RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 YIF1BQ5BJH7 314 aa9.58□□□□□ -0.88
SKA3-206ENST00000475251 GLDNQ6ZMI3 551 aaPredicted RBP9.58□□□□□ -0.88
SKA3-206ENST00000475251 IL34Q6ZMJ4 242 aa9.58□□□□□ -0.88
SKA3-206ENST00000475251 LINC00322Q6ZN03 302 aaPredicted RBP9.58□□□□□ -0.88
SKA3-206ENST00000475251 OR5AN1Q8NGI8 311 aa9.58□□□□□ -0.88
SKA3-206ENST00000475251 RHOXF1Q8NHV9 184 aa9.58□□□□□ -0.88
SKA3-206ENST00000475251 GRPEL2Q8TAA5 225 aa9.58□□□□□ -0.88
SKA3-206ENST00000475251 LINC00476Q8WZB0 136 aa9.58□□□□□ -0.88
SKA3-206ENST00000475251 Q96M66 194 aa9.58□□□□□ -0.88
SKA3-206ENST00000475251 FAM110AQ9BQ89 295 aa9.58□□□□□ -0.88
SKA3-206ENST00000475251 BANF2Q9H503 90 aa9.58□□□□□ -0.88
SKA3-206ENST00000475251 PLEKHA3Q9HB20 300 aa9.58□□□□□ -0.88
SKA3-206ENST00000475251 RETNQ9HD89 108 aa9.58□□□□□ -0.88
SKA3-206ENST00000475251 GHRLQ9UBU3 117 aa9.58□□□□□ -0.88
SKA3-206ENST00000475251 AASSQ9UDR5 926 aa9.58□□□□□ -0.88
SKA3-206ENST00000475251 ALMS1Q8TCU4 4167 aa9.57□□□□□ -0.88
SKA3-206ENST00000475251 A0A0B4J203 849 aa9.57□□□□□ -0.88
SKA3-206ENST00000475251 TRBV5-5A0A0J9YX44 114 aa9.57□□□□□ -0.88
SKA3-206ENST00000475251 OGG1O15527 345 aa9.57□□□□□ -0.88
SKA3-206ENST00000475251 BRI3O95415 125 aa9.57□□□□□ -0.88
SKA3-206ENST00000475251 CSN3P07498 182 aa9.57□□□□□ -0.88
SKA3-206ENST00000475251 DCKP27707 260 aa9.57□□□□□ -0.88
SKA3-206ENST00000475251 LGALS7P47929 136 aa9.57□□□□□ -0.88
SKA3-206ENST00000475251 RPL39P5Q59GN2 51 aa9.57□□□□□ -0.88
SKA3-206ENST00000475251 XAF1Q6GPH4 301 aa9.57□□□□□ -0.88
SKA3-206ENST00000475251 NKAIN3Q8N8D7 197 aa9.57□□□□□ -0.88
SKA3-206ENST00000475251 EDARADDQ8WWZ3 215 aa9.57□□□□□ -0.88
SKA3-206ENST00000475251 ORAI1Q96D31 301 aa9.57□□□□□ -0.88
SKA3-206ENST00000475251 USMG5Q96IX5 58 aa9.57□□□□□ -0.88
SKA3-206ENST00000475251 NEDD4LQ96PU5 975 aa9.57□□□□□ -0.88
SKA3-206ENST00000475251 OR14A2Q96R54 314 aa9.57□□□□□ -0.88
SKA3-206ENST00000475251 NEURL2Q9BR09 285 aa9.57□□□□□ -0.88
SKA3-206ENST00000475251 TNCP24821 2201 aa9.56□□□□□ -0.88
SKA3-206ENST00000475251 IRGMA1A4Y4 181 aa9.56□□□□□ -0.88
SKA3-206ENST00000475251 BAG2O95816 211 aa9.56□□□□□ -0.88
SKA3-206ENST00000475251 LY6G6CO95867 125 aa9.56□□□□□ -0.88
SKA3-206ENST00000475251 APOA2P02652 100 aa9.56□□□□□ -0.88
SKA3-206ENST00000475251 RPS16P62249 146 aaKnown RBP9.56□□□□□ -0.88
SKA3-206ENST00000475251 SIGIRRQ6IA17 410 aa9.56□□□□□ -0.88
SKA3-206ENST00000475251 ZNF343Q6P1L6 599 aa9.56□□□□□ -0.88
SKA3-206ENST00000475251 MOB1BQ7L9L4 216 aa9.56□□□□□ -0.88
SKA3-206ENST00000475251 PDPNQ86YL7 162 aa9.56□□□□□ -0.88
SKA3-206ENST00000475251 OR5T1Q8NG75 326 aa9.56□□□□□ -0.88
SKA3-206ENST00000475251 DDB2Q92466 427 aa9.56□□□□□ -0.88
SKA3-206ENST00000475251 SNAPC3Q92966 411 aa9.56□□□□□ -0.88
SKA3-206ENST00000475251 UQCC2Q9BRT2 126 aa9.56□□□□□ -0.88
SKA3-206ENST00000475251 FGF20Q9NP95 211 aaPredicted RBP9.56□□□□□ -0.88
SKA3-206ENST00000475251 BABAM2Q9NXR7 383 aa9.56□□□□□ -0.88
SKA3-206ENST00000475251 TRAV8-7A0A075B6U6 113 aa9.55□□□□□ -0.88
SKA3-206ENST00000475251 RBMY1BA6NDE4 496 aaKnown RBP9.55□□□□□ -0.88
SKA3-206ENST00000475251 RBMY1EA6NEQ0 496 aaKnown RBP9.55□□□□□ -0.88
SKA3-206ENST00000475251 CIB2O75838 187 aa9.55□□□□□ -0.88
SKA3-206ENST00000475251 RBMY1DP0C7P1 496 aaKnown RBP9.55□□□□□ -0.88
SKA3-206ENST00000475251 MYL12AP19105 171 aa9.55□□□□□ -0.88
SKA3-206ENST00000475251 MED21Q13503 144 aa9.55□□□□□ -0.88
SKA3-206ENST00000475251 OR2G6Q5TZ20 316 aa9.55□□□□□ -0.88
SKA3-206ENST00000475251 BVESQ8NE79 360 aa9.55□□□□□ -0.88
SKA3-206ENST00000475251 OR13C5Q8NGS8 318 aa9.55□□□□□ -0.88
SKA3-206ENST00000475251 THRSPQ92748 146 aa9.55□□□□□ -0.88
SKA3-206ENST00000475251 FAM46BQ96A09 425 aa9.55□□□□□ -0.88
SKA3-206ENST00000475251 ABHD14BQ96IU4 210 aa9.55□□□□□ -0.88
SKA3-206ENST00000475251 SULT4A1Q9BR01 284 aa9.55□□□□□ -0.88
SKA3-206ENST00000475251 TINAGL1Q9GZM7 467 aaPredicted RBP9.55□□□□□ -0.88
SKA3-206ENST00000475251 CHMP1AQ9HD42 196 aaPredicted RBP9.55□□□□□ -0.88
SKA3-206ENST00000475251 NUPR2A6NF83 97 aa9.54□□□□□ -0.88
SKA3-206ENST00000475251 UBBP0CG47 229 aa9.54□□□□□ -0.88
SKA3-206ENST00000475251 ZBTB25P24278 435 aa9.54□□□□□ -0.88
SKA3-206ENST00000475251 ETV1P50549 477 aa9.54□□□□□ -0.88
SKA3-206ENST00000475251 PLECQ15149 4684 aaKnown RBP9.54□□□□□ -0.88
SKA3-206ENST00000475251 C5orf24Q7Z6I8 188 aa9.54□□□□□ -0.88
SKA3-206ENST00000475251 SVOPQ8N4V2 548 aa9.54□□□□□ -0.88
SKA3-206ENST00000475251 DYNLRB2Q8TF09 96 aa9.54□□□□□ -0.88
SKA3-206ENST00000475251 SLC29A1Q99808 456 aa9.54□□□□□ -0.88
SKA3-206ENST00000475251 AGMATQ9BSE5 352 aa9.54□□□□□ -0.88
SKA3-206ENST00000475251 RIMS4Q9H426 269 aaPredicted RBP9.54□□□□□ -0.88
SKA3-206ENST00000475251 SRD5A3Q9H8P0 318 aa9.54□□□□□ -0.88
SKA3-206ENST00000475251 COA4Q9NYJ1 87 aa9.54□□□□□ -0.88
SKA3-206ENST00000475251 ZNF221Q9UK13 617 aa9.54□□□□□ -0.88
SKA3-206ENST00000475251 MGAT4AQ9UM21 535 aa9.54□□□□□ -0.88
SKA3-206ENST00000475251 TRBV5-7A0A0A0MS05 114 aa9.53□□□□□ -0.88
SKA3-206ENST00000475251 LOC100130705A0A1B0GUX0 176 aa9.53□□□□□ -0.88
SKA3-206ENST00000475251 IZUMO1RA6ND01 250 aa9.53□□□□□ -0.88
SKA3-206ENST00000475251 OR11H12B2RN74 326 aa9.53□□□□□ -0.88
SKA3-206ENST00000475251 H3BNX3 289 aa9.53□□□□□ -0.88
SKA3-206ENST00000475251 ATP5HO75947 161 aa9.53□□□□□ -0.88
SKA3-206ENST00000475251 IGKV1-16P04430 117 aa9.53□□□□□ -0.88
SKA3-206ENST00000475251 LORP23490 312 aaPredicted RBP9.53□□□□□ -0.88
SKA3-206ENST00000475251 MAPK3P27361 379 aaPredicted RBP9.53□□□□□ -0.88
SKA3-206ENST00000475251 MECP2P51608 486 aaKnown RBP9.53□□□□□ -0.88
SKA3-206ENST00000475251 FAM209BQ5JX69 171 aa9.53□□□□□ -0.88
SKA3-206ENST00000475251 CBR4Q8N4T8 237 aa9.53□□□□□ -0.88
SKA3-206ENST00000475251 DEFB125Q8N687 156 aa9.53□□□□□ -0.88
SKA3-206ENST00000475251 SETD6Q8TBK2 473 aa9.53□□□□□ -0.88
SKA3-206ENST00000475251 PHB2Q99623 299 aa9.53□□□□□ -0.88
SKA3-206ENST00000475251 ST6GALNAC5Q9BVH7 336 aa9.53□□□□□ -0.88
SKA3-206ENST00000475251 EXOSC1Q9Y3B2 195 aaKnown RBP9.53□□□□□ -0.88
SKA3-206ENST00000475251 A0A1W2PPK0 400 aa9.52□□□□□ -0.89
SKA3-206ENST00000475251 CXorf65A6NEN9 183 aa9.52□□□□□ -0.89
SKA3-206ENST00000475251 NAPSAO96009 420 aa9.52□□□□□ -0.89
SKA3-206ENST00000475251 CEACAM6P40199 344 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms