RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 SYNGR2O43760 224 aa4.25□□□□□ -1.73
CCDC39-204ENST00000476379 CD8AP01732 235 aa4.25□□□□□ -1.73
CCDC39-204ENST00000476379 GYPAP02724 150 aa4.25□□□□□ -1.73
CCDC39-204ENST00000476379 GPR12P47775 334 aa4.25□□□□□ -1.73
CCDC39-204ENST00000476379 DUSP3P51452 185 aaPredicted RBP4.25□□□□□ -1.73
CCDC39-204ENST00000476379 RAC3P60763 192 aa4.25□□□□□ -1.73
CCDC39-204ENST00000476379 ERVK-16P61578 105 aa4.25□□□□□ -1.73
CCDC39-204ENST00000476379 HIST1H3AP68431 136 aa4.25□□□□□ -1.73
CCDC39-204ENST00000476379 HLA-DRB3P79483 266 aa4.25□□□□□ -1.73
CCDC39-204ENST00000476379 PNLIPRP3Q17RR3 467 aa4.25□□□□□ -1.73
CCDC39-204ENST00000476379 C16orf82Q7Z2V1 217 aa4.25□□□□□ -1.73
CCDC39-204ENST00000476379 ZNRF1Q8ND25 227 aa4.25□□□□□ -1.73
CCDC39-204ENST00000476379 SLC25A40Q8TBP6 338 aa4.25□□□□□ -1.73
CCDC39-204ENST00000476379 Q96M66 194 aa4.25□□□□□ -1.73
CCDC39-204ENST00000476379 GGACTQ9BVM4 153 aa4.25□□□□□ -1.73
CCDC39-204ENST00000476379 ZDHHC11Q9H8X9 412 aa4.25□□□□□ -1.73
CCDC39-204ENST00000476379 KIR2DS1A0A191URI9 304 aa4.25□□□□□ -1.73
CCDC39-204ENST00000476379 MDFIC2A0A1B0GVS7 189 aa4.25□□□□□ -1.73
CCDC39-204ENST00000476379 SLC17A3O00476 420 aa4.25□□□□□ -1.73
CCDC39-204ENST00000476379 TAAR5O14804 337 aa4.25□□□□□ -1.73
CCDC39-204ENST00000476379 NDUFB4O95168 129 aa4.25□□□□□ -1.73
CCDC39-204ENST00000476379 VAMP5O95183 116 aa4.25□□□□□ -1.73
CCDC39-204ENST00000476379 KIR2DS4P43632 304 aa4.25□□□□□ -1.73
CCDC39-204ENST00000476379 GLIPR1P48060 266 aa4.25□□□□□ -1.73
CCDC39-204ENST00000476379 RPS23P62266 143 aaKnown RBP4.25□□□□□ -1.73
CCDC39-204ENST00000476379 CCL8P80075 99 aa4.25□□□□□ -1.73
CCDC39-204ENST00000476379 TFF3Q07654 80 aa4.25□□□□□ -1.73
CCDC39-204ENST00000476379 ZNF345Q14585 488 aa4.25□□□□□ -1.73
CCDC39-204ENST00000476379 KIR2DS1Q14954 304 aa4.25□□□□□ -1.73
CCDC39-204ENST00000476379 PLA2G2CQ5R387 149 aa4.25□□□□□ -1.73
CCDC39-204ENST00000476379 C20orf204Q6ZNR8 217 aa4.25□□□□□ -1.73
CCDC39-204ENST00000476379 MUC15Q8N387 334 aa4.25□□□□□ -1.73
CCDC39-204ENST00000476379 IGFBPL1Q8WX77 278 aa4.25□□□□□ -1.73
CCDC39-204ENST00000476379 SSBP3Q9BWW4 388 aaPredicted RBP4.25□□□□□ -1.73
CCDC39-204ENST00000476379 ALX4Q9H161 411 aaPredicted RBP4.25□□□□□ -1.73
CCDC39-204ENST00000476379 ITPR3Q14573 2671 aa4.25□□□□□ -1.73
CCDC39-204ENST00000476379 A0A1W2PQD3 144 aa4.25□□□□□ -1.73
CCDC39-204ENST00000476379 CRYM-AS1A6NIL9 109 aa4.25□□□□□ -1.73
CCDC39-204ENST00000476379 LRRC3CA6NJW4 275 aa4.25□□□□□ -1.73
CCDC39-204ENST00000476379 REG1AP05451 166 aa4.25□□□□□ -1.73
CCDC39-204ENST00000476379 OR8U8P0C7N1 319 aa4.25□□□□□ -1.73
CCDC39-204ENST00000476379 FSTP19883 344 aa4.25□□□□□ -1.73
CCDC39-204ENST00000476379 P2RY1P47900 373 aa4.25□□□□□ -1.73
CCDC39-204ENST00000476379 IGLV3-21P80748 117 aaPredicted RBP4.25□□□□□ -1.73
CCDC39-204ENST00000476379 TMEM187Q14656 261 aa4.25□□□□□ -1.73
CCDC39-204ENST00000476379 OR2Y1Q8NGV0 311 aa4.25□□□□□ -1.73
CCDC39-204ENST00000476379 SNAPC5O75971 98 aa4.25□□□□□ -1.73
CCDC39-204ENST00000476379 S1PR2O95136 353 aa4.25□□□□□ -1.73
CCDC39-204ENST00000476379 ZNF137PP52743 207 aa4.25□□□□□ -1.73
CCDC39-204ENST00000476379 ERVFC1-1P60608 527 aa4.25□□□□□ -1.73
CCDC39-204ENST00000476379 P2RY6Q15077 328 aa4.25□□□□□ -1.73
CCDC39-204ENST00000476379 EXT1Q16394 746 aa4.25□□□□□ -1.73
CCDC39-204ENST00000476379 PRSS8Q16651 343 aa4.25□□□□□ -1.73
CCDC39-204ENST00000476379 TBC1D28Q2M2D7 210 aa4.25□□□□□ -1.73
CCDC39-204ENST00000476379 OXLD1Q5BKU9 147 aa4.25□□□□□ -1.73
CCDC39-204ENST00000476379 MIC13Q5XKP0 118 aa4.25□□□□□ -1.73
CCDC39-204ENST00000476379 VN1R17PQ8TDU5 208 aa4.25□□□□□ -1.73
CCDC39-204ENST00000476379 LRRC29Q8WV35 223 aa4.25□□□□□ -1.73
CCDC39-204ENST00000476379 CCL17Q92583 94 aa4.25□□□□□ -1.73
CCDC39-204ENST00000476379 SPSB1Q96BD6 273 aa4.25□□□□□ -1.73
CCDC39-204ENST00000476379 PHYHIPLQ96FC7 376 aa4.25□□□□□ -1.73
CCDC39-204ENST00000476379 DERL1Q9BUN8 251 aa4.25□□□□□ -1.73
CCDC39-204ENST00000476379 TUBA4BQ9H853 241 aa4.25□□□□□ -1.73
CCDC39-204ENST00000476379 SRD5A3Q9H8P0 318 aa4.25□□□□□ -1.73
CCDC39-204ENST00000476379 Q9N2K0 584 aa4.25□□□□□ -1.73
CCDC39-204ENST00000476379 RNF24Q9Y225 148 aa4.25□□□□□ -1.73
CCDC39-204ENST00000476379 ATP23Q9Y6H3 246 aa4.25□□□□□ -1.73
CCDC39-204ENST00000476379 TNRC6AQ8NDV7 1962 aaKnown RBP4.25□□□□□ -1.73
CCDC39-204ENST00000476379 UMODP07911 640 aa4.24□□□□□ -1.73
CCDC39-204ENST00000476379 CD46P15529 392 aa4.24□□□□□ -1.73
CCDC39-204ENST00000476379 DTYMKP23919 212 aa4.24□□□□□ -1.73
CCDC39-204ENST00000476379 S100A7P31151 101 aa4.24□□□□□ -1.73
CCDC39-204ENST00000476379 KHDC3LQ587J8 217 aa4.24□□□□□ -1.73
CCDC39-204ENST00000476379 RPL39P5Q59GN2 51 aa4.24□□□□□ -1.73
CCDC39-204ENST00000476379 VAX1Q5SQQ9 334 aa4.24□□□□□ -1.73
CCDC39-204ENST00000476379 UQCC3Q6UW78 93 aa4.24□□□□□ -1.73
CCDC39-204ENST00000476379 DPPA3Q6W0C5 159 aa4.24□□□□□ -1.73
CCDC39-204ENST00000476379 TGIF2LXQ8IUE1 241 aa4.24□□□□□ -1.73
CCDC39-204ENST00000476379 FDCSPQ8NFU4 85 aa4.24□□□□□ -1.73
CCDC39-204ENST00000476379 LILRB1Q8NHL6 650 aaPredicted RBP4.24□□□□□ -1.73
CCDC39-204ENST00000476379 DEFB104AQ8WTQ1 72 aa4.24□□□□□ -1.73
CCDC39-204ENST00000476379 GALMQ96C23 342 aa4.24□□□□□ -1.73
CCDC39-204ENST00000476379 EAF1Q96JC9 268 aaPredicted RBP4.24□□□□□ -1.73
CCDC39-204ENST00000476379 TXN2Q99757 166 aa4.24□□□□□ -1.73
CCDC39-204ENST00000476379 IER2Q9BTL4 223 aa4.24□□□□□ -1.73
CCDC39-204ENST00000476379 MRPL13Q9BYD1 178 aaKnown RBP4.24□□□□□ -1.73
CCDC39-204ENST00000476379 TMEM100Q9NV29 134 aa4.24□□□□□ -1.73
CCDC39-204ENST00000476379 PLA2G2EQ9NZK7 142 aa4.24□□□□□ -1.73
CCDC39-204ENST00000476379 STRAPQ9Y3F4 350 aaKnown RBP4.24□□□□□ -1.73
CCDC39-204ENST00000476379 TMED3Q9Y3Q3 217 aa4.24□□□□□ -1.73
CCDC39-204ENST00000476379 PPIAL4AQ9Y536 164 aa4.24□□□□□ -1.73
CCDC39-204ENST00000476379 MAST4O15021 2626 aa4.24□□□□□ -1.73
CCDC39-204ENST00000476379 NBPF19A0A087WUL8 3843 aa4.24□□□□□ -1.73
CCDC39-204ENST00000476379 IGHV1-45A0A0A0MS14 117 aa4.24□□□□□ -1.73
CCDC39-204ENST00000476379 A6NNC1 897 aa4.24□□□□□ -1.73
CCDC39-204ENST00000476379 COLCA2A8K830 154 aa4.24□□□□□ -1.73
CCDC39-204ENST00000476379 TRDCB7Z8K6 153 aa4.24□□□□□ -1.73
CCDC39-204ENST00000476379 PGLYRP1O75594 196 aaPredicted RBP4.24□□□□□ -1.73
CCDC39-204ENST00000476379 OR2H2O95918 312 aa4.24□□□□□ -1.73
CCDC39-204ENST00000476379 CA1P00915 261 aaPredicted RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms