RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 KIAA1456Q9P272 454 aa10.96□□□□□ -0.65
USF1-205ENST00000473969 SH2D7A6NKC9 451 aaPredicted RBP10.95□□□□□ -0.66
USF1-205ENST00000473969 J3QRK9 145 aa10.95□□□□□ -0.66
USF1-205ENST00000473969 SLC22A5O76082 557 aa10.95□□□□□ -0.66
USF1-205ENST00000473969 FCER2P06734 321 aa10.95□□□□□ -0.66
USF1-205ENST00000473969 CT45A6P0DMU7 189 aa10.95□□□□□ -0.66
USF1-205ENST00000473969 CT45A5P0DMU8 189 aa10.95□□□□□ -0.66
USF1-205ENST00000473969 CT45A7P0DMV0 189 aa10.95□□□□□ -0.66
USF1-205ENST00000473969 PTHLHP12272 177 aa10.95□□□□□ -0.66
USF1-205ENST00000473969 ELK1P19419 428 aa10.95□□□□□ -0.66
USF1-205ENST00000473969 NFYAP23511 347 aaPredicted RBP10.95□□□□□ -0.66
USF1-205ENST00000473969 MMDQ15546 238 aa10.95□□□□□ -0.66
USF1-205ENST00000473969 FBLN7Q53RD9 439 aa10.95□□□□□ -0.66
USF1-205ENST00000473969 FAM131AQ6UXB0 335 aa10.95□□□□□ -0.66
USF1-205ENST00000473969 CENPVQ7Z7K6 275 aaPredicted RBP10.95□□□□□ -0.66
USF1-205ENST00000473969 SNX29P2Q8IUI4 249 aa10.95□□□□□ -0.66
USF1-205ENST00000473969 GVQW1Q8N7I0 195 aa10.95□□□□□ -0.66
USF1-205ENST00000473969 C5orf56Q8N8D9 126 aa10.95□□□□□ -0.66
USF1-205ENST00000473969 ISOC1Q96CN7 298 aa10.95□□□□□ -0.66
USF1-205ENST00000473969 CITED1Q99966 193 aa10.95□□□□□ -0.66
USF1-205ENST00000473969 GAB2Q9UQC2 676 aa10.95□□□□□ -0.66
USF1-205ENST00000473969 WASHC3Q9Y3C0 194 aa10.95□□□□□ -0.66
USF1-205ENST00000473969 OR2W1Q9Y3N9 320 aa10.95□□□□□ -0.66
USF1-205ENST00000473969 MEIS3P1A6NDR6 274 aa10.94□□□□□ -0.66
USF1-205ENST00000473969 RBBP9O75884 186 aa10.94□□□□□ -0.66
USF1-205ENST00000473969 ACTBP60709 375 aa10.94□□□□□ -0.66
USF1-205ENST00000473969 TAGLNQ01995 201 aaKnown RBP10.94□□□□□ -0.66
USF1-205ENST00000473969 SRSF4Q08170 494 aaKnown RBP10.94□□□□□ -0.66
USF1-205ENST00000473969 GLDNQ6ZMI3 551 aaPredicted RBP10.94□□□□□ -0.66
USF1-205ENST00000473969 Q6ZS46 218 aa10.94□□□□□ -0.66
USF1-205ENST00000473969 FOXRED2Q8IWF2 684 aa10.94□□□□□ -0.66
USF1-205ENST00000473969 Q8N6K4 173 aa10.94□□□□□ -0.66
USF1-205ENST00000473969 DRAXINQ8NBI3 349 aaPredicted RBP10.94□□□□□ -0.66
USF1-205ENST00000473969 OR5AP2Q8NGF4 316 aa10.94□□□□□ -0.66
USF1-205ENST00000473969 C15orf40Q8WUR7 153 aa10.94□□□□□ -0.66
USF1-205ENST00000473969 SCPEP1Q9HB40 452 aa10.94□□□□□ -0.66
USF1-205ENST00000473969 SERTAD4Q9NUC0 356 aa10.94□□□□□ -0.66
USF1-205ENST00000473969 LIN7CQ9NUP9 197 aaKnown RBP10.94□□□□□ -0.66
USF1-205ENST00000473969 CCDC59Q9P031 241 aaKnown RBP10.94□□□□□ -0.66
USF1-205ENST00000473969 EXTL2Q9UBQ6 330 aa10.94□□□□□ -0.66
USF1-205ENST00000473969 H0YJW9 148 aa10.93□□□□□ -0.66
USF1-205ENST00000473969 H3BMQ9 156 aa10.93□□□□□ -0.66
USF1-205ENST00000473969 M0QZ24 198 aa10.93□□□□□ -0.66
USF1-205ENST00000473969 KCNAB3O43448 404 aa10.93□□□□□ -0.66
USF1-205ENST00000473969 FBXO24O75426 580 aa10.93□□□□□ -0.66
USF1-205ENST00000473969 AMY1AP04745 511 aa10.93□□□□□ -0.66
USF1-205ENST00000473969 AMY2AP04746 511 aa10.93□□□□□ -0.66
USF1-205ENST00000473969 OR5H8P0DN80 308 aa10.93□□□□□ -0.66
USF1-205ENST00000473969 THBS3P49746 956 aa10.93□□□□□ -0.66
USF1-205ENST00000473969 TAS2R46P59540 309 aa10.93□□□□□ -0.66
USF1-205ENST00000473969 CDK10Q15131 360 aa10.93□□□□□ -0.66
USF1-205ENST00000473969 PLGLAQ15195 96 aa10.93□□□□□ -0.66
USF1-205ENST00000473969 SLC35E3Q7Z769 313 aa10.93□□□□□ -0.66
USF1-205ENST00000473969 Q8N9W7 124 aa10.93□□□□□ -0.66
USF1-205ENST00000473969 OR5AN1Q8NGI8 311 aa10.93□□□□□ -0.66
USF1-205ENST00000473969 ADTRPQ96IZ2 230 aa10.93□□□□□ -0.66
USF1-205ENST00000473969 RNF5Q99942 180 aa10.93□□□□□ -0.66
USF1-205ENST00000473969 SDHAF2Q9NX18 166 aa10.93□□□□□ -0.66
USF1-205ENST00000473969 NBEAL1Q6ZS30 2694 aa10.92□□□□□ -0.66
USF1-205ENST00000473969 SULT1C2O00338 296 aa10.92□□□□□ -0.66
USF1-205ENST00000473969 NBR2O15453 112 aa10.92□□□□□ -0.66
USF1-205ENST00000473969 HLA-DQB1P01920 261 aa10.92□□□□□ -0.66
USF1-205ENST00000473969 RRASP10301 218 aa10.92□□□□□ -0.66
USF1-205ENST00000473969 FCGR2CP31995 323 aa10.92□□□□□ -0.66
USF1-205ENST00000473969 F2RL1P55085 397 aa10.92□□□□□ -0.66
USF1-205ENST00000473969 RPS16P62249 146 aaKnown RBP10.92□□□□□ -0.66
USF1-205ENST00000473969 RTL8BQ17RB0 113 aa10.92□□□□□ -0.66
USF1-205ENST00000473969 TMEM95Q3KNT9 176 aa10.92□□□□□ -0.66
USF1-205ENST00000473969 PDPNQ86YL7 162 aa10.92□□□□□ -0.66
USF1-205ENST00000473969 ZNF645Q8N7E2 425 aa10.92□□□□□ -0.66
USF1-205ENST00000473969 C11orf44Q8N8P7 122 aa10.92□□□□□ -0.66
USF1-205ENST00000473969 OR5H2Q8NGV7 314 aa10.92□□□□□ -0.66
USF1-205ENST00000473969 DYNC2LI1Q8TCX1 351 aa10.92□□□□□ -0.66
USF1-205ENST00000473969 CHPT1Q8WUD6 406 aa10.92□□□□□ -0.66
USF1-205ENST00000473969 FLYWCH2Q96CP2 140 aaKnown RBP10.92□□□□□ -0.66
USF1-205ENST00000473969 TSNAXQ99598 290 aaKnown RBP10.92□□□□□ -0.66
USF1-205ENST00000473969 GON7Q9BXV9 100 aa10.92□□□□□ -0.66
USF1-205ENST00000473969 C6orf62Q9GZU0 229 aaPredicted RBP10.92□□□□□ -0.66
USF1-205ENST00000473969 SLC35D1Q9NTN3 355 aa10.92□□□□□ -0.66
USF1-205ENST00000473969 EHFQ9NZC4 300 aa10.92□□□□□ -0.66
USF1-205ENST00000473969 CEPT1Q9Y6K0 416 aa10.92□□□□□ -0.66
USF1-205ENST00000473969 AP4M1O00189 453 aa10.91□□□□□ -0.66
USF1-205ENST00000473969 TUSC2O75896 110 aa10.91□□□□□ -0.66
USF1-205ENST00000473969 TPPPO94811 219 aa10.91□□□□□ -0.66
USF1-205ENST00000473969 KRTAP10-3P60369 221 aa10.91□□□□□ -0.66
USF1-205ENST00000473969 HERV-K104P61576 105 aa10.91□□□□□ -0.66
USF1-205ENST00000473969 SLC35B1P78383 322 aa10.91□□□□□ -0.66
USF1-205ENST00000473969 OR5AU1Q8NGC0 362 aa10.91□□□□□ -0.66
USF1-205ENST00000473969 OR4X2Q8NGF9 303 aa10.91□□□□□ -0.66
USF1-205ENST00000473969 GPX8Q8TED1 209 aa10.91□□□□□ -0.66
USF1-205ENST00000473969 WNT10AQ9GZT5 417 aa10.91□□□□□ -0.66
USF1-205ENST00000473969 PLSCR3Q9NRY6 295 aa10.91□□□□□ -0.66
USF1-205ENST00000473969 RSL24D1Q9UHA3 163 aaKnown RBP10.91□□□□□ -0.66
USF1-205ENST00000473969 ZNF107Q9UII5 783 aaPredicted RBP10.91□□□□□ -0.66
USF1-205ENST00000473969 PRELID3BQ9Y3B1 194 aa10.91□□□□□ -0.66
USF1-205ENST00000473969 PSMB11A5LHX3 300 aa10.9□□□□□ -0.66
USF1-205ENST00000473969 CTDSP2O14595 271 aa10.9□□□□□ -0.66
USF1-205ENST00000473969 PROP1O75360 226 aa10.9□□□□□ -0.66
USF1-205ENST00000473969 IGHG2P01859 326 aa10.9□□□□□ -0.66
USF1-205ENST00000473969 PMP2P02689 132 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms