RNA–Protein interactions for RNA: ENST00000474543.5

NELFCD-204, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 5

Gene NELFCD, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-204ENST00000474543 WDR86Q86TI4 376 aa12.15□□□□□ -0.46
NELFCD-204ENST00000474543 PINX1Q96BK5 328 aaKnown RBP12.15□□□□□ -0.46
NELFCD-204ENST00000474543 MAP1LC3BQ9GZQ8 125 aa12.15□□□□□ -0.46
NELFCD-204ENST00000474543 CACNA1GO43497 2377 aa12.15□□□□□ -0.46
NELFCD-204ENST00000474543 NBEAQ8NFP9 2946 aa12.15□□□□□ -0.46
NELFCD-204ENST00000474543 TRBV24-1A0A075B6N3 115 aa12.15□□□□□ -0.47
NELFCD-204ENST00000474543 TGOLN2O43493 480 aa12.15□□□□□ -0.47
NELFCD-204ENST00000474543 PTBP3O95758 552 aaKnown RBP12.15□□□□□ -0.47
NELFCD-204ENST00000474543 CEACAM6P40199 344 aa12.15□□□□□ -0.47
NELFCD-204ENST00000474543 ELLP55199 621 aaPredicted RBP12.15□□□□□ -0.47
NELFCD-204ENST00000474543 OR1C1Q15619 314 aa12.15□□□□□ -0.47
NELFCD-204ENST00000474543 WDR25Q64LD2 544 aaPredicted RBP12.15□□□□□ -0.47
NELFCD-204ENST00000474543 FGFRL1Q8N441 504 aa12.15□□□□□ -0.47
NELFCD-204ENST00000474543 DRAM1Q8N682 238 aa12.15□□□□□ -0.47
NELFCD-204ENST00000474543 TMEM251Q8N6I4 163 aa12.15□□□□□ -0.47
NELFCD-204ENST00000474543 TAF15Q92804 592 aaKnown RBP eCLIP12.15□□□□□ -0.47
NELFCD-204ENST00000474543 PFDN5Q99471 154 aa12.15□□□□□ -0.47
NELFCD-204ENST00000474543 RBKSQ9H477 322 aa12.15□□□□□ -0.47
NELFCD-204ENST00000474543 GP6Q9HCN6 339 aa12.15□□□□□ -0.47
NELFCD-204ENST00000474543 PLA2G3Q9NZ20 509 aa12.15□□□□□ -0.47
NELFCD-204ENST00000474543 MED13Q9UHV7 2174 aa12.14□□□□□ -0.47
NELFCD-204ENST00000474543 ZNF737O75373 536 aa12.14□□□□□ -0.47
NELFCD-204ENST00000474543 IL18BPO95998 194 aa12.14□□□□□ -0.47
NELFCD-204ENST00000474543 OPN1MWP04001 364 aa12.14□□□□□ -0.47
NELFCD-204ENST00000474543 OPN1MW2P0DN77 364 aa12.14□□□□□ -0.47
NELFCD-204ENST00000474543 OPN1MW3P0DN78 364 aa12.14□□□□□ -0.47
NELFCD-204ENST00000474543 ERVK11-1P61568 191 aa12.14□□□□□ -0.47
NELFCD-204ENST00000474543 SLC38A11Q08AI6 406 aa12.14□□□□□ -0.47
NELFCD-204ENST00000474543 PMS2P11Q13670 270 aa12.14□□□□□ -0.47
NELFCD-204ENST00000474543 C4orf17Q53FE4 359 aa12.14□□□□□ -0.47
NELFCD-204ENST00000474543 FAM180AQ6UWF9 173 aa12.14□□□□□ -0.47
NELFCD-204ENST00000474543 RPP25LQ8N5L8 163 aaKnown RBP12.14□□□□□ -0.47
NELFCD-204ENST00000474543 CTDSP1Q9GZU7 261 aa12.14□□□□□ -0.47
NELFCD-204ENST00000474543 PRDM13Q9H4Q3 707 aa12.14□□□□□ -0.47
NELFCD-204ENST00000474543 UBE2L5PA0A1B0GUS4 154 aa12.13□□□□□ -0.47
NELFCD-204ENST00000474543 OR5H1A6NKK0 313 aa12.13□□□□□ -0.47
NELFCD-204ENST00000474543 IFNA1P01562 189 aa12.13□□□□□ -0.47
NELFCD-204ENST00000474543 IGKV1D-33P01593 117 aa12.13□□□□□ -0.47
NELFCD-204ENST00000474543 IGKV1-33P01594 117 aa12.13□□□□□ -0.47
NELFCD-204ENST00000474543 PGA5P0DJD9 388 aa12.13□□□□□ -0.47
NELFCD-204ENST00000474543 TMEM14EPQ6UXP3 125 aa12.13□□□□□ -0.47
NELFCD-204ENST00000474543 MYPOPQ86VE0 399 aaPredicted RBP12.13□□□□□ -0.47
NELFCD-204ENST00000474543 MCEMP1Q8IX19 187 aa12.13□□□□□ -0.47
NELFCD-204ENST00000474543 SCCPDHQ8NBX0 429 aa12.13□□□□□ -0.47
NELFCD-204ENST00000474543 FER1L6-AS2Q96M78 137 aa12.13□□□□□ -0.47
NELFCD-204ENST00000474543 RTL8AQ9BWD3 113 aa12.13□□□□□ -0.47
NELFCD-204ENST00000474543 C12orf49Q9H741 205 aa12.13□□□□□ -0.47
NELFCD-204ENST00000474543 MBNL3Q9NUK0 354 aaKnown RBP12.13□□□□□ -0.47
NELFCD-204ENST00000474543 SLC39A9Q9NUM3 307 aa12.13□□□□□ -0.47
NELFCD-204ENST00000474543 ATMQ13315 3056 aa12.13□□□□□ -0.47
NELFCD-204ENST00000474543 PIEZO2Q9H5I5 2752 aa12.13□□□□□ -0.47
NELFCD-204ENST00000474543 FAM90A26D6RGX4 464 aa12.13□□□□□ -0.47
NELFCD-204ENST00000474543 HIST1H1BP16401 226 aaKnown RBP12.13□□□□□ -0.47
NELFCD-204ENST00000474543 CD81P60033 236 aa12.13□□□□□ -0.47
NELFCD-204ENST00000474543 TBR1Q16650 682 aa12.13□□□□□ -0.47
NELFCD-204ENST00000474543 OR8G2PQ6IF36 304 aa12.13□□□□□ -0.47
NELFCD-204ENST00000474543 MDP1Q86V88 176 aa12.13□□□□□ -0.47
NELFCD-204ENST00000474543 BCL2L2Q92843 193 aaPredicted RBP12.13□□□□□ -0.47
NELFCD-204ENST00000474543 LHX4Q969G2 390 aa12.13□□□□□ -0.47
NELFCD-204ENST00000474543 WIPI2Q9Y4P8 454 aa12.13□□□□□ -0.47
NELFCD-204ENST00000474543 GTF3C1Q12789 2109 aa12.12□□□□□ -0.47
NELFCD-204ENST00000474543 KMT2BQ9UMN6 2715 aaPredicted RBP12.12□□□□□ -0.47
NELFCD-204ENST00000474543 FABP4P15090 132 aa12.12□□□□□ -0.47
NELFCD-204ENST00000474543 PLGLB1Q02325 96 aa12.12□□□□□ -0.47
NELFCD-204ENST00000474543 TNFRSF9Q07011 255 aa12.12□□□□□ -0.47
NELFCD-204ENST00000474543 DCAF10Q5QP82 559 aa12.12□□□□□ -0.47
NELFCD-204ENST00000474543 AGMATQ9BSE5 352 aa12.12□□□□□ -0.47
NELFCD-204ENST00000474543 CDH20Q9HBT6 801 aa12.12□□□□□ -0.47
NELFCD-204ENST00000474543 NAT8Q9UHE5 227 aa12.12□□□□□ -0.47
NELFCD-204ENST00000474543 TIMM9Q9Y5J7 89 aa12.12□□□□□ -0.47
NELFCD-204ENST00000474543 USF3Q68DE3 2245 aa12.12□□□□□ -0.47
NELFCD-204ENST00000474543 DOCK11Q5JSL3 2073 aa12.12□□□□□ -0.47
NELFCD-204ENST00000474543 CLDN1O95832 211 aa12.11□□□□□ -0.47
NELFCD-204ENST00000474543 MDKP21741 143 aaPredicted RBP12.11□□□□□ -0.47
NELFCD-204ENST00000474543 ZNF146Q15072 292 aa12.11□□□□□ -0.47
NELFCD-204ENST00000474543 LINC00696Q6ZRV3 163 aa12.11□□□□□ -0.47
NELFCD-204ENST00000474543 CENPVQ7Z7K6 275 aaPredicted RBP12.11□□□□□ -0.47
NELFCD-204ENST00000474543 Q8IYB0 196 aa12.11□□□□□ -0.47
NELFCD-204ENST00000474543 SMIM7Q9BQ49 75 aa12.11□□□□□ -0.47
NELFCD-204ENST00000474543 RNF212BA8MTL3 300 aa12.11□□□□□ -0.47
NELFCD-204ENST00000474543 CDIPTO14735 213 aa12.11□□□□□ -0.47
NELFCD-204ENST00000474543 RAMP3O60896 148 aa12.11□□□□□ -0.47
NELFCD-204ENST00000474543 CD55P08174 381 aa12.11□□□□□ -0.47
NELFCD-204ENST00000474543 CCL11P51671 97 aa12.11□□□□□ -0.47
NELFCD-204ENST00000474543 MEF2BQ02080 365 aaPredicted RBP12.11□□□□□ -0.47
NELFCD-204ENST00000474543 HNF4GQ14541 408 aa12.11□□□□□ -0.47
NELFCD-204ENST00000474543 ADIRFQ15847 76 aa12.11□□□□□ -0.47
NELFCD-204ENST00000474543 ACSM6Q6P461 480 aa12.11□□□□□ -0.47
NELFCD-204ENST00000474543 CYP2G1PQ6ZSU1 146 aa12.11□□□□□ -0.47
NELFCD-204ENST00000474543 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.11□□□□□ -0.47
NELFCD-204ENST00000474543 HSPB7Q9UBY9 170 aa12.11□□□□□ -0.47
NELFCD-204ENST00000474543 POLDIP2Q9Y2S7 368 aa12.11□□□□□ -0.47
NELFCD-204ENST00000474543 ZFYVE26Q68DK2 2539 aa12.1□□□□□ -0.47
NELFCD-204ENST00000474543 SH2D1BO14796 132 aa12.1□□□□□ -0.47
NELFCD-204ENST00000474543 NXPH2O95156 264 aa12.1□□□□□ -0.47
NELFCD-204ENST00000474543 PFN1P07737 140 aaKnown RBP12.1□□□□□ -0.47
NELFCD-204ENST00000474543 TMEM241Q24JQ0 296 aa12.1□□□□□ -0.47
NELFCD-204ENST00000474543 DNLZQ5SXM8 178 aa12.1□□□□□ -0.47
NELFCD-204ENST00000474543 FBXW9Q5XUX1 488 aa12.1□□□□□ -0.47
NELFCD-204ENST00000474543 NCR3LG1Q68D85 454 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms