000477612 PSMB8P28062 276 aa17.03■□□□□ 0.32
COL9A3-211ENST00000477612 GLDNQ6ZMI3 551 aaPredicted RBP17.03■□□□□ 0.32
COL9A3-211ENST00000477612 KLHL30-AS1Q8NEE0 82 aa17.03■□□□□ 0.32
COL9A3-211ENST00000477612 ZNF221Q9UK13 617 aa17.03■□□□□ 0.32
COL9A3-211ENST00000477612 RNF150Q9ULK6 438 aa17.03■□□□□ 0.32
COL9A3-211ENST00000477612 WASHC3Q9Y3C0 194 aa17.03■□□□□ 0.32
COL9A3-211ENST00000477612 SMIM30A4D0T7 59 aa17.02■□□□□ 0.32
COL9A3-211ENST00000477612 RRHO14718 337 aa17.02■□□□□ 0.32
COL9A3-211ENST00000477612 CRIP2P52943 208 aaPredicted RBP17.02■□□□□ 0.32
COL9A3-211ENST00000477612 IGSF11Q5DX21 431 aa17.02■□□□□ 0.32
COL9A3-211ENST00000477612 SFXN4Q6P4A7 337 aa17.02■□□□□ 0.32
COL9A3-211ENST00000477612 MYOZ3Q8TDC0 251 aa17.02■□□□□ 0.32
COL9A3-211ENST00000477612 ATG5Q9H1Y0 275 aa17.02■□□□□ 0.32
COL9A3-211ENST00000477612 ATP6V0E1O15342 81 aa17.01■□□□□ 0.31
COL9A3-211ENST00000477612 DTYMKP23919 212 aa17.01■□□□□ 0.31
COL9A3-211ENST00000477612 SCAND1P57086 179 aa17.01■□□□□ 0.31
COL9A3-211ENST00000477612 ZNF660Q6AZW8 331 aaPredicted RBP17.01■□□□□ 0.31
COL9A3-211ENST00000477612 OR10J5Q8NHC4 309 aa17.01■□□□□ 0.31
COL9A3-211ENST00000477612 ZNF230Q9UIE0 474 aaPredicted RBP17.01■□□□□ 0.31
COL9A3-211ENST00000477612 A0A075B6Q4 140 aa17■□□□□ 0.31
COL9A3-211ENST00000477612 NUDT19A8MXV4 375 aa17■□□□□ 0.31
COL9A3-211ENST00000477612 SCGNO76038 276 aa17■□□□□ 0.31
COL9A3-211ENST00000477612 IGLV1-40P01703 118 aa17■□□□□ 0.31
COL9A3-211ENST00000477612 TFAP2AP05549 437 aa17■□□□□ 0.31
COL9A3-211ENST00000477612 GSTP1P09211 210 aaKnown RBP17■□□□□ 0.31
COL9A3-211ENST00000477612 SDC2P34741 201 aa17■□□□□ 0.31
COL9A3-211ENST00000477612 ARFRP1Q13795 201 aa17■□□□□ 0.31
COL9A3-211ENST00000477612 CDNFQ49AH0 187 aa17■□□□□ 0.31
COL9A3-211ENST00000477612 LCNL1Q6ZST4 164 aa17■□□□□ 0.31
COL9A3-211ENST00000477612 ZNF383Q8NA42 475 aa17■□□□□ 0.31
COL9A3-211ENST00000477612 AURKAIP1Q9NWT8 199 aaPredicted RBP17■□□□□ 0.31
COL9A3-211ENST00000477612 DAPK2Q9UIK4 370 aa17■□□□□ 0.31
COL9A3-211ENST00000477612 H7C2Y5 167 aa16.99■□□□□ 0.31
COL9A3-211ENST00000477612 BET1O15155 118 aa16.99■□□□□ 0.31
COL9A3-211ENST00000477612 PRB2P02812 416 aaPredicted RBP16.99■□□□□ 0.31
COL9A3-211ENST00000477612 CD36P16671 472 aa16.99■□□□□ 0.31
COL9A3-211ENST00000477612 TALDO1P37837 337 aa16.99■□□□□ 0.31
COL9A3-211ENST00000477612 KIAA0141Q14154 515 aaPredicted RBP16.99■□□□□ 0.31
COL9A3-211ENST00000477612 C19orf54Q5BKX5 351 aa16.99■□□□□ 0.31
COL9A3-211ENST00000477612 HACD4Q5VWC8 232 aa16.99■□□□□ 0.31
COL9A3-211ENST00000477612 PDPNQ86YL7 162 aa16.99■□□□□ 0.31
COL9A3-211ENST00000477612 DRAXINQ8NBI3 349 aaPredicted RBP16.99■□□□□ 0.31
COL9A3-211ENST00000477612 MINDY2Q8NBR6 621 aa16.99■□□□□ 0.31
COL9A3-211ENST00000477612 RAX2Q96IS3 184 aa16.99■□□□□ 0.31
COL9A3-211ENST00000477612 GPR61Q9BZJ8 451 aa16.99■□□□□ 0.31
COL9A3-211ENST00000477612 FBXL15Q9H469 300 aa16.99■□□□□ 0.31
COL9A3-211ENST00000477612 ELF5Q9UKW6 265 aaPredicted RBP16.99■□□□□ 0.31
COL9A3-211ENST00000477612 TRAV41A0A0B4J266 112 aa16.98■□□□□ 0.31
COL9A3-211ENST00000477612 G3V318 75 aa16.98■□□□□ 0.31
COL9A3-211ENST00000477612 CCL24O00175 119 aa16.98■□□□□ 0.31
COL9A3-211ENST00000477612 TMEM127O75204 238 aa16.98■□□□□ 0.31
COL9A3-211ENST00000477612 SPDEFO95238 335 aa16.98■□□□□ 0.31
COL9A3-211ENST00000477612 OR8U9P0C7N5 309 aa16.98■□□□□ 0.31
COL9A3-211ENST00000477612 LINC00205P59089 165 aa16.98■□□□□ 0.31
COL9A3-211ENST00000477612 EGFEM1PQ0D2K5 195 aa16.98■□□□□ 0.31
COL9A3-211ENST00000477612 NEDD8Q15843 81 aa16.98■□□□□ 0.31
COL9A3-211ENST00000477612 ZNF260Q3ZCT1 412 aa16.98■□□□□ 0.31
COL9A3-211ENST00000477612 OR8U1Q8NH10 309 aa16.98■□□□□ 0.31
COL9A3-211ENST00000477612 MAFIPQ8WZ33 124 aa16.98■□□□□ 0.31
COL9A3-211ENST00000477612 MCRIP2Q9BUT9 160 aaKnown RBP16.98■□□□□ 0.31
COL9A3-211ENST00000477612 DCSTAMPQ9H295 470 aa16.98■□□□□ 0.31
COL9A3-211ENST00000477612 RNF167Q9H6Y7 350 aa16.98■□□□□ 0.31
COL9A3-211ENST00000477612 SDHAF2Q9NX18 166 aa16.98■□□□□ 0.31
COL9A3-211ENST00000477612 NUBP2Q9Y5Y2 271 aa16.98■□□□□ 0.31
COL9A3-211ENST00000477612 WSB1Q9Y6I7 421 aa16.98■□□□□ 0.31
COL9A3-211ENST00000477612 IGKV1D-8A0A087WSZ0 117 aa16.97■□□□□ 0.31
COL9A3-211ENST00000477612 FCN1O00602 326 aa16.97■□□□□ 0.31
COL9A3-211ENST00000477612 IGKV1-16P04430 117 aa16.97■□□□□ 0.31
COL9A3-211ENST00000477612 SNRPBP14678 240 aaKnown RBP16.97■□□□□ 0.31
COL9A3-211ENST00000477612 CX3CL1P78423 397 aa16.97■□□□□ 0.31
COL9A3-211ENST00000477612 PITPNAQ00169 270 aa16.97■□□□□ 0.31
COL9A3-211ENST00000477612 NDPQ00604 133 aa16.97■□□□□ 0.31
COL9A3-211ENST00000477612 PSG5Q15238 335 aa16.97■□□□□ 0.31
COL9A3-211ENST00000477612 H1FOOQ8IZA3 346 aaPredicted RBP16.97■□□□□ 0.31
COL9A3-211ENST00000477612 LGALS14Q8TCE9 139 aa16.97■□□□□ 0.31
COL9A3-211ENST00000477612 C4orf3Q8WVX3 66 aa16.97■□□□□ 0.31
COL9A3-211ENST00000477612 UBE2E2Q96LR5 201 aa16.97■□□□□ 0.31
COL9A3-211ENST00000477612 TSNAXQ99598 290 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms