RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 E7EQL1 145 aa12.75□□□□□ -0.37
RPUSD3-215ENST00000475470 SYNGR2O43760 224 aa12.75□□□□□ -0.37
RPUSD3-215ENST00000475470 G6PCP35575 357 aa12.75□□□□□ -0.37
RPUSD3-215ENST00000475470 LOXL3P58215 753 aa12.75□□□□□ -0.37
RPUSD3-215ENST00000475470 MST1LQ2TV78 715 aa12.75□□□□□ -0.37
RPUSD3-215ENST00000475470 UQCC3Q6UW78 93 aa12.75□□□□□ -0.37
RPUSD3-215ENST00000475470 FAM216BQ8N7L0 139 aa12.75□□□□□ -0.37
RPUSD3-215ENST00000475470 OR5C1Q8NGR4 320 aa12.75□□□□□ -0.37
RPUSD3-215ENST00000475470 NARS2Q96I59 477 aaKnown RBP12.75□□□□□ -0.37
RPUSD3-215ENST00000475470 MMP26Q9NRE1 261 aa12.75□□□□□ -0.37
RPUSD3-215ENST00000475470 PLA2G2EQ9NZK7 142 aa12.75□□□□□ -0.37
RPUSD3-215ENST00000475470 NDRG3Q9UGV2 375 aa12.75□□□□□ -0.37
RPUSD3-215ENST00000475470 SPTBN4Q9H254 2564 aa12.75□□□□□ -0.37
RPUSD3-215ENST00000475470 RAI1Q7Z5J4 1906 aaPredicted RBP12.75□□□□□ -0.37
RPUSD3-215ENST00000475470 S1PR2O95136 353 aa12.74□□□□□ -0.37
RPUSD3-215ENST00000475470 CD3EP07766 207 aa12.74□□□□□ -0.37
RPUSD3-215ENST00000475470 CGB3P0DN86 165 aa12.74□□□□□ -0.37
RPUSD3-215ENST00000475470 CGB7P0DN87 165 aa12.74□□□□□ -0.37
RPUSD3-215ENST00000475470 SPP1P10451 314 aa12.74□□□□□ -0.37
RPUSD3-215ENST00000475470 DMRTC2Q8IXT2 367 aaPredicted RBP12.74□□□□□ -0.37
RPUSD3-215ENST00000475470 TMEM217Q8N7C4 229 aa12.74□□□□□ -0.37
RPUSD3-215ENST00000475470 BPIFCQ8NFQ6 507 aa12.74□□□□□ -0.37
RPUSD3-215ENST00000475470 FAM216AQ8WUB2 273 aa12.74□□□□□ -0.37
RPUSD3-215ENST00000475470 DYNLRB1Q9NP97 96 aa12.74□□□□□ -0.37
RPUSD3-215ENST00000475470 NKX6-3A6NJ46 265 aa12.74□□□□□ -0.37
RPUSD3-215ENST00000475470 LINC00473A8K010 186 aa12.74□□□□□ -0.37
RPUSD3-215ENST00000475470 H3BP45 60 aa12.74□□□□□ -0.37
RPUSD3-215ENST00000475470 CLDN14O95500 239 aa12.74□□□□□ -0.37
RPUSD3-215ENST00000475470 IGHV3-7P01780 117 aa12.74□□□□□ -0.37
RPUSD3-215ENST00000475470 APOC3P02656 99 aa12.74□□□□□ -0.37
RPUSD3-215ENST00000475470 DYNLT3P51808 116 aa12.74□□□□□ -0.37
RPUSD3-215ENST00000475470 C17orf58Q2M2W7 97 aa12.74□□□□□ -0.37
RPUSD3-215ENST00000475470 ATRAIDQ6UW56 229 aa12.74□□□□□ -0.37
RPUSD3-215ENST00000475470 STX12Q86Y82 276 aa12.74□□□□□ -0.37
RPUSD3-215ENST00000475470 ODF3L1Q8IXM7 274 aa12.74□□□□□ -0.37
RPUSD3-215ENST00000475470 C1orf87Q8N0U7 546 aa12.74□□□□□ -0.37
RPUSD3-215ENST00000475470 NEUROG1Q92886 237 aa12.74□□□□□ -0.37
RPUSD3-215ENST00000475470 RNASE6Q93091 150 aaKnown RBP12.74□□□□□ -0.37
RPUSD3-215ENST00000475470 WSB1Q9Y6I7 421 aa12.74□□□□□ -0.37
RPUSD3-215ENST00000475470 TRAV38-1A0A0B4J264 116 aa12.73□□□□□ -0.37
RPUSD3-215ENST00000475470 KBTBD11-OT1A0A1B0GTJ5 212 aa12.73□□□□□ -0.37
RPUSD3-215ENST00000475470 TOR1AO14656 332 aa12.73□□□□□ -0.37
RPUSD3-215ENST00000475470 TMPRSS2O15393 492 aa12.73□□□□□ -0.37
RPUSD3-215ENST00000475470 IAPPP10997 89 aa12.73□□□□□ -0.37
RPUSD3-215ENST00000475470 BRWD1-AS2P59051 145 aa12.73□□□□□ -0.37
RPUSD3-215ENST00000475470 IL34Q6ZMJ4 242 aa12.73□□□□□ -0.37
RPUSD3-215ENST00000475470 LINC01560Q8TB33 94 aa12.73□□□□□ -0.37
RPUSD3-215ENST00000475470 SH3BGRL3Q9H299 93 aa12.73□□□□□ -0.37
RPUSD3-215ENST00000475470 PARP11Q9NR21 331 aa12.73□□□□□ -0.37
RPUSD3-215ENST00000475470 COA4Q9NYJ1 87 aa12.73□□□□□ -0.37
RPUSD3-215ENST00000475470 CLN8Q9UBY8 286 aa12.73□□□□□ -0.37
RPUSD3-215ENST00000475470 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.73□□□□□ -0.37
RPUSD3-215ENST00000475470 ARHGDIBP52566 201 aa12.73□□□□□ -0.37
RPUSD3-215ENST00000475470 LINC00205P59089 165 aa12.73□□□□□ -0.37
RPUSD3-215ENST00000475470 FBXL19-AS1Q494R0 122 aa12.73□□□□□ -0.37
RPUSD3-215ENST00000475470 Q6ZRG5 221 aa12.73□□□□□ -0.37
RPUSD3-215ENST00000475470 KDF1Q8NAX2 398 aaPredicted RBP12.73□□□□□ -0.37
RPUSD3-215ENST00000475470 PSENENQ9NZ42 101 aa12.73□□□□□ -0.37
RPUSD3-215ENST00000475470 LAMP3Q9UQV4 416 aa12.73□□□□□ -0.37
RPUSD3-215ENST00000475470 TXNL1O43396 289 aa12.72□□□□□ -0.37
RPUSD3-215ENST00000475470 APOBEC3AP31941 199 aaPredicted RBP12.72□□□□□ -0.37
RPUSD3-215ENST00000475470 ZNF134P52741 427 aa12.72□□□□□ -0.37
RPUSD3-215ENST00000475470 PJVKQ0ZLH3 352 aa12.72□□□□□ -0.37
RPUSD3-215ENST00000475470 ZNF295-AS1Q8N0V1 137 aa12.72□□□□□ -0.37
RPUSD3-215ENST00000475470 CD300LFQ8TDQ1 290 aa12.72□□□□□ -0.37
RPUSD3-215ENST00000475470 CCL17Q92583 94 aa12.72□□□□□ -0.37
RPUSD3-215ENST00000475470 MS4A5Q9H3V2 200 aa12.72□□□□□ -0.37
RPUSD3-215ENST00000475470 KCNJ16Q9NPI9 418 aa12.72□□□□□ -0.37
RPUSD3-215ENST00000475470 FAM90A26D6RGX4 464 aa12.72□□□□□ -0.37
RPUSD3-215ENST00000475470 TRIM77I1YAP6 450 aa12.72□□□□□ -0.37
RPUSD3-215ENST00000475470 M0R1X1 148 aa12.72□□□□□ -0.37
RPUSD3-215ENST00000475470 NDUFB7P17568 137 aa12.72□□□□□ -0.37
RPUSD3-215ENST00000475470 DUTP33316 252 aaKnown RBP12.72□□□□□ -0.37
RPUSD3-215ENST00000475470 SULT1A1P50225 295 aa12.72□□□□□ -0.37
RPUSD3-215ENST00000475470 AKR1C1Q04828 323 aa12.72□□□□□ -0.37
RPUSD3-215ENST00000475470 NCR3LG1Q68D85 454 aa12.72□□□□□ -0.37
RPUSD3-215ENST00000475470 H2BFWTQ7Z2G1 175 aa12.72□□□□□ -0.37
RPUSD3-215ENST00000475470 LEAP2Q969E1 77 aa12.72□□□□□ -0.37
RPUSD3-215ENST00000475470 GFOD1Q9NXC2 390 aa12.72□□□□□ -0.37
RPUSD3-215ENST00000475470 POLEQ07864 2286 aa12.71□□□□□ -0.37
RPUSD3-215ENST00000475470 PPIAL4EA0A075B759 164 aa12.71□□□□□ -0.37
RPUSD3-215ENST00000475470 PPIAL4DF5H284 164 aa12.71□□□□□ -0.37
RPUSD3-215ENST00000475470 TMEM178BH3BS89 294 aa12.71□□□□□ -0.37
RPUSD3-215ENST00000475470 DLL1O00548 723 aa12.71□□□□□ -0.37
RPUSD3-215ENST00000475470 PROP1O75360 226 aa12.71□□□□□ -0.37
RPUSD3-215ENST00000475470 DANCRP0C864 163 aa12.71□□□□□ -0.37
RPUSD3-215ENST00000475470 PPIAL4FP0DN26 164 aa12.71□□□□□ -0.37
RPUSD3-215ENST00000475470 RAB7AP51149 207 aa12.71□□□□□ -0.37
RPUSD3-215ENST00000475470 F2RL1P55085 397 aa12.71□□□□□ -0.37
RPUSD3-215ENST00000475470 TMEM267Q0VDI3 215 aaPredicted RBP12.71□□□□□ -0.37
RPUSD3-215ENST00000475470 IFI27L2Q9H2X8 130 aa12.71□□□□□ -0.37
RPUSD3-215ENST00000475470 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.71□□□□□ -0.37
RPUSD3-215ENST00000475470 TMEM106BQ9NUM4 274 aa12.71□□□□□ -0.37
RPUSD3-215ENST00000475470 PPIAL4AQ9Y536 164 aa12.71□□□□□ -0.37
RPUSD3-215ENST00000475470 USF3Q68DE3 2245 aa12.71□□□□□ -0.37
RPUSD3-215ENST00000475470 DIDO1Q9BTC0 2240 aaKnown RBP12.71□□□□□ -0.38
RPUSD3-215ENST00000475470 ZNF729A6NN14 1252 aaPredicted RBP12.71□□□□□ -0.38
RPUSD3-215ENST00000475470 PRH1P02810 166 aa12.71□□□□□ -0.38
RPUSD3-215ENST00000475470 P0C879 139 aa12.71□□□□□ -0.38
RPUSD3-215ENST00000475470 NFYBP25208 207 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms