RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 CNEP1R1Q8N9A8 125 aa1.58□□□□□ -2.16
CLK1-209ENST00000472679 SPERTQ8NA61 448 aa1.58□□□□□ -2.16
CLK1-209ENST00000472679 MS4A12Q9NXJ0 267 aa1.58□□□□□ -2.16
CLK1-209ENST00000472679 C2orf74A8MZ97 194 aa1.57□□□□□ -2.16
CLK1-209ENST00000472679 SMLR1H3BR10 107 aa1.57□□□□□ -2.16
CLK1-209ENST00000472679 YKT6O15498 198 aa1.57□□□□□ -2.16
CLK1-209ENST00000472679 IGHV1-69P01742 117 aa1.57□□□□□ -2.16
CLK1-209ENST00000472679 GRPRP30550 384 aa1.57□□□□□ -2.16
CLK1-209ENST00000472679 XCL1P47992 114 aa1.57□□□□□ -2.16
CLK1-209ENST00000472679 RAP1GDS1P52306 607 aa1.57□□□□□ -2.16
CLK1-209ENST00000472679 TAS2R45P59539 299 aa1.57□□□□□ -2.16
CLK1-209ENST00000472679 DAD1P61803 113 aa1.57□□□□□ -2.16
CLK1-209ENST00000472679 ZNF90Q03938 601 aa1.57□□□□□ -2.16
CLK1-209ENST00000472679 ZNHIT3Q15649 155 aaPredicted RBP1.57□□□□□ -2.16
CLK1-209ENST00000472679 USF2Q15853 346 aaPredicted RBP1.57□□□□□ -2.16
CLK1-209ENST00000472679 NATD1Q8N6N6 113 aa1.57□□□□□ -2.16
CLK1-209ENST00000472679 ATP6V1C2Q8NEY4 427 aa1.57□□□□□ -2.16
CLK1-209ENST00000472679 SMIM12Q96EX1 92 aa1.57□□□□□ -2.16
CLK1-209ENST00000472679 MIEN1Q9BRT3 115 aa1.57□□□□□ -2.16
CLK1-209ENST00000472679 MRPL32Q9BYC8 188 aaKnown RBP1.57□□□□□ -2.16
CLK1-209ENST00000472679 CHMP5Q9NZZ3 219 aa1.57□□□□□ -2.16
CLK1-209ENST00000472679 FAM215AQ9Y5M1 114 aa1.57□□□□□ -2.16
CLK1-209ENST00000472679 FLG2Q5D862 2391 aaPredicted RBP1.57□□□□□ -2.16
CLK1-209ENST00000472679 TMEM94Q12767 1356 aa1.57□□□□□ -2.16
CLK1-209ENST00000472679 NPATQ14207 1427 aa1.57□□□□□ -2.16
CLK1-209ENST00000472679 ZFHX2Q9C0A1 2572 aaPredicted RBP1.56□□□□□ -2.16
CLK1-209ENST00000472679 PSMG1O95456 288 aa1.56□□□□□ -2.16
CLK1-209ENST00000472679 CRYBA1P05813 215 aa1.56□□□□□ -2.16
CLK1-209ENST00000472679 OR10J1P30954 320 aa1.56□□□□□ -2.16
CLK1-209ENST00000472679 TMEM267Q0VDI3 215 aaPredicted RBP1.56□□□□□ -2.16
CLK1-209ENST00000472679 LCN8Q6JVE9 175 aa1.56□□□□□ -2.16
CLK1-209ENST00000472679 AMTNQ6UX39 209 aa1.56□□□□□ -2.16
CLK1-209ENST00000472679 OR5AK3PQ8NH89 298 aa1.56□□□□□ -2.16
CLK1-209ENST00000472679 OR7D2Q96RA2 312 aa1.56□□□□□ -2.16
CLK1-209ENST00000472679 MED10Q9BTT4 135 aa1.56□□□□□ -2.16
CLK1-209ENST00000472679 SPZ1Q9BXG8 430 aa1.56□□□□□ -2.16
CLK1-209ENST00000472679 SLC2A9Q9NRM0 540 aa1.56□□□□□ -2.16
CLK1-209ENST00000472679 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.56□□□□□ -2.16
CLK1-209ENST00000472679 TRGV2A0A075B6R0 118 aa1.55□□□□□ -2.16
CLK1-209ENST00000472679 RFPL4AA6NLU0 287 aa1.55□□□□□ -2.16
CLK1-209ENST00000472679 RFPL4AL1F8VTS6 287 aa1.55□□□□□ -2.16
CLK1-209ENST00000472679 CDK9P50750 372 aaKnown RBP1.55□□□□□ -2.16
CLK1-209ENST00000472679 SLAMF1Q13291 335 aa1.55□□□□□ -2.16
CLK1-209ENST00000472679 C4orf26Q17RF5 130 aa1.55□□□□□ -2.16
CLK1-209ENST00000472679 DRAM2Q6UX65 266 aa1.55□□□□□ -2.16
CLK1-209ENST00000472679 RPS4Y2Q8TD47 263 aa1.55□□□□□ -2.16
CLK1-209ENST00000472679 ACBD6Q9BR61 282 aa1.55□□□□□ -2.16
CLK1-209ENST00000472679 EIF5A2Q9GZV4 153 aaKnown RBP1.55□□□□□ -2.16
CLK1-209ENST00000472679 OR52A5Q9H2C5 316 aa1.55□□□□□ -2.16
CLK1-209ENST00000472679 C1orf109Q9NX04 203 aa1.55□□□□□ -2.16
CLK1-209ENST00000472679 PUS1Q9Y606 427 aaKnown RBP eCLIP1.55□□□□□ -2.16
CLK1-209ENST00000472679 TMSB15BA0A087X1C1 80 aa1.54□□□□□ -2.16
CLK1-209ENST00000472679 METTL15A6NJ78 407 aa1.54□□□□□ -2.16
CLK1-209ENST00000472679 A8MUN3 132 aa1.54□□□□□ -2.16
CLK1-209ENST00000472679 GOLGA8RI6L899 631 aa1.54□□□□□ -2.16
CLK1-209ENST00000472679 GSTZ1O43708 216 aaPredicted RBP1.54□□□□□ -2.16
CLK1-209ENST00000472679 ARL14EPLP0DKL9 152 aa1.54□□□□□ -2.16
CLK1-209ENST00000472679 CA7P43166 264 aa1.54□□□□□ -2.16
CLK1-209ENST00000472679 ERHP84090 104 aaKnown RBP1.54□□□□□ -2.16
CLK1-209ENST00000472679 SMAGPQ0VAQ4 97 aa1.54□□□□□ -2.16
CLK1-209ENST00000472679 FAM45BPQ6NSW5 357 aa1.54□□□□□ -2.16
CLK1-209ENST00000472679 LHFPL1Q86WI0 220 aa1.54□□□□□ -2.16
CLK1-209ENST00000472679 COA5Q86WW8 74 aa1.54□□□□□ -2.16
CLK1-209ENST00000472679 C1orf174Q8IYL3 243 aa1.54□□□□□ -2.16
CLK1-209ENST00000472679 STOML3Q8TAV4 291 aa1.54□□□□□ -2.16
CLK1-209ENST00000472679 PPCDCQ96CD2 204 aa1.54□□□□□ -2.16
CLK1-209ENST00000472679 SLC35G5Q96KT7 338 aa1.54□□□□□ -2.16
CLK1-209ENST00000472679 NKX6-2Q9C056 277 aaPredicted RBP1.54□□□□□ -2.16
CLK1-209ENST00000472679 ZNF532Q9HCE3 1301 aa1.54□□□□□ -2.16
CLK1-209ENST00000472679 CHD5Q8TDI0 1954 aa1.54□□□□□ -2.16
CLK1-209ENST00000472679 A0A1W2PQD3 144 aa1.53□□□□□ -2.16
CLK1-209ENST00000472679 ZNF705FA8MVS1 300 aaPredicted RBP1.53□□□□□ -2.16
CLK1-209ENST00000472679 UBE2L6O14933 153 aa1.53□□□□□ -2.16
CLK1-209ENST00000472679 NDUFS6O75380 124 aaKnown RBP1.53□□□□□ -2.16
CLK1-209ENST00000472679 CFL1P23528 166 aaKnown RBP1.53□□□□□ -2.16
CLK1-209ENST00000472679 LRPPRCP42704 1394 aaKnown RBP1.53□□□□□ -2.16
CLK1-209ENST00000472679 KRTAP10-4P60372 401 aaPredicted RBP1.53□□□□□ -2.16
CLK1-209ENST00000472679 SPATA12Q7Z6I5 190 aa1.53□□□□□ -2.16
CLK1-209ENST00000472679 LRRC28Q86X40 367 aaPredicted RBP1.53□□□□□ -2.16
CLK1-209ENST00000472679 CRLF3Q8IUI8 442 aa1.53□□□□□ -2.16
CLK1-209ENST00000472679 RIBC1Q8N443 379 aaPredicted RBP1.53□□□□□ -2.16
CLK1-209ENST00000472679 OR2D3Q8NGH3 330 aa1.53□□□□□ -2.16
CLK1-209ENST00000472679 OR52E4Q8NGH9 312 aa1.53□□□□□ -2.16
CLK1-209ENST00000472679 CLDND2Q8NHS1 167 aa1.53□□□□□ -2.16
CLK1-209ENST00000472679 TLCD1Q96CP7 247 aa1.53□□□□□ -2.16
CLK1-209ENST00000472679 METTL9Q9H1A3 318 aa1.53□□□□□ -2.16
CLK1-209ENST00000472679 DOK5Q9P104 306 aa1.53□□□□□ -2.16
CLK1-209ENST00000472679 CUL9Q8IWT3 2517 aa1.52□□□□□ -2.17
CLK1-209ENST00000472679 NUMA1Q14980 2115 aa1.52□□□□□ -2.17
CLK1-209ENST00000472679 KIAA2026Q5HYC2 2103 aa1.52□□□□□ -2.17
CLK1-209ENST00000472679 WDR90Q96KV7 1748 aa1.52□□□□□ -2.17
CLK1-209ENST00000472679 TRAV41A0A0B4J266 112 aa1.52□□□□□ -2.17
CLK1-209ENST00000472679 DAPL1A0PJW8 107 aa1.52□□□□□ -2.17
CLK1-209ENST00000472679 COPEO14579 308 aa1.52□□□□□ -2.17
CLK1-209ENST00000472679 NAPSAO96009 420 aa1.52□□□□□ -2.17
CLK1-209ENST00000472679 ATP5G1P05496 136 aa1.52□□□□□ -2.17
CLK1-209ENST00000472679 BPGMP07738 259 aa1.52□□□□□ -2.17
CLK1-209ENST00000472679 LYNX1P0DP58 116 aa1.52□□□□□ -2.17
CLK1-209ENST00000472679 F8A1P23610 371 aa1.52□□□□□ -2.17
CLK1-209ENST00000472679 CRATP43155 626 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms