RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 ZNF532Q9HCE3 1301 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 VCANP13611 3396 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 TMED7-TICAM2A0A0A6YYA0 188 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 TRAV19A0A0A6YYK7 116 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 A0A1B0GVX0 72 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 K7EM74 188 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 TAAR5O14804 337 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 PLIN3O60664 434 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 PTHP01270 115 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 PRB1P04280 392 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 ZNF823P16415 610 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 ZNF19P17023 458 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 APLNRP35414 380 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 KRTAP10-7P60409 375 aaPredicted RBP1.8□□□□□ -2.12
XRN1-210ENST00000472697 PRDX4Q13162 271 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 TMEM176BQ3YBM2 270 aaPredicted RBP1.8□□□□□ -2.12
XRN1-210ENST00000472697 Q499Y3 187 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 LCE1FQ5T754 118 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 LINC00596Q86U02 117 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 SMIM20Q8N5G0 67 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 MAPK1IP1LQ8NDC0 245 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 OR10D3Q8NH80 312 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 OR4A5Q8NH83 315 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 C15orf40Q8WUR7 153 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 ASB17Q8WXJ9 295 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 CEP170P1Q96L14 293 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 CEP19Q96LK0 163 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 NRIP2Q9BQI9 281 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 THTPAQ9BU02 230 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 SLC22A4Q9H015 551 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 TXNIPQ9H3M7 391 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 SS18L2Q9UHA2 77 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 ZNF225Q9UK10 706 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 POMPQ9Y244 141 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 PCLOQ9Y6V0 5065 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 ITPR1Q14643 2758 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 DOCK6Q96HP0 2047 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 ITPR3Q14573 2671 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 F5H5K5 113 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 H0YJW9 148 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 SLC16A4O15374 487 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 PIAS1O75925 651 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 HLA-DPB1P04440 258 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 C8orf88P0DMB2 117 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 S100A7P31151 101 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 CCR7P32248 378 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 TALDO1P37837 337 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 VSX2P58304 361 aaPredicted RBP1.8□□□□□ -2.12
XRN1-210ENST00000472697 RPS20P60866 119 aaKnown RBP1.8□□□□□ -2.12
XRN1-210ENST00000472697 SRSF6Q13247 344 aaKnown RBP1.8□□□□□ -2.12
XRN1-210ENST00000472697 PDGFRLQ15198 375 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 ZNF658BQ4V348 819 aaPredicted RBP1.8□□□□□ -2.12
XRN1-210ENST00000472697 LUZP6Q538Z0 58 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 MPV17L2Q567V2 206 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 HIST2H3PS2Q5TEC6 136 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 RSBN1Q5VWQ0 802 aaPredicted RBP1.8□□□□□ -2.12
XRN1-210ENST00000472697 LPCAT4Q643R3 524 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 EBLN2Q6P2I7 272 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 CCDC112Q8NEF3 446 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 OR10Z1Q8NGY1 313 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 NEK7Q8TDX7 302 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 TWIST2Q8WVJ9 160 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 FAM104AQ969W3 186 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 ZIM3Q96PE6 472 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 TBX5Q99593 518 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 SULT4A1Q9BR01 284 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 TRIM45Q9H8W5 580 aaPredicted RBP1.8□□□□□ -2.12
XRN1-210ENST00000472697 NOX3Q9HBY0 568 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 TMEM38BQ9NVV0 291 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 VNN3Q9NY84 501 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 DNAJC27Q9NZQ0 273 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 HES2Q9Y543 173 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 PCNX2A6NKB5 2137 aa1.8□□□□□ -2.12
XRN1-210ENST00000472697 MYH9P35579 1960 aaKnown RBP1.79□□□□□ -2.12
XRN1-210ENST00000472697 TRAV8-2A0A0B4J237 113 aa1.79□□□□□ -2.12
XRN1-210ENST00000472697 A0A1B0GTI1 187 aa1.79□□□□□ -2.12
XRN1-210ENST00000472697 SPAARA0A1B0GVQ0 90 aa1.79□□□□□ -2.12
XRN1-210ENST00000472697 PSMD12O00232 456 aaPredicted RBP1.79□□□□□ -2.12
XRN1-210ENST00000472697 COX7A2P2O60397 106 aa1.79□□□□□ -2.12
XRN1-210ENST00000472697 SERF1AO75920 110 aa1.79□□□□□ -2.12
XRN1-210ENST00000472697 ISG15P05161 165 aa1.79□□□□□ -2.12
XRN1-210ENST00000472697 ORM2P19652 201 aa1.79□□□□□ -2.12
XRN1-210ENST00000472697 CCNE1P24864 410 aa1.79□□□□□ -2.12
XRN1-210ENST00000472697 DAPP51397 102 aa1.79□□□□□ -2.12
XRN1-210ENST00000472697 AP2S1P53680 142 aaPredicted RBP1.79□□□□□ -2.12
XRN1-210ENST00000472697 PSG4Q00888 419 aa1.79□□□□□ -2.12
XRN1-210ENST00000472697 TMEM267Q0VDI3 215 aaPredicted RBP1.79□□□□□ -2.12
XRN1-210ENST00000472697 MED21Q13503 144 aa1.79□□□□□ -2.12
XRN1-210ENST00000472697 CLLU1OSQ5K130 101 aa1.79□□□□□ -2.12
XRN1-210ENST00000472697 LCE1AQ5T7P2 110 aa1.79□□□□□ -2.12
XRN1-210ENST00000472697 Q6ZRU5 148 aa1.79□□□□□ -2.12
XRN1-210ENST00000472697 TCF23Q7RTU1 214 aa1.79□□□□□ -2.12
XRN1-210ENST00000472697 NEGR1Q7Z3B1 354 aa1.79□□□□□ -2.12
XRN1-210ENST00000472697 CALHM3Q86XJ0 350 aa1.79□□□□□ -2.12
XRN1-210ENST00000472697 SAXO1Q8IYX7 474 aa1.79□□□□□ -2.12
XRN1-210ENST00000472697 STK40Q8N2I9 435 aa1.79□□□□□ -2.12
XRN1-210ENST00000472697 WDSUB1Q8N9V3 476 aa1.79□□□□□ -2.12
XRN1-210ENST00000472697 OR10X1Q8NGY0 326 aa1.79□□□□□ -2.12
XRN1-210ENST00000472697 OR5W2Q8NH69 310 aa1.79□□□□□ -2.12
XRN1-210ENST00000472697 LMX1AQ8TE12 382 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms