RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 PDPNQ86YL7 162 aa10.45□□□□□ -0.74
CHD3-209ENST00000473376 MUC7Q8TAX7 377 aa10.45□□□□□ -0.74
CHD3-209ENST00000473376 ELOVL1Q9BW60 279 aa10.45□□□□□ -0.74
CHD3-209ENST00000473376 C11orf54Q9H0W9 315 aaPredicted RBP10.45□□□□□ -0.74
CHD3-209ENST00000473376 LPAR5Q9H1C0 372 aa10.45□□□□□ -0.74
CHD3-209ENST00000473376 FBXL15Q9H469 300 aa10.45□□□□□ -0.74
CHD3-209ENST00000473376 CHMP1AQ9HD42 196 aaPredicted RBP10.45□□□□□ -0.74
CHD3-209ENST00000473376 C12orf4Q9NQ89 552 aa10.45□□□□□ -0.74
CHD3-209ENST00000473376 LSM2Q9Y333 95 aaKnown RBP10.45□□□□□ -0.74
CHD3-209ENST00000473376 FBXO7Q9Y3I1 522 aa10.45□□□□□ -0.74
CHD3-209ENST00000473376 A0A0G2JLM5 398 aa10.44□□□□□ -0.74
CHD3-209ENST00000473376 FOXI3A8MTJ6 420 aaPredicted RBP10.44□□□□□ -0.74
CHD3-209ENST00000473376 H7C2Y5 167 aa10.44□□□□□ -0.74
CHD3-209ENST00000473376 SLC17A2O00624 439 aa10.44□□□□□ -0.74
CHD3-209ENST00000473376 ARL6IP5O75915 188 aa10.44□□□□□ -0.74
CHD3-209ENST00000473376 LY86O95711 162 aa10.44□□□□□ -0.74
CHD3-209ENST00000473376 ARSBP15848 533 aa10.44□□□□□ -0.74
CHD3-209ENST00000473376 ZP3P21754 424 aa10.44□□□□□ -0.74
CHD3-209ENST00000473376 CEACAM6P40199 344 aa10.44□□□□□ -0.74
CHD3-209ENST00000473376 LGALS7P47929 136 aa10.44□□□□□ -0.74
CHD3-209ENST00000473376 HLA-DRB3P79483 266 aa10.44□□□□□ -0.74
CHD3-209ENST00000473376 PSG5Q15238 335 aa10.44□□□□□ -0.74
CHD3-209ENST00000473376 ECSCRQ19T08 205 aa10.44□□□□□ -0.74
CHD3-209ENST00000473376 RPL39P5Q59GN2 51 aa10.44□□□□□ -0.74
CHD3-209ENST00000473376 OR10K2Q6IF99 312 aa10.44□□□□□ -0.74
CHD3-209ENST00000473376 CEACAM19Q7Z692 300 aa10.44□□□□□ -0.74
CHD3-209ENST00000473376 OR4C12Q96R67 309 aa10.44□□□□□ -0.74
CHD3-209ENST00000473376 RANGRFQ9HD47 186 aaPredicted RBP10.44□□□□□ -0.74
CHD3-209ENST00000473376 Q9N2K0 584 aa10.44□□□□□ -0.74
CHD3-209ENST00000473376 SCN3BQ9NY72 215 aa10.44□□□□□ -0.74
CHD3-209ENST00000473376 ZNF221Q9UK13 617 aa10.44□□□□□ -0.74
CHD3-209ENST00000473376 FCN1O00602 326 aa10.43□□□□□ -0.74
CHD3-209ENST00000473376 HSPA12AO43301 675 aa10.43□□□□□ -0.74
CHD3-209ENST00000473376 PROP1O75360 226 aa10.43□□□□□ -0.74
CHD3-209ENST00000473376 CPEP16870 476 aa10.43□□□□□ -0.74
CHD3-209ENST00000473376 PITPNAQ00169 270 aa10.43□□□□□ -0.74
CHD3-209ENST00000473376 TPBGQ13641 420 aa10.43□□□□□ -0.74
CHD3-209ENST00000473376 RCN1Q15293 331 aa10.43□□□□□ -0.74
CHD3-209ENST00000473376 UNQ5815/PRO19632Q6UWF5 114 aa10.43□□□□□ -0.74
CHD3-209ENST00000473376 SBSPONQ8IVN8 264 aa10.43□□□□□ -0.74
CHD3-209ENST00000473376 UFD1Q92890 307 aa10.43□□□□□ -0.74
CHD3-209ENST00000473376 RCHY1Q96PM5 261 aa10.43□□□□□ -0.74
CHD3-209ENST00000473376 OR5B12Q96R08 314 aa10.43□□□□□ -0.74
CHD3-209ENST00000473376 NICN1Q9BSH3 213 aa10.43□□□□□ -0.74
CHD3-209ENST00000473376 TMED9Q9BVK6 235 aa10.43□□□□□ -0.74
CHD3-209ENST00000473376 ZMAT4Q9H898 229 aa10.43□□□□□ -0.74
CHD3-209ENST00000473376 METTL1Q9UBP6 276 aaKnown RBP10.43□□□□□ -0.74
CHD3-209ENST00000473376 AK3Q9UIJ7 227 aa10.43□□□□□ -0.74
CHD3-209ENST00000473376 STUB1Q9UNE7 303 aa10.43□□□□□ -0.74
CHD3-209ENST00000473376 IGHV4OR15-8A0A075B7B6 117 aa10.42□□□□□ -0.74
CHD3-209ENST00000473376 A0A087WW49 117 aa10.42□□□□□ -0.74
CHD3-209ENST00000473376 A0A0A6YYD4 124 aa10.42□□□□□ -0.74
CHD3-209ENST00000473376 IGLV1-51P01701 117 aa10.42□□□□□ -0.74
CHD3-209ENST00000473376 APOA2P02652 100 aa10.42□□□□□ -0.74
CHD3-209ENST00000473376 FRMD6-AS1P0C7T7 363 aa10.42□□□□□ -0.74
CHD3-209ENST00000473376 SPNP16150 400 aa10.42□□□□□ -0.74
CHD3-209ENST00000473376 SLURP1P55000 103 aa10.42□□□□□ -0.74
CHD3-209ENST00000473376 INSL4Q14641 139 aa10.42□□□□□ -0.74
CHD3-209ENST00000473376 IRF3Q14653 427 aa10.42□□□□□ -0.74
CHD3-209ENST00000473376 P2RY14Q15391 338 aa10.42□□□□□ -0.74
CHD3-209ENST00000473376 CASC10Q5T4H9 136 aa10.42□□□□□ -0.74
CHD3-209ENST00000473376 C5orf24Q7Z6I8 188 aa10.42□□□□□ -0.74
CHD3-209ENST00000473376 LFNGQ8NES3 379 aa10.42□□□□□ -0.74
CHD3-209ENST00000473376 OR56B1Q8NGI3 324 aa10.42□□□□□ -0.74
CHD3-209ENST00000473376 OR4A4PQ8NGN8 299 aa10.42□□□□□ -0.74
CHD3-209ENST00000473376 ARPC1AQ92747 370 aa10.42□□□□□ -0.74
CHD3-209ENST00000473376 RBMXL1Q96E39 390 aaKnown RBP10.42□□□□□ -0.74
CHD3-209ENST00000473376 ABHD14BQ96IU4 210 aa10.42□□□□□ -0.74
CHD3-209ENST00000473376 ASCL2Q99929 193 aa10.42□□□□□ -0.74
CHD3-209ENST00000473376 SIGLEC8Q9NYZ4 499 aa10.42□□□□□ -0.74
CHD3-209ENST00000473376 TRDCB7Z8K6 153 aa10.41□□□□□ -0.74
CHD3-209ENST00000473376 SOCS1O15524 211 aa10.41□□□□□ -0.74
CHD3-209ENST00000473376 IGKV1-16P04430 117 aa10.41□□□□□ -0.74
CHD3-209ENST00000473376 AADACP22760 399 aa10.41□□□□□ -0.74
CHD3-209ENST00000473376 TMEM50BP56557 158 aa10.41□□□□□ -0.74
CHD3-209ENST00000473376 TPPP2P59282 170 aa10.41□□□□□ -0.74
CHD3-209ENST00000473376 FXYD3Q14802 87 aa10.41□□□□□ -0.74
CHD3-209ENST00000473376 SRSF7Q16629 238 aaKnown RBP eCLIP10.41□□□□□ -0.74
CHD3-209ENST00000473376 ZNF383Q8NA42 475 aa10.41□□□□□ -0.74
CHD3-209ENST00000473376 POC5Q8NA72 575 aa10.41□□□□□ -0.74
CHD3-209ENST00000473376 CITED4Q96RK1 184 aa10.41□□□□□ -0.74
CHD3-209ENST00000473376 TM2D3Q9BRN9 247 aa10.41□□□□□ -0.74
CHD3-209ENST00000473376 ALX4Q9H161 411 aaPredicted RBP10.41□□□□□ -0.74
CHD3-209ENST00000473376 DUSP21Q9H596 190 aa10.41□□□□□ -0.74
CHD3-209ENST00000473376 PLGRKTQ9HBL7 147 aa10.41□□□□□ -0.74
CHD3-209ENST00000473376 TPRKBQ9Y3C4 175 aa10.41□□□□□ -0.74
CHD3-209ENST00000473376 PTGES3LE9PB15 166 aa10.4□□□□□ -0.74
CHD3-209ENST00000473376 LDLRAD4O15165 306 aa10.4□□□□□ -0.74
CHD3-209ENST00000473376 CA2P00918 260 aa10.4□□□□□ -0.74
CHD3-209ENST00000473376 TRGV3P03979 118 aa10.4□□□□□ -0.74
CHD3-209ENST00000473376 SCTP09683 121 aa10.4□□□□□ -0.74
CHD3-209ENST00000473376 RRASP10301 218 aa10.4□□□□□ -0.74
CHD3-209ENST00000473376 RPS16P62249 146 aaKnown RBP10.4□□□□□ -0.74
CHD3-209ENST00000473376 MLLT11Q13015 90 aaPredicted RBP10.4□□□□□ -0.74
CHD3-209ENST00000473376 KLF5Q13887 457 aaPredicted RBP10.4□□□□□ -0.74
CHD3-209ENST00000473376 MED22Q15528 200 aa10.4□□□□□ -0.74
CHD3-209ENST00000473376 RAB11BQ15907 218 aa10.4□□□□□ -0.74
CHD3-209ENST00000473376 GLDNQ6ZMI3 551 aaPredicted RBP10.4□□□□□ -0.74
CHD3-209ENST00000473376 TMEM91Q6ZNR0 172 aa10.4□□□□□ -0.74
CHD3-209ENST00000473376 SETD6Q8TBK2 473 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms