RNA–Protein interactions for RNA: ENST00000477334.1

RBM39-231, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 949 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-231	ENST00000477334	MAL2	Q969L2	176 aa		1.99	□□□□□ -2.09
RBM39-231	ENST00000477334	PYURF	Q96I23	114 aa		1.99	□□□□□ -2.09
RBM39-231	ENST00000477334	CEP19	Q96LK0	163 aa		1.99	□□□□□ -2.09
RBM39-231	ENST00000477334	OR2V2	Q96R30	315 aa		1.99	□□□□□ -2.09
RBM39-231	ENST00000477334	TMEM109	Q9BVC6	243 aa		1.99	□□□□□ -2.09
RBM39-231	ENST00000477334	ALX4	Q9H161	411 aa	Predicted RBP	1.99	□□□□□ -2.09
RBM39-231	ENST00000477334	GLTP	Q9NZD2	209 aa		1.99	□□□□□ -2.09
RBM39-231	ENST00000477334	VPS29	Q9UBQ0	182 aa		1.99	□□□□□ -2.09
RBM39-231	ENST00000477334	STOML2	Q9UJZ1	356 aa		1.99	□□□□□ -2.09
RBM39-231	ENST00000477334	CARHSP1	Q9Y2V2	147 aa	Known RBP	1.99	□□□□□ -2.09
RBM39-231	ENST00000477334	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	1.99	□□□□□ -2.09
RBM39-231	ENST00000477334	ICOS	Q9Y6W8	199 aa		1.99	□□□□□ -2.09
RBM39-231	ENST00000477334	TTC21A	Q8NDW8	1320 aa		1.98	□□□□□ -2.09
RBM39-231	ENST00000477334	CACNA1D	Q01668	2161 aa		1.98	□□□□□ -2.09
RBM39-231	ENST00000477334		A0A1B0GV50	99 aa		1.98	□□□□□ -2.09
RBM39-231	ENST00000477334		A6NED7	52 aa		1.98	□□□□□ -2.09
RBM39-231	ENST00000477334	CLDN24	A6NM45	220 aa		1.98	□□□□□ -2.09
RBM39-231	ENST00000477334	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	1.98	□□□□□ -2.09
RBM39-231	ENST00000477334	GSTZ1	O43708	216 aa	Predicted RBP	1.98	□□□□□ -2.09
RBM39-231	ENST00000477334	NSA2	O95478	260 aa	Known RBP	1.98	□□□□□ -2.09
RBM39-231	ENST00000477334	IGLV6-57	P01721	117 aa		1.98	□□□□□ -2.09
RBM39-231	ENST00000477334	REG1A	P05451	166 aa		1.98	□□□□□ -2.09
RBM39-231	ENST00000477334	ALOX5AP	P20292	161 aa		1.98	□□□□□ -2.09
RBM39-231	ENST00000477334	PRPS1L1	P21108	318 aa		1.98	□□□□□ -2.09
RBM39-231	ENST00000477334	ATP6V0C	P27449	155 aa		1.98	□□□□□ -2.09
RBM39-231	ENST00000477334	PPP1CC	P36873	323 aa	Known RBP	1.98	□□□□□ -2.09
RBM39-231	ENST00000477334	OR1E2	P47887	323 aa		1.98	□□□□□ -2.09
RBM39-231	ENST00000477334	CDK9	P50750	372 aa	Known RBP	1.98	□□□□□ -2.09
RBM39-231	ENST00000477334	AKR1C2	P52895	323 aa		1.98	□□□□□ -2.09
RBM39-231	ENST00000477334	RAB5B	P61020	215 aa		1.98	□□□□□ -2.09
RBM39-231	ENST00000477334	RPS24	P62847	133 aa	Known RBP	1.98	□□□□□ -2.09
RBM39-231	ENST00000477334	APOF	Q13790	326 aa		1.98	□□□□□ -2.09
RBM39-231	ENST00000477334	CASP8	Q14790	479 aa		1.98	□□□□□ -2.09
RBM39-231	ENST00000477334	C5orf46	Q6UWT4	87 aa		1.98	□□□□□ -2.09
RBM39-231	ENST00000477334	ADM2	Q7Z4H4	148 aa		1.98	□□□□□ -2.09
RBM39-231	ENST00000477334	BAP18	Q8IXM2	172 aa		1.98	□□□□□ -2.09
RBM39-231	ENST00000477334	ZNF664	Q8N3J9	261 aa		1.98	□□□□□ -2.09
RBM39-231	ENST00000477334	CLDN22	Q8N7P3	220 aa		1.98	□□□□□ -2.09
RBM39-231	ENST00000477334	OR11G2	Q8NGC1	345 aa		1.98	□□□□□ -2.09
RBM39-231	ENST00000477334	OR2V1	Q8NHB1	315 aa		1.98	□□□□□ -2.09
RBM39-231	ENST00000477334	HIST1H2BA	Q96A08	127 aa		1.98	□□□□□ -2.09
RBM39-231	ENST00000477334	DGCR14	Q96DF8	476 aa	Known RBP	1.98	□□□□□ -2.09
RBM39-231	ENST00000477334	MS4A6E	Q96DS6	147 aa		1.98	□□□□□ -2.09
RBM39-231	ENST00000477334	ZNF492	Q9P255	531 aa		1.98	□□□□□ -2.09
RBM39-231	ENST00000477334	ZNF230	Q9UIE0	474 aa	Predicted RBP	1.98	□□□□□ -2.09
RBM39-231	ENST00000477334	WASHC3	Q9Y3C0	194 aa		1.98	□□□□□ -2.09
RBM39-231	ENST00000477334	PHLDA3	Q9Y5J5	127 aa		1.98	□□□□□ -2.09
RBM39-231	ENST00000477334	TGIF2-C20orf24	A0A0A6YYL0	155 aa		1.97	□□□□□ -2.09
RBM39-231	ENST00000477334	EVPLL	A8MZ36	301 aa		1.97	□□□□□ -2.09
RBM39-231	ENST00000477334	PSMD12	O00232	456 aa	Predicted RBP	1.97	□□□□□ -2.09
RBM39-231	ENST00000477334	KPNA3	O00505	521 aa	Predicted RBP	1.97	□□□□□ -2.09
RBM39-231	ENST00000477334	OR5F1	O95221	314 aa		1.97	□□□□□ -2.09
RBM39-231	ENST00000477334	SERPINA1	P01009	418 aa		1.97	□□□□□ -2.09
RBM39-231	ENST00000477334	IGKV1D-33	P01593	117 aa		1.97	□□□□□ -2.09
RBM39-231	ENST00000477334	IGKV1-33	P01594	117 aa		1.97	□□□□□ -2.09
RBM39-231	ENST00000477334	HLA-DQB2	P05538	268 aa		1.97	□□□□□ -2.09
RBM39-231	ENST00000477334	FAM228B	P0C875	321 aa		1.97	□□□□□ -2.09
RBM39-231	ENST00000477334	ZNF708	P17019	499 aa		1.97	□□□□□ -2.09
RBM39-231	ENST00000477334	CDK2	P24941	298 aa		1.97	□□□□□ -2.09
RBM39-231	ENST00000477334	CA7	P43166	264 aa		1.97	□□□□□ -2.09
RBM39-231	ENST00000477334	REG1B	P48304	166 aa		1.97	□□□□□ -2.09
RBM39-231	ENST00000477334	MARCKSL1	P49006	195 aa		1.97	□□□□□ -2.09
RBM39-231	ENST00000477334	TMEM33	P57088	247 aa		1.97	□□□□□ -2.09
RBM39-231	ENST00000477334	ARF6	P62330	175 aa		1.97	□□□□□ -2.09
RBM39-231	ENST00000477334	RAN	P62826	216 aa	Known RBP	1.97	□□□□□ -2.09
RBM39-231	ENST00000477334	PRDX4	Q13162	271 aa		1.97	□□□□□ -2.09
RBM39-231	ENST00000477334	IHH	Q14623	411 aa		1.97	□□□□□ -2.09
RBM39-231	ENST00000477334	JOSD1	Q15040	202 aa	Predicted RBP	1.97	□□□□□ -2.09
RBM39-231	ENST00000477334	PDGFRL	Q15198	375 aa		1.97	□□□□□ -2.09
RBM39-231	ENST00000477334	GUK1	Q16774	197 aa		1.97	□□□□□ -2.09
RBM39-231	ENST00000477334	LRP11	Q86VZ4	500 aa		1.97	□□□□□ -2.09
RBM39-231	ENST00000477334	ZNF567	Q8N184	647 aa		1.97	□□□□□ -2.09
RBM39-231	ENST00000477334	YIPF7	Q8N8F6	280 aa		1.97	□□□□□ -2.09
RBM39-231	ENST00000477334	ZFP62	Q8NB50	900 aa	Predicted RBP	1.97	□□□□□ -2.09
RBM39-231	ENST00000477334	C12orf43	Q96C57	262 aa	Known RBP	1.97	□□□□□ -2.09
RBM39-231	ENST00000477334	DCUN1D1	Q96GG9	259 aa		1.97	□□□□□ -2.09
RBM39-231	ENST00000477334	BTF3L4	Q96K17	158 aa		1.97	□□□□□ -2.09
RBM39-231	ENST00000477334	PHB2	Q99623	299 aa		1.97	□□□□□ -2.09
RBM39-231	ENST00000477334	TSSK6	Q9BXA6	273 aa		1.97	□□□□□ -2.09
RBM39-231	ENST00000477334	GNB1L	Q9BYB4	327 aa		1.97	□□□□□ -2.09
RBM39-231	ENST00000477334	ZNF586	Q9NXT0	402 aa		1.97	□□□□□ -2.09
RBM39-231	ENST00000477334	MIA3	Q5JRA6	1907 aa		1.97	□□□□□ -2.09
RBM39-231	ENST00000477334	UNC13A	Q9UPW8	1703 aa		1.97	□□□□□ -2.09
RBM39-231	ENST00000477334	FLT4	P35916	1363 aa		1.97	□□□□□ -2.09
RBM39-231	ENST00000477334	BAZ1B	Q9UIG0	1483 aa	Known RBP	1.96	□□□□□ -2.1
RBM39-231	ENST00000477334	IGHV3OR15-7	A0A075B7D8	119 aa		1.96	□□□□□ -2.1
RBM39-231	ENST00000477334		A0A0B4J2C4	111 aa		1.96	□□□□□ -2.1
RBM39-231	ENST00000477334	ZNF729	A6NN14	1252 aa	Predicted RBP	1.96	□□□□□ -2.1
RBM39-231	ENST00000477334	C4orf51	C9J302	202 aa		1.96	□□□□□ -2.1
RBM39-231	ENST00000477334	DENR	O43583	198 aa	Known RBP	1.96	□□□□□ -2.1
RBM39-231	ENST00000477334	CHP2	O43745	196 aa		1.96	□□□□□ -2.1
RBM39-231	ENST00000477334	FADS1	O60427	444 aa		1.96	□□□□□ -2.1
RBM39-231	ENST00000477334	CNIH1	O95406	144 aa		1.96	□□□□□ -2.1
RBM39-231	ENST00000477334	MT-CO2	P00403	227 aa		1.96	□□□□□ -2.1
RBM39-231	ENST00000477334	TRGV3	P03979	118 aa		1.96	□□□□□ -2.1
RBM39-231	ENST00000477334	OPN1SW	P03999	348 aa		1.96	□□□□□ -2.1
RBM39-231	ENST00000477334	CTLA4	P16410	223 aa		1.96	□□□□□ -2.1
RBM39-231	ENST00000477334	MAGEA12	P43365	314 aa		1.96	□□□□□ -2.1
RBM39-231	ENST00000477334	MAP2K4	P45985	399 aa		1.96	□□□□□ -2.1
RBM39-231	ENST00000477334	CTBP2	P56545	445 aa		1.96	□□□□□ -2.1

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