RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 VN1R1Q9GZP7 353 aa6.18□□□□□ -1.42
GPNMB-209ENST00000474157 ARRDC1-AS1Q9H2J1 176 aa6.18□□□□□ -1.42
GPNMB-209ENST00000474157 DSPP15924 2871 aaKnown RBP6.18□□□□□ -1.42
GPNMB-209ENST00000474157 FANCMQ8IYD8 2048 aa6.18□□□□□ -1.42
GPNMB-209ENST00000474157 TRGV11A0A075B6L2 103 aa6.17□□□□□ -1.42
GPNMB-209ENST00000474157 A0A087WUU8 490 aa6.17□□□□□ -1.42
GPNMB-209ENST00000474157 A0A087WX48 190 aa6.17□□□□□ -1.42
GPNMB-209ENST00000474157 LOC102724200A0A096LPH7 203 aaPredicted RBP6.17□□□□□ -1.42
GPNMB-209ENST00000474157 KIR2DS1A0A191URI9 304 aa6.17□□□□□ -1.42
GPNMB-209ENST00000474157 SMIM9A6NGZ8 99 aa6.17□□□□□ -1.42
GPNMB-209ENST00000474157 MSGN1A6NI15 193 aa6.17□□□□□ -1.42
GPNMB-209ENST00000474157 SLC38A8A6NNN8 435 aa6.17□□□□□ -1.42
GPNMB-209ENST00000474157 H7C1C5 153 aa6.17□□□□□ -1.42
GPNMB-209ENST00000474157 M0R2Z0 102 aa6.17□□□□□ -1.42
GPNMB-209ENST00000474157 ERI3O43414 337 aaKnown RBP6.17□□□□□ -1.42
GPNMB-209ENST00000474157 TRIAP1O43715 76 aa6.17□□□□□ -1.42
GPNMB-209ENST00000474157 SYNGR3O43761 229 aa6.17□□□□□ -1.42
GPNMB-209ENST00000474157 DEDDO75618 318 aa6.17□□□□□ -1.42
GPNMB-209ENST00000474157 CEACAM4O75871 244 aa6.17□□□□□ -1.42
GPNMB-209ENST00000474157 SOX14O95416 240 aa6.17□□□□□ -1.42
GPNMB-209ENST00000474157 TNFP01375 233 aa6.17□□□□□ -1.42
GPNMB-209ENST00000474157 ADH4P08319 380 aa6.17□□□□□ -1.42
GPNMB-209ENST00000474157 PLA2G2AP14555 144 aa6.17□□□□□ -1.42
GPNMB-209ENST00000474157 GATA3P23771 443 aa6.17□□□□□ -1.42
GPNMB-209ENST00000474157 PPIFP30405 207 aaKnown RBP6.17□□□□□ -1.42
GPNMB-209ENST00000474157 OPRM1P35372 400 aa6.17□□□□□ -1.42
GPNMB-209ENST00000474157 APOBEC1P41238 236 aaKnown RBP6.17□□□□□ -1.42
GPNMB-209ENST00000474157 FRKP42685 505 aaPredicted RBP6.17□□□□□ -1.42
GPNMB-209ENST00000474157 RPL34P49207 117 aaKnown RBP6.17□□□□□ -1.42
GPNMB-209ENST00000474157 GNB2P62879 340 aa6.17□□□□□ -1.42
GPNMB-209ENST00000474157 EWSR1Q01844 656 aaKnown RBP eCLIP6.17□□□□□ -1.42
GPNMB-209ENST00000474157 IL13RA2Q14627 380 aa6.17□□□□□ -1.42
GPNMB-209ENST00000474157 INSL4Q14641 139 aa6.17□□□□□ -1.42
GPNMB-209ENST00000474157 KIR2DS1Q14954 304 aa6.17□□□□□ -1.42
GPNMB-209ENST00000474157 SGCBQ16585 318 aa6.17□□□□□ -1.42
GPNMB-209ENST00000474157 CDO1Q16878 200 aa6.17□□□□□ -1.42
GPNMB-209ENST00000474157 LRRC75BQ2VPJ9 315 aa6.17□□□□□ -1.42
GPNMB-209ENST00000474157 TPRG1Q6ZUI0 275 aa6.17□□□□□ -1.42
GPNMB-209ENST00000474157 SAXO1Q8IYX7 474 aa6.17□□□□□ -1.42
GPNMB-209ENST00000474157 CA13Q8N1Q1 262 aa6.17□□□□□ -1.42
GPNMB-209ENST00000474157 Q8N976 141 aa6.17□□□□□ -1.42
GPNMB-209ENST00000474157 OR5H2Q8NGV7 314 aa6.17□□□□□ -1.42
GPNMB-209ENST00000474157 OR2G3Q8NGZ4 309 aa6.17□□□□□ -1.42
GPNMB-209ENST00000474157 CLDND2Q8NHS1 167 aa6.17□□□□□ -1.42
GPNMB-209ENST00000474157 DAZLQ92904 295 aaKnown RBP6.17□□□□□ -1.42
GPNMB-209ENST00000474157 FGF14Q92915 247 aa6.17□□□□□ -1.42
GPNMB-209ENST00000474157 IGSF8Q969P0 613 aa6.17□□□□□ -1.42
GPNMB-209ENST00000474157 NEIL2Q969S2 332 aa6.17□□□□□ -1.42
GPNMB-209ENST00000474157 APOBEC3DQ96AK3 386 aaPredicted RBP6.17□□□□□ -1.42
GPNMB-209ENST00000474157 VSTM2LQ96N03 204 aa6.17□□□□□ -1.42
GPNMB-209ENST00000474157 DGAT2Q96PD7 388 aa6.17□□□□□ -1.42
GPNMB-209ENST00000474157 GGTLC1Q9BX51 225 aa6.17□□□□□ -1.42
GPNMB-209ENST00000474157 CST11Q9H112 138 aa6.17□□□□□ -1.42
GPNMB-209ENST00000474157 NXF5Q9H1B4 397 aaKnown RBP6.17□□□□□ -1.42
GPNMB-209ENST00000474157 TMEM74BQ9NUR3 256 aa6.17□□□□□ -1.42
GPNMB-209ENST00000474157 TMEM30AQ9NV96 361 aa6.17□□□□□ -1.42
GPNMB-209ENST00000474157 THAP10Q9P2Z0 257 aaPredicted RBP6.17□□□□□ -1.42
GPNMB-209ENST00000474157 DKK4Q9UBT3 224 aa6.17□□□□□ -1.42
GPNMB-209ENST00000474157 IER3IP1Q9Y5U9 82 aa6.17□□□□□ -1.42
GPNMB-209ENST00000474157 TSC2P49815 1807 aa6.16□□□□□ -1.42
GPNMB-209ENST00000474157 SMG1Q96Q15 3661 aaKnown RBP6.16□□□□□ -1.42
GPNMB-209ENST00000474157 ODAMA1E959 279 aa6.16□□□□□ -1.42
GPNMB-209ENST00000474157 GLOD5A6NK44 160 aa6.16□□□□□ -1.42
GPNMB-209ENST00000474157 ZNF732B4DXR9 585 aa6.16□□□□□ -1.42
GPNMB-209ENST00000474157 ZNF878C9JN71 531 aa6.16□□□□□ -1.42
GPNMB-209ENST00000474157 P2RY10O00398 339 aa6.16□□□□□ -1.42
GPNMB-209ENST00000474157 MT-ND6P03923 174 aa6.16□□□□□ -1.42
GPNMB-209ENST00000474157 CATP04040 527 aaKnown RBP6.16□□□□□ -1.42
GPNMB-209ENST00000474157 CT45A10P0DMU9 189 aa6.16□□□□□ -1.42
GPNMB-209ENST00000474157 COX7A2P14406 83 aa6.16□□□□□ -1.42
GPNMB-209ENST00000474157 CRISP2P16562 243 aa6.16□□□□□ -1.42
GPNMB-209ENST00000474157 PGCP20142 388 aa6.16□□□□□ -1.42
GPNMB-209ENST00000474157 CSRP1P21291 193 aaKnown RBP6.16□□□□□ -1.42
GPNMB-209ENST00000474157 AADACP22760 399 aa6.16□□□□□ -1.42
GPNMB-209ENST00000474157 NSG1P42857 185 aa6.16□□□□□ -1.42
GPNMB-209ENST00000474157 TSFMP43897 325 aaKnown RBP6.16□□□□□ -1.42
GPNMB-209ENST00000474157 OR1E2P47887 323 aa6.16□□□□□ -1.42
GPNMB-209ENST00000474157 PGGT1BP53609 377 aa6.16□□□□□ -1.42
GPNMB-209ENST00000474157 FOXG1P55316 489 aaPredicted RBP6.16□□□□□ -1.42
GPNMB-209ENST00000474157 KLRD1Q13241 179 aa6.16□□□□□ -1.42
GPNMB-209ENST00000474157 FAM90A2PQ658T7 463 aa6.16□□□□□ -1.42
GPNMB-209ENST00000474157 TRNP1Q6NT89 227 aa6.16□□□□□ -1.42
GPNMB-209ENST00000474157 PARM1Q6UWI2 310 aa6.16□□□□□ -1.42
GPNMB-209ENST00000474157 ZNF547Q8IVP9 402 aa6.16□□□□□ -1.42
GPNMB-209ENST00000474157 SCCPDHQ8NBX0 429 aa6.16□□□□□ -1.42
GPNMB-209ENST00000474157 OR5AR1Q8NGP9 310 aa6.16□□□□□ -1.42
GPNMB-209ENST00000474157 ATP6V0E2Q8NHE4 81 aa6.16□□□□□ -1.42
GPNMB-209ENST00000474157 C16orf52Q8NHV5 167 aa6.16□□□□□ -1.42
GPNMB-209ENST00000474157 FAM213BQ8TBF2 198 aa6.16□□□□□ -1.42
GPNMB-209ENST00000474157 OR51E1Q8TCB6 317 aa6.16□□□□□ -1.42
GPNMB-209ENST00000474157 C18orf32Q8TCD1 76 aa6.16□□□□□ -1.42
GPNMB-209ENST00000474157 EMG1Q92979 244 aaKnown RBP6.16□□□□□ -1.42
GPNMB-209ENST00000474157 BORCS7Q96B45 105 aa6.16□□□□□ -1.42
GPNMB-209ENST00000474157 RNF183Q96D59 192 aa6.16□□□□□ -1.42
GPNMB-209ENST00000474157 OXGR1Q96P68 337 aa6.16□□□□□ -1.42
GPNMB-209ENST00000474157 TNFRSF13CQ96RJ3 184 aa6.16□□□□□ -1.42
GPNMB-209ENST00000474157 VN1R3Q9BXE9 311 aa6.16□□□□□ -1.42
GPNMB-209ENST00000474157 ISG20L2Q9H9L3 353 aaKnown RBP6.16□□□□□ -1.42
GPNMB-209ENST00000474157 PIGVQ9NUD9 493 aa6.16□□□□□ -1.42
GPNMB-209ENST00000474157 HCFC1R1Q9NWW0 138 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms