RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 ARSBP15848 533 aa5.41□□□□□ -1.54
HDAC3-207ENST00000475549 CHRNA7P36544 502 aa5.41□□□□□ -1.54
HDAC3-207ENST00000475549 CLDN12P56749 244 aa5.41□□□□□ -1.54
HDAC3-207ENST00000475549 RPS25P62851 125 aaKnown RBP5.41□□□□□ -1.54
HDAC3-207ENST00000475549 TPBGQ13641 420 aa5.41□□□□□ -1.54
HDAC3-207ENST00000475549 PSG5Q15238 335 aa5.41□□□□□ -1.54
HDAC3-207ENST00000475549 MED22Q15528 200 aa5.41□□□□□ -1.54
HDAC3-207ENST00000475549 ECSCRQ19T08 205 aa5.41□□□□□ -1.54
HDAC3-207ENST00000475549 C2orf76Q3KRA6 126 aa5.41□□□□□ -1.54
HDAC3-207ENST00000475549 HSD17B12Q53GQ0 312 aa5.41□□□□□ -1.54
HDAC3-207ENST00000475549 ZNF660Q6AZW8 331 aaPredicted RBP5.41□□□□□ -1.54
HDAC3-207ENST00000475549 FAM71F2Q6NXP2 309 aa5.41□□□□□ -1.54
HDAC3-207ENST00000475549 CD200R1LQ6Q8B3 271 aa5.41□□□□□ -1.54
HDAC3-207ENST00000475549 ZNF429Q86V71 674 aa5.41□□□□□ -1.54
HDAC3-207ENST00000475549 ZNF383Q8NA42 475 aa5.41□□□□□ -1.54
HDAC3-207ENST00000475549 LFNGQ8NES3 379 aa5.41□□□□□ -1.54
HDAC3-207ENST00000475549 SETD6Q8TBK2 473 aa5.41□□□□□ -1.54
HDAC3-207ENST00000475549 THRSPQ92748 146 aa5.41□□□□□ -1.54
HDAC3-207ENST00000475549 PTX4Q96A99 478 aa5.41□□□□□ -1.54
HDAC3-207ENST00000475549 C5orf30Q96GV9 206 aa5.41□□□□□ -1.54
HDAC3-207ENST00000475549 MS4A10Q96PG2 267 aa5.41□□□□□ -1.54
HDAC3-207ENST00000475549 CLCC1Q96S66 551 aa5.41□□□□□ -1.54
HDAC3-207ENST00000475549 MND1Q9BWT6 205 aa5.41□□□□□ -1.54
HDAC3-207ENST00000475549 Q9N2K0 584 aa5.41□□□□□ -1.54
HDAC3-207ENST00000475549 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.41□□□□□ -1.54
HDAC3-207ENST00000475549 PIPOXQ9P0Z9 390 aa5.41□□□□□ -1.54
HDAC3-207ENST00000475549 ABRACLQ9P1F3 81 aa5.41□□□□□ -1.54
HDAC3-207ENST00000475549 ZMAT5Q9UDW3 170 aaKnown RBP5.41□□□□□ -1.54
HDAC3-207ENST00000475549 STEAP1Q9UHE8 339 aa5.41□□□□□ -1.54
HDAC3-207ENST00000475549 HSF4Q9ULV5 492 aa5.41□□□□□ -1.54
HDAC3-207ENST00000475549 AK6Q9Y3D8 172 aaKnown RBP5.41□□□□□ -1.54
HDAC3-207ENST00000475549 A3GALT2U3KPV4 340 aa5.41□□□□□ -1.54
HDAC3-207ENST00000475549 HUWE1Q7Z6Z7 4374 aaKnown RBP5.4□□□□□ -1.54
HDAC3-207ENST00000475549 SHISA3A0PJX4 238 aa5.4□□□□□ -1.54
HDAC3-207ENST00000475549 OR5H14A6NHG9 310 aa5.4□□□□□ -1.54
HDAC3-207ENST00000475549 SLC17A2O00624 439 aa5.4□□□□□ -1.54
HDAC3-207ENST00000475549 OVOL1O14753 267 aa5.4□□□□□ -1.54
HDAC3-207ENST00000475549 IGLV2-23P01705 113 aa5.4□□□□□ -1.54
HDAC3-207ENST00000475549 IGHV3-11P01762 117 aa5.4□□□□□ -1.54
HDAC3-207ENST00000475549 CRYGBP07316 175 aa5.4□□□□□ -1.54
HDAC3-207ENST00000475549 LGALS1P09382 135 aaKnown RBP5.4□□□□□ -1.54
HDAC3-207ENST00000475549 SPNP16150 400 aa5.4□□□□□ -1.54
HDAC3-207ENST00000475549 ZBTB25P24278 435 aa5.4□□□□□ -1.54
HDAC3-207ENST00000475549 MC5RP33032 325 aa5.4□□□□□ -1.54
HDAC3-207ENST00000475549 MAP2K4P45985 399 aa5.4□□□□□ -1.54
HDAC3-207ENST00000475549 VEGFCP49767 419 aa5.4□□□□□ -1.54
HDAC3-207ENST00000475549 INSL3P51460 131 aa5.4□□□□□ -1.54
HDAC3-207ENST00000475549 AQP4P55087 323 aa5.4□□□□□ -1.54
HDAC3-207ENST00000475549 FABP5Q01469 135 aa5.4□□□□□ -1.54
HDAC3-207ENST00000475549 PJVKQ0ZLH3 352 aa5.4□□□□□ -1.54
HDAC3-207ENST00000475549 DCTN2Q13561 401 aaKnown RBP5.4□□□□□ -1.54
HDAC3-207ENST00000475549 MRGPRG-AS1Q2M3A8 158 aa5.4□□□□□ -1.54
HDAC3-207ENST00000475549 MOGAT2Q3SYC2 334 aa5.4□□□□□ -1.54
HDAC3-207ENST00000475549 AKIRIN2Q53H80 203 aa5.4□□□□□ -1.54
HDAC3-207ENST00000475549 ACSM6Q6P461 480 aa5.4□□□□□ -1.54
HDAC3-207ENST00000475549 ZNF562Q6V9R5 426 aa5.4□□□□□ -1.54
HDAC3-207ENST00000475549 OR6M1Q8NGM8 313 aa5.4□□□□□ -1.54
HDAC3-207ENST00000475549 ARPC1AQ92747 370 aa5.4□□□□□ -1.54
HDAC3-207ENST00000475549 FAM3DQ96BQ1 224 aa5.4□□□□□ -1.54
HDAC3-207ENST00000475549 ARHGAP5-AS1Q96IT6 56 aa5.4□□□□□ -1.54
HDAC3-207ENST00000475549 RHOVQ96L33 236 aa5.4□□□□□ -1.54
HDAC3-207ENST00000475549 RNF5Q99942 180 aa5.4□□□□□ -1.54
HDAC3-207ENST00000475549 PECRQ9BY49 303 aa5.4□□□□□ -1.54
HDAC3-207ENST00000475549 RIMS4Q9H426 269 aaPredicted RBP5.4□□□□□ -1.54
HDAC3-207ENST00000475549 CHMP1AQ9HD42 196 aaPredicted RBP5.4□□□□□ -1.54
HDAC3-207ENST00000475549 METTL1Q9UBP6 276 aaKnown RBP5.4□□□□□ -1.54
HDAC3-207ENST00000475549 FOXA2Q9Y261 457 aaPredicted RBP5.4□□□□□ -1.54
HDAC3-207ENST00000475549 TENM2Q9NT68 2774 aa5.39□□□□□ -1.55
HDAC3-207ENST00000475549 TMEM272A0A1B0GTI8 110 aa5.39□□□□□ -1.55
HDAC3-207ENST00000475549 TRIM64CA6NLI5 447 aa5.39□□□□□ -1.55
HDAC3-207ENST00000475549 SRRM4A7MD48 611 aaKnown RBP5.39□□□□□ -1.55
HDAC3-207ENST00000475549 TRDCB7Z8K6 153 aa5.39□□□□□ -1.55
HDAC3-207ENST00000475549 LINC01619G3V211 115 aa5.39□□□□□ -1.55
HDAC3-207ENST00000475549 H7C2Y5 167 aa5.39□□□□□ -1.55
HDAC3-207ENST00000475549 SAP30O75446 220 aa5.39□□□□□ -1.55
HDAC3-207ENST00000475549 RBMXL2O75526 392 aaKnown RBP5.39□□□□□ -1.55
HDAC3-207ENST00000475549 RBBP9O75884 186 aa5.39□□□□□ -1.55
HDAC3-207ENST00000475549 CA2P00918 260 aa5.39□□□□□ -1.55
HDAC3-207ENST00000475549 GSTP1P09211 210 aaKnown RBP5.39□□□□□ -1.55
HDAC3-207ENST00000475549 FRMD6-AS1P0C7T7 363 aa5.39□□□□□ -1.55
HDAC3-207ENST00000475549 HSMCR30P0CW71 290 aa5.39□□□□□ -1.55
HDAC3-207ENST00000475549 CPEP16870 476 aa5.39□□□□□ -1.55
HDAC3-207ENST00000475549 CRHBPP24387 322 aa5.39□□□□□ -1.55
HDAC3-207ENST00000475549 OR10A3P58181 314 aa5.39□□□□□ -1.55
HDAC3-207ENST00000475549 HLA-DRB3P79483 266 aa5.39□□□□□ -1.55
HDAC3-207ENST00000475549 SSX1Q16384 188 aa5.39□□□□□ -1.55
HDAC3-207ENST00000475549 ACTBL2Q562R1 376 aa5.39□□□□□ -1.55
HDAC3-207ENST00000475549 UNQ5815/PRO19632Q6UWF5 114 aa5.39□□□□□ -1.55
HDAC3-207ENST00000475549 IL34Q6ZMJ4 242 aa5.39□□□□□ -1.55
HDAC3-207ENST00000475549 MOB1BQ7L9L4 216 aa5.39□□□□□ -1.55
HDAC3-207ENST00000475549 OVCH2Q7RTZ1 564 aa5.39□□□□□ -1.55
HDAC3-207ENST00000475549 HAPLN4Q86UW8 402 aa5.39□□□□□ -1.55
HDAC3-207ENST00000475549 PPP1R27Q86WC6 154 aa5.39□□□□□ -1.55
HDAC3-207ENST00000475549 Q8N1Y9 231 aa5.39□□□□□ -1.55
HDAC3-207ENST00000475549 UFD1Q92890 307 aa5.39□□□□□ -1.55
HDAC3-207ENST00000475549 GHITMQ9H3K2 345 aa5.39□□□□□ -1.55
HDAC3-207ENST00000475549 ISYNA1Q9NPH2 558 aa5.39□□□□□ -1.55
HDAC3-207ENST00000475549 PGPEP1Q9NXJ5 209 aa5.39□□□□□ -1.55
HDAC3-207ENST00000475549 RDH8Q9NYR8 311 aa5.39□□□□□ -1.55
HDAC3-207ENST00000475549 KIAA1456Q9P272 454 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms