RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 PRR20DP86480 221 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 PRR20BP86481 221 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 PRR20AP86496 221 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 ZNF154Q13106 437 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 MFAP5Q13361 173 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 OR5I1Q13606 314 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 NRN1LQ496H8 165 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 PHYHD1Q5SRE7 291 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 LINC01545Q5VT33 79 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 ZNF66Q6ZN08 573 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 LINC00596Q86U02 117 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 ZNF761Q86XN6 746 aaPredicted RBP3.41□□□□□ -1.86
USP16-205ENST00000474835 FAM90A1Q86YD7 464 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 OR1K1Q8NGR3 316 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 SKA2Q8WVK7 121 aaPredicted RBP3.41□□□□□ -1.86
USP16-205ENST00000474835 OR1E3Q8WZA6 343 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 PROK2Q9HC23 129 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 ZNF160Q9HCG1 818 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 OBP2AQ9NY56 170 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 CLN8Q9UBY8 286 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 TRAV9-2A0A087WT02 112 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 TRAV8-6A0A0B4J262 113 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 A0A0G2JN53 185 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.41□□□□□ -1.86
USP16-205ENST00000474835 C17orf112F2Z3M2 114 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 INS-IGF2F8WCM5 200 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 CA3P07451 260 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 CMPK1P30085 196 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 GATA4P43694 442 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 PSMB3P49720 205 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 RBM11P57052 281 aaKnown RBP3.41□□□□□ -1.86
USP16-205ENST00000474835 RPL23AP62750 156 aaKnown RBP3.41□□□□□ -1.86
USP16-205ENST00000474835 PAX2Q02962 417 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 MYBPHQ13203 477 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 RAB30Q15771 203 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 TMEM196Q5HYL7 178 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 TREML4Q6UXN2 200 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 C20orf204Q6ZNR8 217 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 COX15Q7KZN9 410 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.41□□□□□ -1.86
USP16-205ENST00000474835 ZNF645Q8N7E2 425 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 WDR31Q8NA23 367 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 MLST8Q9BVC4 326 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 DOCK11Q5JSL3 2073 aa3.41□□□□□ -1.86
USP16-205ENST00000474835 DMXL1Q9Y485 3027 aa3.4□□□□□ -1.86
USP16-205ENST00000474835 H0YIG0 161 aa3.4□□□□□ -1.86
USP16-205ENST00000474835 XRCC2O43543 280 aa3.4□□□□□ -1.86
USP16-205ENST00000474835 B3GALT2O43825 422 aa3.4□□□□□ -1.86
USP16-205ENST00000474835 BRI3O95415 125 aa3.4□□□□□ -1.86
USP16-205ENST00000474835 KIR2DL1P43626 348 aaPredicted RBP3.4□□□□□ -1.86
USP16-205ENST00000474835 SMIM21Q3B7S5 101 aa3.4□□□□□ -1.86
USP16-205ENST00000474835 Q6ZVH6 145 aa3.4□□□□□ -1.86
USP16-205ENST00000474835 C6orf201Q7Z4U5 140 aa3.4□□□□□ -1.86
USP16-205ENST00000474835 TBC1D26Q86UD7 250 aa3.4□□□□□ -1.86
USP16-205ENST00000474835 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.4□□□□□ -1.86
USP16-205ENST00000474835 KIR3DL3Q8N743 410 aa3.4□□□□□ -1.86
USP16-205ENST00000474835 OR5D18Q8NGL1 313 aa3.4□□□□□ -1.86
USP16-205ENST00000474835 CD300LFQ8TDQ1 290 aa3.4□□□□□ -1.86
USP16-205ENST00000474835 SMIM12Q96EX1 92 aa3.4□□□□□ -1.86
USP16-205ENST00000474835 TCEAL2Q9H3H9 227 aaPredicted RBP3.4□□□□□ -1.86
USP16-205ENST00000474835 NRN1Q9NPD7 142 aa3.4□□□□□ -1.86
USP16-205ENST00000474835 TMEM9BQ9NQ34 198 aa3.4□□□□□ -1.86
USP16-205ENST00000474835 WDR83OSQ9Y284 106 aa3.4□□□□□ -1.86
USP16-205ENST00000474835 A0A0J9YY10 115 aa3.4□□□□□ -1.87
USP16-205ENST00000474835 A0A1B0GX78 115 aa3.4□□□□□ -1.87
USP16-205ENST00000474835 SIVA1O15304 175 aa3.4□□□□□ -1.87
USP16-205ENST00000474835 HOXA2O43364 376 aa3.4□□□□□ -1.87
USP16-205ENST00000474835 CNOT4O95628 575 aaKnown RBP3.4□□□□□ -1.87
USP16-205ENST00000474835 IGHEP01854 428 aa3.4□□□□□ -1.87
USP16-205ENST00000474835 NKX2-1P43699 371 aaPredicted RBP3.4□□□□□ -1.87
USP16-205ENST00000474835 VDAC2P45880 294 aaPredicted RBP3.4□□□□□ -1.87
USP16-205ENST00000474835 GRB2P62993 217 aaKnown RBP3.4□□□□□ -1.87
USP16-205ENST00000474835 MAJINQ3KP22 176 aa3.4□□□□□ -1.87
USP16-205ENST00000474835 UNQ5815/PRO19632Q6UWF5 114 aa3.4□□□□□ -1.87
USP16-205ENST00000474835 CMTM2Q8TAZ6 248 aa3.4□□□□□ -1.87
USP16-205ENST00000474835 TSEN15Q8WW01 171 aaKnown RBP3.4□□□□□ -1.87
USP16-205ENST00000474835 TECTBQ96PL2 329 aa3.4□□□□□ -1.87
USP16-205ENST00000474835 ZFYVE21Q9BQ24 234 aa3.4□□□□□ -1.87
USP16-205ENST00000474835 TMEM204Q9BSN7 226 aa3.4□□□□□ -1.87
USP16-205ENST00000474835 CLEC7AQ9BXN2 247 aa3.4□□□□□ -1.87
USP16-205ENST00000474835 OSTCQ9NRP0 149 aa3.4□□□□□ -1.87
USP16-205ENST00000474835 KLF12Q9Y4X4 402 aa3.4□□□□□ -1.87
USP16-205ENST00000474835 SHANK1Q9Y566 2161 aa3.4□□□□□ -1.87
USP16-205ENST00000474835 LINC00312Q9Y6C7 94 aa3.4□□□□□ -1.87
USP16-205ENST00000474835 TDRD6O60522 2096 aaKnown RBP3.4□□□□□ -1.87
USP16-205ENST00000474835 ARHGEF17Q96PE2 2063 aaPredicted RBP3.4□□□□□ -1.87
USP16-205ENST00000474835 MGAQ8IWI9 3026 aa3.4□□□□□ -1.87
USP16-205ENST00000474835 A0A1W2PRS3 328 aa3.4□□□□□ -1.87
USP16-205ENST00000474835 C15orf62A8K5M9 175 aa3.4□□□□□ -1.87
USP16-205ENST00000474835 M0QZ92 97 aa3.4□□□□□ -1.87
USP16-205ENST00000474835 ISLRO14498 428 aa3.4□□□□□ -1.87
USP16-205ENST00000474835 CHST1O43916 411 aa3.4□□□□□ -1.87
USP16-205ENST00000474835 SLC16A7O60669 478 aa3.4□□□□□ -1.87
USP16-205ENST00000474835 ZNF253O75346 499 aa3.4□□□□□ -1.87
USP16-205ENST00000474835 ZNF737O75373 536 aa3.4□□□□□ -1.87
USP16-205ENST00000474835 MMP7P09237 267 aaPredicted RBP3.4□□□□□ -1.87
USP16-205ENST00000474835 CRYBB3P26998 211 aa3.4□□□□□ -1.87
USP16-205ENST00000474835 TPPP2P59282 170 aa3.4□□□□□ -1.87
USP16-205ENST00000474835 RAB11AP62491 216 aa3.4□□□□□ -1.87
USP16-205ENST00000474835 FFAR4Q5NUL3 377 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms